ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrins... 361 9e-97
2gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, comp... 113 3e-22
3ref|NM_187092.2| Oryza sativa (japonica cultivar-group), mRNA 105 8e-20
4ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group... 105 8e-20
5ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group... 105 8e-20
6gb|BT016583.1| Zea mays clone Contig416 mRNA sequence 105 8e-20
7gb|AY243801.1| Zea mays aquaporin (PIP2-1) mRNA, complete cds 105 8e-20
8dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 105 8e-20
9dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA ... 105 8e-20
10dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 105 8e-20
11dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 8e-20
12dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 8e-20
13dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 8e-20
14dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 8e-20
15gb|AF326492.1|AF326492 Zea mays plasma membrane integral protein... 98 2e-17
16gb|AF326491.1|AF326491 Zea mays plasma membrane integral protein... 98 2e-17
17dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
18gb|AY109332.1| Zea mays CL502_5 mRNA sequence 98 2e-17
19ref|XM_475029.1| Oryza sativa (japonica cultivar-group), predic... 50 0.004
20emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4,... 50 0.004
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
22dbj|AK102155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
23dbj|AK061491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
24dbj|AK061312.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
25gb|AY903443.1| Astragalus membranaceus clone AM79 putative plasm... 48 0.017
26dbj|AK119661.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.065
27ref|NM_187081.2| Oryza sativa (japonica cultivar-group), mRNA 40 4.0
28emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on ch... 40 4.0
29gb|AF154641.1| Nicotiana tabacum clone PR16 mRNA sequence 40 4.0
30dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.0
31dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.0
32emb|AL844210.7| Mouse DNA sequence from clone RP23-235I13 on chr... 40 4.0

>gb|AF139814.1|AF139814 Triticum aestivum plasma membrane intrinsic protein 1 (PIP1) mRNA,
            complete cds
          Length = 1283

 Score =  361 bits (182), Expect = 9e-97
 Identities = 282/310 (90%), Gaps = 9/310 (2%)
 Strand = Plus / Minus

                                                                        
Query: 6    aggaaaaggaatggggggtaattaagacaagcgatcccatggaccgaattacaacacacg 65
            |||||||| |||| ||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1189 aggaaaagcaatgcgggctaattaagacaagcgatcccatggaccgaattacaagacacg 1130

                                                                        
Query: 66   gcacgcatgactgggc-acatac---gcatatgcagctgccgacacataaataacacgac 121
            ||||||||||| || | || |||   |||||||||||||||||||||||| |||||||||
Sbjct: 1129 gcacgcatgaccggaccacgtactacgcatatgcagctgccgacacataa-taacacgac 1071

                                                                        
Query: 122  cattgcagcggcc-aactgaactgtcgagaagttgcaaaagcggctttctctttggatgg 180
            |||||| |||||| |||||||||||||||||||||||||||||  ||||||| |||||||
Sbjct: 1070 cattgcggcggccgaactgaactgtcgagaagttgcaaaagcgcatttctctctggatgg 1011

                                                                        
Query: 181  atggacacagcacaggtcgccattgcttcaatcttgcatgcacatcacatggat---aac 237
            ||||||||| ||| |||||||||||||||| |||||||| || || ||||||||   |||
Sbjct: 1010 atggacacaacacgggtcgccattgcttcagtcttgcatacagatgacatggatgataac 951

                                                                        
Query: 238  tcgttacgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgta 297
            | |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 950  ttgttacgcgttgctcctgaaggagccgagggccttgatggcgccggccctgaggatgta 891

                      
Query: 298  ctggtggtag 307
            ||||||||||
Sbjct: 890  ctggtggtag 881



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>gb|AF062393.1|AF062393 Oryza sativa aquaporin (PIP2a) mRNA, complete cds
          Length = 1328

 Score =  113 bits (57), Expect = 3e-22
 Identities = 63/65 (96%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 968 acgcgttgctcctgaaggagccgagggccttgatggcgccggcccggaggatgtactggt 909

                
Query: 303 ggtag 307
           |||||
Sbjct: 908 ggtag 904



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>ref|NM_187092.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1242

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 978 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 919

                
Query: 303 ggtag 307
           |||||
Sbjct: 918 ggtag 914



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>ref|XM_507363.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117
           mRNA
          Length = 1257

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 980 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 921

                
Query: 303 ggtag 307
           |||||
Sbjct: 920 ggtag 916



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>ref|XM_506304.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1047_A06.117
           mRNA
          Length = 1298

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 981 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 922

                
Query: 303 ggtag 307
           |||||
Sbjct: 921 ggtag 917



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>gb|BT016583.1| Zea mays clone Contig416 mRNA sequence
          Length = 1348

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 924 acgcgttgctcctgaaggagccgagggccttgatggcgccagcccggaggatgtactggt 865

                
Query: 303 ggtag 307
           |||||
Sbjct: 864 ggtag 860



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>gb|AY243801.1| Zea mays aquaporin (PIP2-1) mRNA, complete cds
          Length = 1133

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct: 872 acgcgttgctcctgaaggagccgagggccttgatggcgccagcccggaggatgtactggt 813

                
Query: 303 ggtag 307
           |||||
Sbjct: 812 ggtag 808



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                            
Query: 243      acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
                |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 15355852 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 15355793

                     
Query: 303      ggtag 307
                |||||
Sbjct: 15355792 ggtag 15355788



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 242      tacgcgttgctcctgaaggagccg 265
                ||||||||||||| ||||||||||
Sbjct: 15306551 tacgcgttgctccggaaggagccg 15306528



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>dbj|AB029446.1| Oryza sativa (indica cultivar-group) rwc-2 mRNA for water channel
           protein, partial cds
          Length = 880

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||
Sbjct: 544 acgcgttgctcctgaaggagccgagggccttgatggggccggcccggaggatgtactggt 485

                
Query: 303 ggtag 307
           |||||
Sbjct: 484 ggtag 480



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>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                         
Query: 243   acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
             |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 62851 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 62792

                  
Query: 303   ggtag 307
             |||||
Sbjct: 62791 ggtag 62787



 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   tacgcgttgctcctgaaggagccg 265
             ||||||||||||| ||||||||||
Sbjct: 13550 tacgcgttgctccggaaggagccg 13527



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>dbj|AK119656.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-H04, full
           insert sequence
          Length = 1216

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 978 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 919

                
Query: 303 ggtag 307
           |||||
Sbjct: 918 ggtag 914



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>dbj|AK105524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-G02, full
           insert sequence
          Length = 1451

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 572 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 513

                
Query: 303 ggtag 307
           |||||
Sbjct: 512 ggtag 508



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>dbj|AK103970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B05, full
           insert sequence
          Length = 1242

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 978 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 919

                
Query: 303 ggtag 307
           |||||
Sbjct: 918 ggtag 914



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>dbj|AK072519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023128K12, full
           insert sequence
          Length = 1298

 Score =  105 bits (53), Expect = 8e-20
 Identities = 62/65 (95%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 981 acgcgttgctcctgaaggagccgagggctttgatggcgccggcccggaggatgtactggt 922

                
Query: 303 ggtag 307
           |||||
Sbjct: 921 ggtag 917



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>gb|AF326492.1|AF326492 Zea mays plasma membrane integral protein ZmPIP2-2 mRNA, complete
           cds
          Length = 1268

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||
Sbjct: 996 acgcgttgctcctgaaggagccgagagccttgatggcgcccgcccggaggatgtactggt 937

                
Query: 303 ggtag 307
           |||||
Sbjct: 936 ggtag 932



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>gb|AF326491.1|AF326491 Zea mays plasma membrane integral protein ZmPIP2-1 mRNA, complete
           cds
          Length = 1171

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           ||||||||||||||||||||||||||||||||||||| || |||| ||| ||||||||||
Sbjct: 943 acgcgttgctcctgaaggagccgagggccttgatggccccagcccggaggatgtactggt 884

                
Query: 303 ggtag 307
           |||||
Sbjct: 883 ggtag 879



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>dbj|AK103938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G03, full
           insert sequence
          Length = 1257

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                       
Query: 243 acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
           ||||||||||||||| |||||||||||| |||||||||||||||| ||| ||||||||||
Sbjct: 980 acgcgttgctcctgagggagccgagggctttgatggcgccggcccggaggatgtactggt 921

                
Query: 303 ggtag 307
           |||||
Sbjct: 920 ggtag 916



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>gb|AY109332.1| Zea mays CL502_5 mRNA sequence
          Length = 1969

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 61/65 (93%)
 Strand = Plus / Minus

                                                                        
Query: 243  acgcgttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggt 302
            ||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||||||||
Sbjct: 1646 acgcgttgctcctgaaggagccgagagccttgatggcgcccgcccggaggatgtactggt 1587

                 
Query: 303  ggtag 307
            |||||
Sbjct: 1586 ggtag 1582



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>ref|XM_475029.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 849

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 247 gttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtg 303
           |||||||| ||||||||| || |||||||||||  | |||| ||| |||||||||||
Sbjct: 837 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgtactggtg 781



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>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06,
             complete sequence
          Length = 127420

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                      
Query: 247   gttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtg 303
             |||||||| ||||||||| || |||||||||||  | |||| ||| |||||||||||
Sbjct: 91012 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgtactggtg 91068



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                        
Query: 247     gttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtg 303
               |||||||| ||||||||| || |||||||||||  | |||| ||| |||||||||||
Sbjct: 8906703 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgtactggtg 8906759



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>dbj|AK102155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086E18, full
           insert sequence
          Length = 1308

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 247 gttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtg 303
           |||||||| ||||||||| || |||||||||||  | |||| ||| |||||||||||
Sbjct: 936 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgtactggtg 880



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>dbj|AK061491.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B05, full
           insert sequence
          Length = 1309

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 247 gttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtg 303
           |||||||| ||||||||| || |||||||||||  | |||| ||| |||||||||||
Sbjct: 930 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgtactggtg 874



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>dbj|AK061312.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B10, full
           insert sequence
          Length = 1296

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 49/57 (85%)
 Strand = Plus / Minus

                                                                    
Query: 247 gttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtg 303
           |||||||| ||||||||| || |||||||||||  | |||| ||| |||||||||||
Sbjct: 924 gttgctccggaaggagcccagcgccttgatggctgccgcccggaggatgtactggtg 868



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>gb|AY903443.1| Astragalus membranaceus clone AM79 putative plasma membrane
           intrinsic protein mRNA, complete cds
          Length = 1120

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 248 ttgctcctgaaggagccgagggccttgatggc 279
           |||||||||||||| ||||| |||||||||||
Sbjct: 839 ttgctcctgaaggatccgagagccttgatggc 808



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>dbj|AK119661.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B01, full
           insert sequence
          Length = 1067

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 249 tgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtg 303
           |||||| ||||||||| || |||||||||||  | |||| ||| |||||||||||
Sbjct: 821 tgctccggaaggagcccagcgccttgatggctgccgcccggaggatgtactggtg 767



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>ref|NM_187081.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1215

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 242 tacgcgttgctcctgaaggagccg 265
           ||||||||||||| ||||||||||
Sbjct: 954 tacgcgttgctccggaaggagccg 931



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>emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on chromosome 11 Contains the
             3' end of the Ulk2 gene for Unc-51 like kinase 2 (C.
             elegans), the Prpsap2 gene for phosphoribosyl
             pyrophosphate synthetase-associated protein 2, the gene
             for a novel sodium/glucose cotransporter protein, the gene
             for a novel protein (2310040C09Rik), the Grap gene for
             GRB2-related adaptor protein and a CpG island, complete
             sequence
          Length = 186359

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   tttctctttggatggatgga 185
             ||||||||||||||||||||
Sbjct: 79799 tttctctttggatggatgga 79818



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>gb|AF154641.1| Nicotiana tabacum clone PR16 mRNA sequence
          Length = 1100

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 248 ttgctcctgaaggagccgagggccttgatggcgccggccctgagtatgtactggtggtag 307
           |||||||||||||| || || || |||||||| || || | ||| ||| |||||||||||
Sbjct: 900 ttgctcctgaaggaaccaagagctttgatggcaccagcacggaggatgaactggtggtag 841



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>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0475E07
          Length = 139961

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 242   tacgcgttgctcctgaaggagccg 265
             ||||||||||||| ||||||||||
Sbjct: 92564 tacgcgttgctccggaaggagccg 92541



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>dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132K03, full
           insert sequence
          Length = 1215

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 242 tacgcgttgctcctgaaggagccg 265
           ||||||||||||| ||||||||||
Sbjct: 954 tacgcgttgctccggaaggagccg 931



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>emb|AL844210.7| Mouse DNA sequence from clone RP23-235I13 on chromosome X, complete
              sequence
          Length = 140246

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      ggaaaaggaatggggggtaa 26
              ||||||||||||||||||||
Sbjct: 119991 ggaaaaggaatggggggtaa 119972


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,653,440
Number of Sequences: 3902068
Number of extensions: 2653440
Number of successful extensions: 42413
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42341
Number of HSP's gapped (non-prelim): 69
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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