ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart60e09 |
|---|---|
| Clone Library Name | barley_pub |
>BOLA2_HUMAN (Q9H3K6) BolA-like protein 2| Length = 86 Score = 41.6 bits (96), Expect = 5e-04 Identities = 20/34 (58%), Positives = 23/34 (67%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALAPLMAEIHAVSIKALT 227 KFEGK LL+RHR+VN LA + IHA K LT Sbjct: 43 KFEGKPLLQRHRLVNACLAEELPHIHAFEQKTLT 76
>BOLA2_MOUSE (Q8BGS2) BolA-like protein 2| Length = 86 Score = 41.2 bits (95), Expect = 7e-04 Identities = 20/34 (58%), Positives = 23/34 (67%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALAPLMAEIHAVSIKALT 227 KFEGK LL+RHR+VN LA + IHA K LT Sbjct: 43 KFEGKPLLQRHRLVNECLAEELPHIHAFEQKTLT 76
>YN1I_CAEEL (P91375) Hypothetical bolA-like protein K11H12.1 in chromosome IV| Length = 108 Score = 40.0 bits (92), Expect = 0.001 Identities = 19/34 (55%), Positives = 26/34 (76%), Gaps = 1/34 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALA-PLMAEIHAVSIKAL 230 +FEGKR++ERHR+VNT LA L +HA+ I A+ Sbjct: 53 EFEGKRVIERHRLVNTCLAKELATTVHALRIDAI 86
>HAGA2_PORGI (Q51845) Hemagglutinin A precursor| Length = 2628 Score = 34.3 bits (77), Expect = 0.080 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 1616 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 1661 Score = 34.3 bits (77), Expect = 0.080 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 1160 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 1205 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 2072 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVASFSWNGMALNPDN 2117 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 704 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVASFSWNGMALNPDN 749
>HAGA1_PORGI (P59915) Hemagglutinin A precursor| Length = 2164 Score = 34.3 bits (77), Expect = 0.080 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 1608 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 1653 Score = 34.3 bits (77), Expect = 0.080 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 704 TTIDADGDGQGWLCLSSGQL---GWLTAHGGTNVVASFSWNGMALNPDN 749 Score = 33.5 bits (75), Expect = 0.14 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 1156 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVASFSWNGMALNPDN 1201
>PRTH_PORGI (P46071) Protease prtH (EC 3.4.22.-)| Length = 989 Score = 33.1 bits (74), Expect = 0.18 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = +3 Query: 180 SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 + + A GDG GW C L W++A G + V + W + P N Sbjct: 109 TTIDADGDGQGWLCLSSGQL---DWLTAHGGTNVVSSFSWNGMALNPDN 154
>BOLA1_PONPY (Q5RCE5) BolA-like protein 1| Length = 137 Score = 32.7 bits (73), Expect = 0.23 Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALA-PLMAEIHAVSIKALT 227 +FEG L+RHR+++ ALA L +HA++I+A T Sbjct: 76 RFEGLSPLQRHRLIHAALAEELAGPVHALAIQART 110
>BOLA1_HUMAN (Q9Y3E2) BolA-like protein 1| Length = 137 Score = 32.3 bits (72), Expect = 0.30 Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALA-PLMAEIHAVSIKALT 227 +FEG L+RHR+V+ ALA L +HA++I+A T Sbjct: 76 RFEGLSPLQRHRLVHAALAEELGGPVHALAIQART 110
>BOLA1_MOUSE (Q9D8S9) BolA-like protein 1| Length = 137 Score = 32.0 bits (71), Expect = 0.40 Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALA-PLMAEIHAVSIKALT 227 +FEG L+RHR+V+ AL+ L +HA++I+A T Sbjct: 76 RFEGMSPLQRHRLVHEALSEELAGPVHALAIQAKT 110
>YGX0_YEAST (P53082) Protein YGL220w| Length = 120 Score = 30.8 bits (68), Expect = 0.89 Identities = 16/33 (48%), Positives = 19/33 (57%) Frame = -1 Query: 325 FEGKRLLERHRMVNTALAPLMAEIHAVSIKALT 227 F+GK L R R VN A+ + EIHA S K T Sbjct: 79 FQGKSKLMRSRAVNKAVKEELQEIHAFSCKCYT 111
>BOLA_SHIFL (P0ABE4) Protein bolA| Length = 105 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALA-PLMAEIHAVSIKALT 227 +F G+R L RHRM+ + LA L +HA+++ T Sbjct: 47 RFTGERFLNRHRMIYSTLAEELSTTVHALALHTYT 81
>BOLA_ECOLI (P0ABE2) Protein bolA| Length = 105 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALA-PLMAEIHAVSIKALT 227 +F G+R L RHRM+ + LA L +HA+++ T Sbjct: 47 RFTGERFLNRHRMIYSTLAEELSTTVHALALHTYT 81
>BOLA_ECOL6 (P0ABE3) Protein bolA| Length = 105 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALA-PLMAEIHAVSIKALT 227 +F G+R L RHRM+ + LA L +HA+++ T Sbjct: 47 RFTGERFLNRHRMIYSTLAEELSTTVHALALHTYT 81
>PO2F1_XENLA (P16143) POU domain, class 2, transcription factor 1| (Octamer-binding transcription factor 1) (Oct-1) (OTF-1) (NF-A1) (XOct1) Length = 760 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = +3 Query: 48 PLQSLDSAGAALLHYSFIHSSREYCMMRVSQHPTNASLGASQALSAVTAG 197 P+ S + G ++ S IH++ + +Q PTNASL A A + + G Sbjct: 571 PMTSSLNTGQVMVTASGIHTAAATALQGAAQLPTNASLAAMAAAAGLNPG 620
>BOLA_VIBCH (Q9KPS0) Protein bolA| Length = 106 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALAPLMA-EIHAVSIKALT 227 +F G R + RHR+VN LA +A IHA++I T Sbjct: 46 RFAGLRPVARHRLVNQTLADELANHIHALAIHTYT 80
>R1AB_BEV (P18458) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (Pol); Helicase (Hel)] (Fragment) Length = 2291 Score = 29.3 bits (64), Expect = 2.6 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 37 NVCHHCRVSIPQARHCYIIHSFIQAESTV 123 +VC C V +P +CY +H I S V Sbjct: 860 SVCEECYVPLPLCAYCYYVHVVISNHSKV 888
>UPC2_YEAST (Q12151) Sterol uptake control protein 2 (Mannoprotein regulation| by oxygen protein 4) Length = 913 Score = 29.3 bits (64), Expect = 2.6 Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 3/67 (4%) Frame = +3 Query: 123 MMRVSQHPTNASLGASQAL---SAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTI 293 ++ +S++ T+A + ++ L S A G+G S ++++ +AWI + GA+ +LT Sbjct: 687 VLEISENNTDALVASALILIMDSLANASGNGTVGNQS-LNSMSPSAWIFHVKGAATILTA 745 Query: 294 RWRSSSR 314 W S R Sbjct: 746 VWPLSER 752
>GLNE_STRAW (Q81ZW1) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 1000 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/32 (34%), Positives = 21/32 (65%) Frame = +3 Query: 231 SALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 +A+++ AW+ A +AV+ +R R+ FPS+ Sbjct: 926 AAILDEAWVLATRVRNAVMLVRGRAGDTFPSD 957
>Y812_RICPR (Q9ZCE4) Hypothetical protein RP812| Length = 77 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/35 (31%), Positives = 25/35 (71%), Gaps = 1/35 (2%) Frame = -1 Query: 328 KFEGKRLLERHRMVNTALAPLM-AEIHAVSIKALT 227 +F G L+ +H++V AL+ ++ ++H++SIK ++ Sbjct: 41 QFNGLSLINQHKLVKNALSEILNKKLHSISIKTIS 75
>ADH1_GADCA (P26325) Alcohol dehydrogenase 1 (EC 1.1.1.1)| Length = 375 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = +3 Query: 141 HPTNASLGASQALSAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRW 299 +P + S SQ LS +T GG + C G +M A S + G + + W Sbjct: 243 NPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGW 295
>GLNE_STRCO (Q8CK02) Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)| ([Glutamate--ammonia-ligase] adenylyltransferase) (Glutamine-synthetase adenylyltransferase) (ATase) Length = 999 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/58 (27%), Positives = 30/58 (51%) Frame = +3 Query: 153 ASLGASQALSAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIRWRSSSRFPSN 326 A L ++ +A+ A D G +A ++ AW+ A +AV+ +R R+ FP++ Sbjct: 901 AGLRTTRTRTALAAARDA-GLISEEHTATLDEAWVLATRVRNAVMLVRGRAGDTFPTD 957
>BOLA_VIBAL (Q56585) Protein bolA homolog| Length = 102 Score = 28.1 bits (61), Expect = 5.7 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Frame = -1 Query: 325 FEGKRLLERHRMVNTALA-PLMAEIHAVSIKALT 227 F G+RL+ RHR V+ LA L IHA++I T Sbjct: 47 FAGQRLIGRHRQVHQILADELDNHIHALAIHTYT 80
>IRBP_MOUSE (P49194) Interphotoreceptor retinoid-binding protein precursor| (IRBP) (Interstitial retinol-binding protein) Length = 1234 Score = 27.3 bits (59), Expect = 9.8 Identities = 18/57 (31%), Positives = 29/57 (50%) Frame = +3 Query: 126 MRVSQHPTNASLGASQALSAVTAGGDGWGWACSGVSALMETAWISAMSGASAVLTIR 296 +R+ Q ++ S++L + GG G W SGV + T A+ A A+LT+R Sbjct: 269 LRIGQSNFFLTVPVSRSLGPL--GGGGQTWEGSGVLPCVGTPAEQALEKALAILTLR 323
>JJAZ_MOUSE (Q80U70) Polycomb protein Suz12 (Suppressor of zeste 12 protein| homolog) Length = 741 Score = 27.3 bits (59), Expect = 9.8 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%) Frame = +3 Query: 162 GASQALSAVTAGGDGWGWACSG---VSALMETAWISAMSGASAVLTIR 296 G++ A++A +GG G C G SA +A +A + +AVL ++ Sbjct: 27 GSAAAVAAAASGGKSGGGGCGGGGSYSASSSSAAAAAAAAGAAVLPVK 74
>SELD_DESVH (Q72CF1) Selenide, water dikinase (EC 2.7.9.3) (Selenophosphate| synthetase) (Selenium donor protein) Length = 351 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +3 Query: 102 HSSREYCMMRVSQHPTNASLGASQALSAVTAGG 200 H++R +C VS HP SL A T+GG Sbjct: 275 HANRHFCSGNVSVHPEVDSLLVDIVFDAQTSGG 307 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,600,500 Number of Sequences: 219361 Number of extensions: 495227 Number of successful extensions: 1978 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 1941 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1968 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
