>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                           
Query: 280     gcttcttgcaggctggacacggccttgtcgtacatcaggaaacccatgaaccagaactca 339
               |||||||| |||||  ||||||| ||||| |||||||| |||||||||||||||||||| 
Sbjct: 6045844 gcttcttggaggctacacacggctttgtcatacatcagaaaacccatgaaccagaactcg 6045785

                                                                  
Query: 340     tgcccttcaacagagacaacctgaatatacttttcagcgggatttactttg 390
               || |||||||| || ||||||||||||||||||||||| || |||||||||
Sbjct: 6045784 tggccttcaactgaaacaacctgaatatacttttcagcagggtttactttg 6045734

>dbj|AP005425.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0644A02
          Length = 144954

 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                         
Query: 280   gcttcttgcaggctggacacggccttgtcgtacatcaggaaacccatgaaccagaactca 339
             |||||||| |||||  ||||||| ||||| |||||||| |||||||||||||||||||| 
Sbjct: 50343 gcttcttggaggctacacacggctttgtcatacatcagaaaacccatgaaccagaactcg 50284

                                                                
Query: 340   tgcccttcaacagagacaacctgaatatacttttcagcgggatttactttg 390
             || |||||||| || ||||||||||||||||||||||| || |||||||||
Sbjct: 50283 tggccttcaactgaaacaacctgaatatacttttcagcagggtttactttg 50233

>dbj|AK058667.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-G11, full
           insert sequence
          Length = 1114

 Score =  125 bits (63), Expect = 1e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                       
Query: 280 gcttcttgcaggctggacacggccttgtcgtacatcaggaaacccatgaaccagaactca 339
           |||||||| |||||  ||||||| ||||| |||||||| |||||||||||||||||||| 
Sbjct: 794 gcttcttggaggctacacacggctttgtcatacatcagaaaacccatgaaccagaactcg 735

                                                              
Query: 340 tgcccttcaacagagacaacctgaatatacttttcagcgggatttactttg 390
           || |||||||| || ||||||||||||||||||||||| || |||||||||
Sbjct: 734 tggccttcaactgaaacaacctgaatatacttttcagcagggtttactttg 684

>gb|AY109890.1| Zea mays CL59593_1 mRNA sequence
          Length = 1044

 Score =  125 bits (63), Expect = 1e-25
 Identities = 122/139 (87%), Gaps = 2/139 (1%)
 Strand = Plus / Plus

                                                                       
Query: 253 ggttgcaactcacgagcacc-gtcaagtgcttcttgcaggctggacacggccttgtcgta 311
           |||||||||||||||||||  | |||| |||||||| || ||||   | |||||||||||
Sbjct: 223 ggttgcaactcacgagcactagccaag-gcttcttgaagactggctgcagccttgtcgta 281

                                                                       
Query: 312 catcaggaaacccatgaaccagaactcatgcccttcaacagagacaacctgaatatactt 371
           ||| || |||||||||||||||||||||||||||||||| || || |||||||| |||||
Sbjct: 282 cattagaaaacccatgaaccagaactcatgcccttcaacggaaacgacctgaatgtactt 341

                              
Query: 372 ttcagcgggatttactttg 390
            ||||||||||||||||||
Sbjct: 342 ctcagcgggatttactttg 360

>dbj|AP006716.1| Staphylococcus haemolyticus JCSC1435 DNA, complete genome
          Length = 2685015

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 60      gaacgcaaagaacaagaacaaaca 83
               ||||||||||||||||||||||||
Sbjct: 1010238 gaacgcaaagaacaagaacaaaca 1010261

>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence
          Length = 107205

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 318   gaaacccatgaaccagaactcatg 341
             ||||||||||||||||||||||||
Sbjct: 13594 gaaacccatgaaccagaactcatg 13571

>gb|BT018477.1| Zea mays clone EL01N0423H08.d mRNA sequence
          Length = 968

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 300 ggccttgtcgtacatcaggaaacccatgaaccagaact 337
           ||||||||||||  ||| ||| ||||||||||||||||
Sbjct: 690 ggccttgtcgtagttcacgaaccccatgaaccagaact 653

>gb|AC107761.9| Mus musculus chromosome 7, clone RP23-184M3, complete sequence
          Length = 216757

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    acaagaacaaacacgtataca 91
             |||||||||||||||||||||
Sbjct: 44293 acaagaacaaacacgtataca 44313

>gb|AC158124.6| Mus musculus chromosome 7, clone RP24-71O4, complete sequence
          Length = 156165

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    acaagaacaaacacgtataca 91
             |||||||||||||||||||||
Sbjct: 68781 acaagaacaaacacgtataca 68761

>gb|AC073964.3|AC073964 Homo sapiens chromosome 15 clone RP11-394B5 map 15q21.2, complete
             sequence
          Length = 189796

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    caaagaacaagaacaaacacg 85
             |||||||||||||||||||||
Sbjct: 85062 caaagaacaagaacaaacacg 85042

>gb|AY109749.1| Zea mays CL65073_1 mRNA sequence
          Length = 828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 318 gaaacccatgaaccagaactc 338
           |||||||||||||||||||||
Sbjct: 799 gaaacccatgaaccagaactc 779

>emb|AL117259.6|CNS01DRJ Human chromosome 14 DNA sequence BAC R-304M6 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 193301

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   ccctggggatgttacaggctg 222
             |||||||||||||||||||||
Sbjct: 10633 ccctggggatgttacaggctg 10653

>emb|AL132708.3|CNS01DTA Human chromosome 14 DNA sequence BAC R-349I1 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 147505

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 202    ccctggggatgttacaggctg 222
              |||||||||||||||||||||
Sbjct: 136724 ccctggggatgttacaggctg 136744

>gb|K02212.1|HUMA1ATP Human alpha-1-antitrypsin gene (S variant), complete cds
          Length = 12222

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 202   ccctggggatgttacaggctg 222
             |||||||||||||||||||||
Sbjct: 10621 ccctggggatgttacaggctg 10641

>ref|NM_120176.1| Arabidopsis thaliana unknown protein AT4G40100 mRNA, complete cds
          Length = 678

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 gaaacccatgaaccagaactcatg 341
           ||||||||||||||| ||||||||
Sbjct: 606 gaaacccatgaaccaaaactcatg 583

>ref|NM_187664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 cccatgaaccagaactcatg 341
           ||||||||||||||||||||
Sbjct: 722 cccatgaaccagaactcatg 703

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     cccatgaaccagaactcatg 341
               ||||||||||||||||||||
Sbjct: 4576207 cccatgaaccagaactcatg 4576188

>emb|Z12169.1|ATYPATT1 A.thaliana telomere associated sequence DNA
          Length = 503

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 318 gaaacccatgaaccagaactcatg 341
           ||||||||||||||| ||||||||
Sbjct: 62  gaaacccatgaaccaaaactcatg 39

>emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 92
          Length = 112067

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 318    gaaacccatgaaccagaactcatg 341
              ||||||||||||||| ||||||||
Sbjct: 111463 gaaacccatgaaccaaaactcatg 111440

>gb|AC079174.20| Homo sapiens 12 BAC RP11-651L5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87817

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 215   acaggctgaactgaaacttc 234
             ||||||||||||||||||||
Sbjct: 9999  acaggctgaactgaaacttc 10018

>emb|BX571698.15| Zebrafish DNA sequence from clone DKEYP-121E10 in linkage group 24,
             complete sequence
          Length = 168886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    caaagaacaagaacaaacac 84
             ||||||||||||||||||||
Sbjct: 49913 caaagaacaagaacaaacac 49894

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     cccatgaaccagaactcatg 341
               ||||||||||||||||||||
Sbjct: 4576322 cccatgaaccagaactcatg 4576303

>ref|NM_145722.1| Rattus norvegicus Bartomin (LOC252831), mRNA
          Length = 5352

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 334 aactcatgcccttcaacagagaca 357
           ||||||||||| ||||||||||||
Sbjct: 584 aactcatgcccatcaacagagaca 561

>dbj|AK068057.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130C18, full
           insert sequence
          Length = 1136

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 322 cccatgaaccagaactcatg 341
           ||||||||||||||||||||
Sbjct: 873 cccatgaaccagaactcatg 854

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 61      aacgcaaagaacaagaacaa 80
               ||||||||||||||||||||
Sbjct: 3184543 aacgcaaagaacaagaacaa 3184524

>emb|BX928749.12| Zebrafish DNA sequence from clone CH211-201A8 in linkage group 2,
             complete sequence
          Length = 215263

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   agacgctcagagcagaagac 178
             ||||||||||||||||||||
Sbjct: 16029 agacgctcagagcagaagac 16048

>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   cccatgaaccagaactcatg 341
             ||||||||||||||||||||
Sbjct: 17162 cccatgaaccagaactcatg 17143

>dbj|AB077475.1| Rattus norvegicus mRNA for barmotin, complete cds
          Length = 5352

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 334 aactcatgcccttcaacagagaca 357
           ||||||||||| ||||||||||||
Sbjct: 584 aactcatgcccatcaacagagaca 561


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,706,392
Number of Sequences: 3902068
Number of extensions: 2706392
Number of successful extensions: 52847
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52760
Number of HSP's gapped (non-prelim): 87
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)