>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)|
          Length = 262

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 17/20 (85%), Positives = 18/20 (90%)
 Frame = -3

Query: 360 HKTGEEDKAAAPSGEHKPRA 301
           HKTGEEDKAAA +GEHKP A
Sbjct: 243 HKTGEEDKAAAATGEHKPSA 262

>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 95  HPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS*HGLKLKANTTHA 250
           HP P S P+  P+    H HP P+ +  P  Q  S P   HG +L  +T+++
Sbjct: 213 HPHPHSHPHSHPHP---HPHPHPHQIPHPHPQPHSQP---HGHRLLRSTSNS 258

>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 83  KLKQHPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPS 211
           K +QHP P+     SP  Q   +HPSPN    P   ++  P S
Sbjct: 126 KQQQHPSPNQQQPPSPNQQ---QHPSPNQQQHPSPNQQQHPNS 165

>COBL6_ARATH (O04500) COBRA-like protein 6 precursor|
          Length = 454

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -3

Query: 144 SVWVYGLQFGPESGPGCCLSLFAYYYGHFV 55
           +V VY  QF     P CC+SL A+YY + V
Sbjct: 217 AVCVYS-QFRSSPSPKCCVSLSAFYYQNIV 245

>TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 54  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 167
           T    NN+   L+ +QD+ L Q  A +  ++ +I+HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAIQHLT 242

>ISPZ_HAEDU (Q7VKZ1) Probable intracellular septation protein|
          Length = 183

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -2

Query: 172 KPVR*RMLVFSLGIRASVWSRVR-SWMLFKFICLLLRAL 59
           KPV   +L   L +   VW+R+   W +F  IC+L+  +
Sbjct: 98  KPVVKMLLAKELSLPTQVWNRLNLGWAIFFIICMLINII 136

>ALU4_HUMAN (P39191) Alu subfamily SB2 sequence contamination warning entry|
          Length = 603

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -3

Query: 339 KAAAPSGEHKPRA*SPPCPETHHRTSIKLLACVVFALSLSPCQDG 205
           K   P   H P + SP    T  R   +L+ C+     +SPC  G
Sbjct: 430 KLRFPGSRHSPASASPVAGTTGARHRARLIFCIFSRDGVSPCXPG 474

>TRUB_LEGPL (Q5WT38) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 54  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 167
           T    NN+   L+ +QD+ L Q  A +  ++ +++HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAVQHLT 242

>TRUB_LEGPH (Q5ZRV6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 54  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 167
           T    NN+   L+ +QD+ L Q  A +  ++ +++HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAVQHLT 242

>ATM_NEUCR (Q7RZT9) Serine/threonine-protein kinase tel-1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase tel-1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2953

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 87   LNNIQDLTLDQTEARIPKLNTSIRHLTGFTDRTFKDDQSLHLDTDLNLK 233
            ++N+ +  LDQT+    KL+ +++     T    +D+Q L ++T L L+
Sbjct: 1798 VHNVLEYELDQTQGMKQKLSEALKEWLTSTSPAARDNQKLLINTILYLR 1846

>FREM2_MOUSE (Q6NVD0) FRAS1-related extracellular matrix protein 2 precursor (ECM3|
            homolog) (NV domain-containing protein 1)
          Length = 3160

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = +3

Query: 111  LDQTEARIPKLNTSIRHLTGFTDRTFK------DDQSLHLDTDLNLKQTRHTPTI*WRSG 272
            L +TE  +  ++T + H++    +  K        + LH+    +L+  +H     W SG
Sbjct: 836  LRETELHVSDVDTDVTHISFTLTQAPKHGHMQISGRPLHVGGQFHLEDIKHGRISYWNSG 895

Query: 273  DES 281
            DES
Sbjct: 896  DES 898

>CRK_XENLA (P87378) SH2/SH3 adaptor crk (Adapter molecule crk) (CRK2)|
          Length = 296

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 80  NKLKQHPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQR 193
           N+   HP P  GP   PY Q     P PN  + P   R
Sbjct: 197 NQENSHPQPLGGPEPGPYAQPSVNTPLPNLQNGPIFAR 234

>IF2_CHLPN (Q9Z8M1) Translation initiation factor IF-2|
          Length = 890

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/65 (27%), Positives = 32/65 (49%)
 Frame = +3

Query: 12  KSLISRDNAQQ*TNTQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLTGFTDRTFK 191
           K + S    +  T+    +NN++   N       +++ A  PK +   ++LT F DR+ K
Sbjct: 206 KPVASDKTGKPGTSEGGEQNNREKQFN-----PANRSPASGPKRDAGKKNLTDFRDRSKK 260

Query: 192 DDQSL 206
            D+SL
Sbjct: 261 SDESL 265

>CRK_CHICK (Q04929) Proto-oncogene C-crk (P38)|
          Length = 305

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +2

Query: 80  NKLKQHPGPDSGPN*SPYTQTEHKHPSPN 166
           N+   HP P  GP   PY Q     P PN
Sbjct: 205 NQDSSHPQPLGGPEPGPYAQPSINTPLPN 233

>YSXD_BACSU (P40736) Hypothetical protein ysxD (ORFY)|
          Length = 187

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 93  CLSLFAYYYGHFVYWFIAGHYPSIL 19
           C SLF Y++   + W  + H P+ L
Sbjct: 137 CFSLFLYFFKQIMAWLESAHIPTAL 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,130,851
Number of Sequences: 219361
Number of extensions: 1123893
Number of successful extensions: 2672
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2671
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)