ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (... 525 e-146
2ref|XM_450039.1| Oryza sativa (japonica cultivar-group), mRNA 155 1e-34
3ref|XM_506632.1| PREDICTED Oryza sativa (japonica cultivar-group... 155 1e-34
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
5dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic D... 155 1e-34
6dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
7dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
8dbj|AK058316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
9dbj|AK058314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 155 1e-34
10gb|BT024028.1| Zea mays clone EL01N0420H06 mRNA sequence 153 4e-34
11gb|AY103895.1| Zea mays PCO112590 mRNA sequence 153 4e-34
12gb|BT018220.1| Zea mays clone EL01N0561C03.c mRNA sequence 145 1e-31
13gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full... 127 3e-26
14gb|BT009480.1| Triticum aestivum clone wr1.pk0038.g11:fis, full ... 125 1e-25
15gb|AF190656.1|AF190656 Nicotiana tabacum clone 1 poly(A)-binding... 94 4e-16
16gb|AF190655.1|AF190655 Nicotiana tabacum poly(A)-binding protein... 94 4e-16
17gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete s... 90 5e-15
18ref|XM_473087.1| Oryza sativa (japonica cultivar-group), predic... 88 2e-14
19gb|BT016789.1| Zea mays clone Contig622 mRNA sequence 88 2e-14
20emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4,... 88 2e-14
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
22dbj|AK105555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
23dbj|AK104208.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
24dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
25emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 88 2e-14
26ref|XM_481529.1| Oryza sativa (japonica cultivar-group), mRNA 86 9e-14
27gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome... 86 9e-14
28dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 9e-14
29dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic D... 86 9e-14
30dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic D... 86 9e-14
31dbj|AK099783.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 9e-14
32dbj|AK104792.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 9e-14
33dbj|AK098867.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 9e-14
34dbj|AK065167.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 9e-14
35dbj|AK060952.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 9e-14
36gb|AY103944.1| Zea mays PCO133356 mRNA sequence 84 3e-13
37ref|NM_119572.3| Arabidopsis thaliana PAB2 (POLY(A)-BINDING PROT... 80 5e-12
38gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete se... 80 5e-12
39gb|AY080718.1| Arabidopsis thaliana putative poly(A)-binding pro... 80 5e-12
40emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, ... 80 5e-12
41emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, B... 80 5e-12
42dbj|AK222061.1| Arabidopsis thaliana mRNA for poly(A)-binding pr... 80 5e-12
43emb|BX828392.1|CNS0A2YR Arabidopsis thaliana Full-length cDNA Co... 80 5e-12
44emb|BX827355.1|CNS0A2W2 Arabidopsis thaliana Full-length cDNA Co... 80 5e-12
45gb|BT002354.1| Arabidopsis thaliana clone C104970 putative polya... 80 5e-12
46gb|L19418.1|ATHPAB2A Arabidopsis thaliana poly(A)-binding protei... 80 5e-12
47gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete s... 70 5e-09
48gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete se... 70 5e-09
49gb|AF003126.1|AF003126 Mesembryanthemum crystallinum poly(A)-bin... 66 8e-08
50gb|AF190657.1|AF190657 Nicotiana tabacum clone 7 poly(A)-binding... 64 3e-07
51gb|AY389552.1| Hyacinthus orientalis poly(A)-binding protein (PA... 62 1e-06
52ref|XM_364660.1| Magnaporthe grisea 70-15 hypothetical protein (... 54 3e-04
53ref|NM_127899.2| Arabidopsis thaliana PAB4; RNA binding / transl... 52 0.001
54gb|AY079389.1| Arabidopsis thaliana putative poly(A) binding pro... 52 0.001
55gb|AY050859.1| Arabidopsis thaliana putative poly(A) binding pro... 52 0.001
56gb|AF360217.1| Arabidopsis thaliana putative poly(A) binding pro... 52 0.001
57gb|AC002391.3| Arabidopsis thaliana chromosome 2 clone T20D16 ma... 52 0.001
58dbj|AK221946.1| Arabidopsis thaliana mRNA for putative poly(A) b... 52 0.001
59emb|BX821408.1|CNS0A7X8 Arabidopsis thaliana Full-length cDNA Co... 52 0.001
60gb|AF240679.1|AF240679 Cucumis sativus poly(A)-binding protein m... 50 0.005
61ref|XM_816516.1| Trypanosoma cruzi strain CL Brener poly(A)-bind... 48 0.019
62gb|U11272.1|TCU11272 Trypanosoma cruzi clone 22 poly(A) binding ... 48 0.019
63gb|U06070.1|TCU06070 Trypanosoma cruzi Tulahuen poly(A) binding ... 48 0.019
64gb|AF044733.1|AF044733 Trypanosoma cruzi clone B1k poly(A)-bindi... 48 0.019
65gb|AF044732.1|AF044732 Trypanosoma cruzi clone A6a poly(A)-bindi... 48 0.019
66ref|XM_516680.1| PREDICTED: Pan troglodytes similar to DNA polym... 44 0.29
67ref|NM_199420.2| Homo sapiens polymerase (DNA directed), theta (... 44 0.29
68ref|XM_656512.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.29
69gb|AY338826.2| Homo sapiens DNA polymerase theta (POLQ) mRNA, co... 44 0.29
70emb|CR936627.1| Homo sapiens mRNA; cDNA DKFZp781A0112 (from clon... 44 0.29
71gb|AC079841.10| Homo sapiens 3 BAC RP11-10G15 (Roswell Park Canc... 44 0.29
72gb|BC034254.1| Homo sapiens, clone IMAGE:3866451, mRNA 44 0.29
73gb|AY030359.1| Anemia phyllitidis polyadenylated mRNA-binding pr... 44 0.29
74gb|AY032677.1| Homo sapiens DNA polymerase theta (POLQ) mRNA, co... 44 0.29
75gb|AF052573.1|AF052573 Homo sapiens DNA polymerase theta (POLQ) ... 44 0.29
76dbj|AB209867.1| Homo sapiens mRNA for DNA polymerase theta varia... 44 0.29
77gb|U70731.1|ENU70731 Emericella nidulans putative poly(A)-bindin... 44 0.29
78gb|AY596505.1| Helicosporidium sp. ex Simulium jonesii polyadeny... 42 1.2
79ref|XM_745074.1| Aspergillus fumigatus Af293 polyadenylate-bindi... 42 1.2
80emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chr... 42 1.2
81dbj|AK017924.1| Mus musculus adult male thymus cDNA, RIKEN full-... 42 1.2
82dbj|AK110296.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
83gb|AC154684.2| Mus musculus BAC clone RP23-143E1 from 12, comple... 42 1.2
84gb|AC152185.1| Medicago truncatula chromosome 2 BAC clone mth2-9... 40 4.6
85gb|AY730339.1| Solanum tuberosum strain P6/210 clone BAC BA76o11... 40 4.6
86gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 4.6
87gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 4.6
88gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete... 40 4.6
89gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome 40 4.6
90ref|XM_658356.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 4.6
91gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESR... 40 4.6
92gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complet... 40 4.6
93gb|CP000001.1| Bacillus cereus E33L, complete genome 40 4.6
94emb|AL805915.9| Human DNA sequence from clone RP11-118H17 on chr... 40 4.6
95emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chro... 40 4.6
96emb|AL589741.11| Human DNA sequence from clone RP11-372M18 on ch... 40 4.6
97emb|AL158835.11| Human DNA sequence from clone RP11-383C5 on chr... 40 4.6
98emb|BX897699.1| Bartonella henselae strain Houston-1, complete g... 40 4.6
99gb|AC121312.7| Mus musculus chromosome 3, clone RP24-343J5, comp... 40 4.6
100gb|AC106724.3| Homo sapiens 3 BAC RP11-270G15 (Roswell Park Canc... 40 4.6
101gb|AC007250.2| Homo sapiens BAC clone RP11-334G22 from 2, comple... 40 4.6
102dbj|AK108908.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
103gb|AE016879.1| Bacillus anthracis str. Ames, complete genome 40 4.6
104gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complet... 40 4.6
105gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 4.6 
>gb|U81318.1|TAU81318 Triticum aestivum poly(A)-binding protein (wheatpab) mRNA, complete
            cds
          Length = 2237

 Score =  525 bits (265), Expect = e-146
 Identities = 328/347 (94%), Gaps = 4/347 (1%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaccaatccatgcaaataaaataagccaatccatgggaagcctaaaagactagttcaact 60
            ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 2166 aaccaatccatgcaaataaaata-gccaatccatgggaagcctaaaagactaattcaact 2108

                                                                        
Query: 61   actggcaaaagctaagtctcaaataa---accaagtcattttcagtctaaataagtttga 117
            |  ||||||||||||||||| |||||   |||||||||||||||||||| ||||||||||
Sbjct: 2107 aacggcaaaagctaagtctccaataataaaccaagtcattttcagtctagataagtttga 2048

                                                                        
Query: 118  tatggtgcaaaaattgtcgctgtttagctcaggaagagatgaggccgtcattcaacgaaa 177
            |||||||||||||||||||| ||  |||| |||||||||||||||||||||||| ||| |
Sbjct: 2047 tatggtgcaaaaattgtcgccgtagagcttaggaagagatgaggccgtcattcagcgaga 1988

                                                                        
Query: 178  gcgaagccagctgctgctcgggggactggttggtgtgctgctgagcgctgcggagaacct 237
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1987 gcgaagccagctgctgctcaggggactggttggtgtgctgctgagcgctgcggagaacct 1928

                                                                        
Query: 238  ccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagcacct 297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1927 ccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagcacct 1868

                                                           
Query: 298  cggtctggtccatctccagaagcatgccagtaaccttggcagcctgg 344
            | |||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 1867 cagtctggtccatctccagaagcatgccggtcaccttggcagcctgg 1821
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>ref|XM_450039.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2314

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 234  acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
            ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 2025 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1966

                                                              
Query: 294  acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
            ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1965 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 1916
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>ref|XM_506632.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.15 mRNA
          Length = 2410

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 234  acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
            ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 2032 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1973

                                                              
Query: 294  acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
            ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1972 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 1923
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                           
Query: 234     acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
               ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 1160054 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1160113

                                                                 
Query: 294     acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
               ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1160114 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 1160163
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>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1310_F05
          Length = 107916

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Plus

                                                                         
Query: 234   acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
             ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 48648 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 48707

                                                               
Query: 294   acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
             ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 48708 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 48757
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>dbj|AK101706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033060I24, full
            insert sequence
          Length = 2410

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 234  acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
            ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 2032 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1973

                                                              
Query: 294  acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
            ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1972 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 1923
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>dbj|AK067816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F07, full
            insert sequence
          Length = 2314

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 234  acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
            ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 2025 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1966

                                                              
Query: 294  acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
            ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1965 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 1916
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>dbj|AK058316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A07, full
            insert sequence
          Length = 1482

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                        
Query: 234  acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
            ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 1104 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 1045

                                                              
Query: 294  acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
            ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1044 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 995
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>dbj|AK058314.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A04, full
           insert sequence
          Length = 1208

 Score =  155 bits (78), Expect = 1e-34
 Identities = 102/110 (92%)
 Strand = Plus / Minus

                                                                       
Query: 234 acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
           ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||| |||
Sbjct: 914 acctccatggcttcagcaaccttggccttgagagcctctggagactcgagcaggtgcagc 855

                                                             
Query: 294 acctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
           ||||| ||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 854 acctcagtctggtccatctccagcagcatgccagtcaccttcgcagcctg 805
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>gb|BT024028.1| Zea mays clone EL01N0420H06 mRNA sequence
          Length = 1123

 Score =  153 bits (77), Expect = 4e-34
 Identities = 107/117 (91%)
 Strand = Plus / Minus

                                                                       
Query: 227 gcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcag 286
           |||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||||
Sbjct: 782 gcggaggacctccatggcttcagcaaccttggctttcagagcatctggcgactccagcag 723

                                                                    
Query: 287 gtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
           |||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 722 gtgaagaacctccgtctgatccatctccaaaagcatgccagtgaccttggcagcctg 666
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>gb|AY103895.1| Zea mays PCO112590 mRNA sequence
          Length = 1997

 Score =  153 bits (77), Expect = 4e-34
 Identities = 107/117 (91%)
 Strand = Plus / Minus

                                                                        
Query: 227  gcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcag 286
            |||||| |||||||||||||||||||||||||| || ||||| ||||||||||| |||||
Sbjct: 1591 gcggaggacctccatggcttcagcaaccttggctttcagagcatctggcgactccagcag 1532

                                                                     
Query: 287  gtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
            |||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||||||
Sbjct: 1531 gtgaagaacctccgtctgatccatctccaaaagcatgccagtgaccttggcagcctg 1475
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>gb|BT018220.1| Zea mays clone EL01N0561C03.c mRNA sequence
          Length = 790

 Score =  145 bits (73), Expect = 1e-31
 Identities = 106/117 (90%)
 Strand = Plus / Minus

                                                                       
Query: 227 gcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcag 286
           |||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct: 497 gcggagaacctccatggcttcagcaaccttagccttgagagcatctggcgactccagcag 438

                                                                    
Query: 287 gtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggcagcctg 343
           |||||| ||||| |||||||||||||    |||||||||||  ||||||||||||||
Sbjct: 437 gtgaagaacctccgtctggtccatcttttaaagcatgccagagaccttggcagcctg 381



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 182 agccagctgctgctcggggga 202
           |||||||||||||||||||||
Sbjct: 548 agccagctgctgctcggggga 528
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>gb|BT009274.1| Triticum aestivum clone wlk8.pk0015.b12:fis, full insert mRNA
            sequence
          Length = 2056

 Score =  127 bits (64), Expect = 3e-26
 Identities = 115/132 (87%)
 Strand = Plus / Minus

                                                                        
Query: 213  tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
            ||||||||||| ||||||||||||||||| |||||||| ||||| | ||| ||||| || 
Sbjct: 1827 tgctgctgagcactgcggagaacctccatagcttcagcgaccttagacttcagagcatca 1768

                                                                        
Query: 273  ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
            || ||||| |  || |||||  |||| ||||||||||||||||||||||| |||||||||
Sbjct: 1767 ggtgactcgattagatgaagggcctcagtctggtccatctccagaagcataccagtaacc 1708

                        
Query: 333  ttggcagcctgg 344
            ||||||||||||
Sbjct: 1707 ttggcagcctgg 1696
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>gb|BT009480.1| Triticum aestivum clone wr1.pk0038.g11:fis, full insert mRNA
           sequence
          Length = 844

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Plus

                                                                       
Query: 226 tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
           |||||||||| ||||| || || |||||||||| ||||||||| ||||| ||||| ||||
Sbjct: 308 tgcggagaacatccatcgcctcggcaaccttggacttgagagcctctggagactcgagca 367

                                                                  
Query: 286 ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggcagc 340
           | || |||||||| |||||||||||||||||||||||||| || |||||||||||
Sbjct: 368 gatgcagcacctccgtctggtccatctccagaagcatgccggtcaccttggcagc 422
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>gb|AF190656.1|AF190656 Nicotiana tabacum clone 1 poly(A)-binding protein (PABP1) mRNA,
           partial cds
          Length = 1231

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                       
Query: 231 agaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtga 290
           ||||||||||| || || ||||||||||| || || || || ||||||||||||| ||| 
Sbjct: 913 agaacctccatagcctctgcaaccttggctttcagggcttcaggcgactcaagcaagtgc 854

                                                              
Query: 291 agcacctcggtctggtccatctccagaagcatgccagtaaccttggcagcc 341
           |  ||||| ||||||||||||||||  ||||||||||| ||||||||||||
Sbjct: 853 aatacctcagtctggtccatctccaagagcatgccagtcaccttggcagcc 803
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>gb|AF190655.1|AF190655 Nicotiana tabacum poly(A)-binding protein (PABP) mRNA, complete cds
          Length = 2364

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 95/111 (85%)
 Strand = Plus / Minus

                                                                        
Query: 231  agaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtga 290
            ||||||||||| || || ||||||||||| || || || || ||||||||||||| ||| 
Sbjct: 2008 agaacctccatagcctctgcaaccttggctttcagggcttcaggcgactcaagcaagtgc 1949

                                                               
Query: 291  agcacctcggtctggtccatctccagaagcatgccagtaaccttggcagcc 341
            |  ||||| ||||||||||||||||  ||||||||||| ||||||||||||
Sbjct: 1948 aatacctcagtctggtccatctccaagagcatgccagtcaccttggcagcc 1898
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>gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete sequence
          Length = 121459

 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 87/101 (86%)
 Strand = Plus / Plus

                                                                         
Query: 234   acctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagc 293
             |||||||||||||||||||| || ||||||||||| ||||| ||||| | ||  || |  
Sbjct: 82896 acctccatggcttcagcaactttagccttgagagcatctggtgactcgatcaaatgcaat 82955

                                                      
Query: 294   acctcggtctggtccatctccagaagcatgccagtaacctt 334
             || || | |||||||||||||||||||||||||||||||||
Sbjct: 82956 acttcaggctggtccatctccagaagcatgccagtaacctt 82996
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>ref|XM_473087.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1980

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                        
Query: 226  tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
            ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||||| ||||
Sbjct: 1900 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 1841

                                                                
Query: 286  ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
            | || || ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 1840 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggc 1789
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>gb|BT016789.1| Zea mays clone Contig622 mRNA sequence
          Length = 1208

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 99/116 (85%), Gaps = 1/116 (0%)
 Strand = Plus / Minus

                                                                       
Query: 226 tgcggagaacctccatggcttcagcaa-ccttggccttgagagcgtctggcgactcaagc 284
           |||||||||| ||||| || ||||||  |||||| ||||||||| || || ||||| |||
Sbjct: 820 tgcggagaacatccattgcctcagcattccttggacttgagagcatcaggggactcgagc 761

                                                                   
Query: 285 aggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggcagc 340
           ||||| || ||||||||||| |||||||||| |||||| ||||| ||||| |||||
Sbjct: 760 aggtggaggacctcggtctgatccatctccaaaagcattccagtgacctttgcagc 705
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>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07,
             complete sequence
          Length = 130779

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 226   tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
             ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||||| ||||
Sbjct: 52095 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 52154

                                                                 
Query: 286   ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
             | || || ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 52155 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggc 52206
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                            
Query: 226      tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
                ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||||| ||||
Sbjct: 25170428 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 25170487

                                                                    
Query: 286      ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
                | || || ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 25170488 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggc 25170539
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>dbj|AK105555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-B03, full
           insert sequence
          Length = 1647

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
           ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||||| ||||
Sbjct: 744 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 685

                                                               
Query: 286 ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
           | || || ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 684 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggc 633
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>dbj|AK104208.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B11, full
           insert sequence
          Length = 1050

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                       
Query: 226 tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
           ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||||| ||||
Sbjct: 694 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 635

                                                               
Query: 286 ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
           | || || ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 634 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggc 583
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>dbj|AK067210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096J03, full
            insert sequence
          Length = 2549

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Minus

                                                                        
Query: 226  tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
            ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||||| ||||
Sbjct: 2180 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 2121

                                                                
Query: 286  ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
            | || || ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 2120 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggc 2069
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>emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0014K14,
              complete sequence
          Length = 150187

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                          
Query: 226    tgcggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagca 285
              ||||||| || ||||| || ||||||||||||| ||| ||||| ||||| ||||| ||||
Sbjct: 117855 tgcggaggacatccatcgcctcagcaaccttggacttcagagcctctggagactcgagca 117914

                                                                  
Query: 286    ggtgaagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
              | || || ||||| ||||| ||||||||||||||||| || || ||||||||
Sbjct: 117915 gatgcaggacctccgtctgatccatctccagaagcattccggtgaccttggc 117966
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>ref|XM_481529.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1983

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
            |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 1919 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 1860

                                                                        
Query: 273  ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
            || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 1859 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 1800

                       
Query: 333  ttggcagcctg 343
            || || |||||
Sbjct: 1799 ttcgctgcctg 1789
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>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12,
             complete sequence
          Length = 146632

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                         
Query: 213   tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
             |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 59263 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 59204

                                                                         
Query: 273   ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
             || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 59203 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 59144

                        
Query: 333   ttggcagcctg 343
             || || |||||
Sbjct: 59143 ttcgctgcctg 59133
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                            
Query: 213      tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
                |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 13471636 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 13471577

                                                                            
Query: 273      ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
                || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 13471576 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 13471517

                           
Query: 333      ttggcagcctg 343
                || || |||||
Sbjct: 13471516 ttcgctgcctg 13471506
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>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0451H06
          Length = 136473

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
            |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 9950 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 9891

                                                                        
Query: 273  ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
            || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 9890 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 9831

                       
Query: 333  ttggcagcctg 343
            || || |||||
Sbjct: 9830 ttcgctgcctg 9820
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>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1120_B07
          Length = 118763

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                          
Query: 213    tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
              |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 108363 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 108304

                                                                          
Query: 273    ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
              || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 108303 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 108244

                         
Query: 333    ttggcagcctg 343
              || || |||||
Sbjct: 108243 ttcgctgcctg 108233
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>dbj|AK099783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096A14, full
            insert sequence
          Length = 1416

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
            |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 1144 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 1085

                                                                        
Query: 273  ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
            || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 1084 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 1025

                       
Query: 333  ttggcagcctg 343
            || || |||||
Sbjct: 1024 ttcgctgcctg 1014
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>dbj|AK104792.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-F09, full
           insert sequence
          Length = 1180

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                       
Query: 213 tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
           |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 933 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 874

                                                                       
Query: 273 ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
           || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 873 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 814

                      
Query: 333 ttggcagcctg 343
           || || |||||
Sbjct: 813 ttcgctgcctg 803
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>dbj|AK098867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A12, full
            insert sequence
          Length = 2412

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
            |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 2086 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 2027

                                                                        
Query: 273  ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
            || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 2026 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 1967

                       
Query: 333  ttggcagcctg 343
            || || |||||
Sbjct: 1966 ttcgctgcctg 1956
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>dbj|AK065167.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C13, full
            insert sequence
          Length = 2387

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 213  tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
            |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 2116 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 2057

                                                                        
Query: 273  ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
            || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 2056 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 1997

                       
Query: 333  ttggcagcctg 343
            || || |||||
Sbjct: 1996 ttcgctgcctg 1986
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>dbj|AK060952.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-G03, full
           insert sequence
          Length = 1208

 Score = 85.7 bits (43), Expect = 9e-14
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                       
Query: 213 tgctgctgagcgctgcggagaacctccatggcttcagcaaccttggccttgagagcgtct 272
           |||||||||||  | |||||||| ||||| || ||||| ||||||||||| ||||| || 
Sbjct: 937 tgctgctgagcattacggagaacttccatagcctcagcgaccttggccttaagagcatca 878

                                                                       
Query: 273 ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagtaacc 332
           || |||||||  || || || || || |||||||||||||||| |||||||||||| |||
Sbjct: 877 ggtgactcaatgagatggagaacttcagtctggtccatctccaaaagcatgccagtgacc 818

                      
Query: 333 ttggcagcctg 343
           || || |||||
Sbjct: 817 ttcgctgcctg 807
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>gb|AY103944.1| Zea mays PCO133356 mRNA sequence
          Length = 2499

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                        
Query: 229  ggagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggt 288
            ||||||| ||||| || ||||||||||| | |||||| || || || |||||||||||||
Sbjct: 2099 ggagaacatccatcgcctcagcaacctttgacttgagggcatcaggggactcaagcaggt 2040

                                                          
Query: 289  gaagcacctcggtctggtccatctccagaagcatgccagtaacctt 334
            | || ||||| ||||| |||||||||| |||||| ||||| |||||
Sbjct: 2039 ggaggacctcagtctgatccatctccaaaagcattccagtgacctt 1994
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>ref|NM_119572.3| Arabidopsis thaliana PAB2 (POLY(A)-BINDING PROTEIN 2); RNA binding
            AT4G34110 (PAB2) mRNA, complete cds
          Length = 2440

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                        
Query: 230  gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
            |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 2177 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 2118

                                                            
Query: 290  aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
             ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 2117 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 2070
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>gb|AC122728.32| Medicago truncatula clone mth2-22l4, complete sequence
          Length = 102937

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 88/104 (84%)
 Strand = Plus / Plus

                                                                         
Query: 237   tccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagcacc 296
             |||| ||| |||||||| || | ||||||||| ||||| ||||||| ||| || | ||||
Sbjct: 23422 tccacggcctcagcaactttagtcttgagagcctctggtgactcaatcagatgtaacacc 23481

                                                         
Query: 297   tcggtctggtccatctccagaagcatgccagtaaccttggcagc 340
             || | |||||||||||||| |||||| ||||||||||| |||||
Sbjct: 23482 tcaggctggtccatctccaaaagcataccagtaacctttgcagc 23525
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>gb|AY080718.1| Arabidopsis thaliana putative poly(A)-binding protein (At4g34110)
            mRNA, partial cds
          Length = 2033

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                        
Query: 230  gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
            |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 1785 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 1726

                                                            
Query: 290  aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
             ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 1725 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 1678
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>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80
          Length = 192861

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                          
Query: 230    gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
              |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 173392 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 173333

                                                              
Query: 290    aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
               ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 173332 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 173285
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>emb|AL021961.2|ATF28A23 Arabidopsis thaliana DNA chromosome 4, BAC clone F28A23 (ESSA project)
          Length = 94091

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                         
Query: 230   gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
             |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 43343 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 43284

                                                             
Query: 290   aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
              ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 43283 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 43236
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>dbj|AK222061.1| Arabidopsis thaliana mRNA for poly(A)-binding protein, complete
           cds, clone: RAFL22-79-P19
          Length = 624

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                       
Query: 230 gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
           |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 389 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 330

                                                           
Query: 290 aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
            ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 329 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 282
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>emb|BX828392.1|CNS0A2YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH83ZH02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 723

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                       
Query: 230 gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
           |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 513 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 454

                                                           
Query: 290 aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
            ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 453 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 406
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>emb|BX827355.1|CNS0A2W2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS43ZH05 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1567

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                        
Query: 230  gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
            |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 1354 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 1295

                                                            
Query: 290  aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
             ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 1294 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 1247
to top
>gb|BT002354.1| Arabidopsis thaliana clone C104970 putative polyadenylate-binding
            protein 2 (PABP2) (At4g34110) mRNA, complete cds
          Length = 1921

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                        
Query: 230  gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
            |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 1833 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 1774

                                                            
Query: 290  aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
             ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 1773 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 1726
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>gb|L19418.1|ATHPAB2A Arabidopsis thaliana poly(A)-binding protein mRNA, complete cds
          Length = 2427

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 91/108 (84%)
 Strand = Plus / Minus

                                                                        
Query: 230  gagaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtg 289
            |||||| ||||| || || ||||| |||||||||||||| ||||| ||||| | ||| ||
Sbjct: 2164 gagaacatccatagcctctgcaactttggccttgagagcttctggtgactccaacagatg 2105

                                                            
Query: 290  aagcacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
             ||||| || |||||||||||||||| |||||| ||||| || |||||
Sbjct: 2104 gagcacttcagtctggtccatctccaaaagcatcccagtcactttggc 2057
to top
>gb|AC136449.21| Medicago truncatula clone mth2-11k13, complete sequence
          Length = 112369

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                         
Query: 270   tctggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagta 329
             ||||| ||||| |||| ||| || || || ||||||||||||||||||||||| ||||||
Sbjct: 59809 tctggtgactcgagcaagtgcagaacttcagtctggtccatctccagaagcataccagta 59750

                        
Query: 330   accttggcagc 340
             || ||||||||
Sbjct: 59749 actttggcagc 59739
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>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence
          Length = 141776

 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 270  tctggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcatgccagta 329
            ||||| ||||| |||| ||| || || || ||||||||||||||||||||||| ||||||
Sbjct: 2837 tctggtgactcgagcaagtgcagaacttcagtctggtccatctccagaagcataccagta 2778

                       
Query: 330  accttggcagc 340
            || ||||||||
Sbjct: 2777 actttggcagc 2767
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>gb|AF003126.1|AF003126 Mesembryanthemum crystallinum poly(A)-binding protein mRNA, partial
           cds
          Length = 754

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                       
Query: 237 tccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaagcacc 296
           ||||| || ||||||||||||| |||||| || ||||| ||||| |||| ||| ||||||
Sbjct: 428 tccattgcctcagcaaccttggacttgagcgcttctggagactcgagcaagtgcagcacc 369

                            
Query: 297 tcggtctggtccatctc 313
           || ||||| ||||||||
Sbjct: 368 tcagtctgatccatctc 352
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>gb|AF190657.1|AF190657 Nicotiana tabacum clone 7 poly(A)-binding protein (PABP) mRNA,
            partial cds
          Length = 1651

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  agaacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtga 290
            ||||| ||||| || |||||||| || ||||| ||||| ||||| || |||||||| || 
Sbjct: 1364 agaacttccatagcctcagcaactttagccttcagagcctctggtgattcaagcagatgc 1305

                                                        
Query: 291  agcacctcggtctggtccatctccagaagcatgccagtaacctt 334
            |  ||||| ||||| ||||| || ||||||||||| ||||||||
Sbjct: 1304 aaaacctcagtctgatccatttcaagaagcatgcctgtaacctt 1261
to top
>gb|AY389552.1| Hyacinthus orientalis poly(A)-binding protein (PABP) mRNA, partial
           cds
          Length = 660

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 294 acctcggtctggtccatctccagaagcatgccagtaaccttggcagc 340
           ||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 237 acctcggtctggtccatctccagaagcatccccgtcactttggcagc 191
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>ref|XM_364660.1| Magnaporthe grisea 70-15 hypothetical protein (MG09505.4) partial
            mRNA
          Length = 2289

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 305  gtccatctccagaagcatgccagtaaccttg 335
            |||||||||||||||||||||||||| ||||
Sbjct: 2133 gtccatctccagaagcatgccagtaatcttg 2103
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>ref|NM_127899.2| Arabidopsis thaliana PAB4; RNA binding / translation initiation
            factor AT2G23350 (PAB4) mRNA, complete cds
          Length = 2371

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 255  ttggccttgagagcgtctggcgactcaagcaggtgaagcacctcggtctggtccatctcc 314
            ||||| || ||||| ||||| ||||| ||||| || |  ||||||||||| ||||| |||
Sbjct: 2021 ttggcatttagagcctctggtgactcgagcagatgcaaaacctcggtctgatccatttcc 1962

                          
Query: 315  agaagcatgccagt 328
            |||||||| |||||
Sbjct: 1961 agaagcataccagt 1948
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>gb|AY079389.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350)
            mRNA, complete cds
          Length = 2020

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 255  ttggccttgagagcgtctggcgactcaagcaggtgaagcacctcggtctggtccatctcc 314
            ||||| || ||||| ||||| ||||| ||||| || |  ||||||||||| ||||| |||
Sbjct: 1865 ttggcatttagagcctctggtgactcgagcagatgcaaaacctcggtctgatccatttcc 1806

                          
Query: 315  agaagcatgccagt 328
            |||||||| |||||
Sbjct: 1805 agaagcataccagt 1792
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>gb|AY050859.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350)
            mRNA, complete cds
          Length = 2337

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 255  ttggccttgagagcgtctggcgactcaagcaggtgaagcacctcggtctggtccatctcc 314
            ||||| || ||||| ||||| ||||| ||||| || |  ||||||||||| ||||| |||
Sbjct: 2019 ttggcatttagagcctctggtgactcgagcagatgcaaaacctcggtctgatccatttcc 1960

                          
Query: 315  agaagcatgccagt 328
            |||||||| |||||
Sbjct: 1959 agaagcataccagt 1946
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>gb|AF360217.1| Arabidopsis thaliana putative poly(A) binding protein (At2g23350)
            mRNA, complete cds
          Length = 2385

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 255  ttggccttgagagcgtctggcgactcaagcaggtgaagcacctcggtctggtccatctcc 314
            ||||| || ||||| ||||| ||||| ||||| || |  ||||||||||| ||||| |||
Sbjct: 2018 ttggcatttagagcctctggtgactcgagcagatgcaaaacctcggtctgatccatttcc 1959

                          
Query: 315  agaagcatgccagt 328
            |||||||| |||||
Sbjct: 1958 agaagcataccagt 1945
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>gb|AC002391.3| Arabidopsis thaliana chromosome 2 clone T20D16 map CIC06C07, complete
            sequence
          Length = 108881

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                        
Query: 255  ttggccttgagagcgtctggcgactcaagcaggtgaagcacctcggtctggtccatctcc 314
            ||||| || ||||| ||||| ||||| ||||| || |  ||||||||||| ||||| |||
Sbjct: 5520 ttggcatttagagcctctggtgactcgagcagatgcaaaacctcggtctgatccatttcc 5579

                          
Query: 315  agaagcatgccagt 328
            |||||||| |||||
Sbjct: 5580 agaagcataccagt 5593
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>dbj|AK221946.1| Arabidopsis thaliana mRNA for putative poly(A) binding protein,
           complete cds, clone: RAFL22-47-D09
          Length = 694

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 255 ttggccttgagagcgtctggcgactcaagcaggtgaagcacctcggtctggtccatctcc 314
           ||||| || ||||| ||||| ||||| ||||| || |  ||||||||||| ||||| |||
Sbjct: 353 ttggcatttagagcctctggtgactcgagcagatgcaaaacctcggtctgatccatttcc 294

                         
Query: 315 agaagcatgccagt 328
           |||||||| |||||
Sbjct: 293 agaagcataccagt 280
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>emb|BX821408.1|CNS0A7X8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL3ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 712

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                       
Query: 255 ttggccttgagagcgtctggcgactcaagcaggtgaagcacctcggtctggtccatctcc 314
           ||||| || ||||| ||||| ||||| ||||| || |  ||||||||||| ||||| |||
Sbjct: 408 ttggcatttagagcctctggtgactcgagcagatgcaaaacctcggtctgatccatttcc 349

                         
Query: 315 agaagcatgccagt 328
           |||||||| |||||
Sbjct: 348 agaagcataccagt 335
to top
>gb|AF240679.1|AF240679 Cucumis sativus poly(A)-binding protein mRNA, complete cds
          Length = 2603

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                        
Query: 233  aacctccatggcttcagcaaccttggccttgagagcgtctggcgactcaagcaggtgaag 292
            ||||||||| ||||| || ||||| || || ||||| || |||||||||||||  || ||
Sbjct: 2266 aacctccattgcttccgccaccttagctttcagagcttcgggcgactcaagcaaatgtag 2207

                                                         
Query: 293  cacctcggtctggtccatctccagaagcatgccagtaaccttggc 337
             ||||| || |||||||| ||||  ||||| || || ||||||||
Sbjct: 2206 aacctcagtttggtccatttccaatagcattcctgttaccttggc 2162
to top
>ref|XM_816516.1| Trypanosoma cruzi strain CL Brener poly(A)-binding protein
            (Tc00.1047053508461.140) partial mRNA
          Length = 1653

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 306  tccatctccagaagcatgccagtaaccttggcagcc 341
            |||||||||| |||||||||||| ||||| ||||||
Sbjct: 1556 tccatctccaaaagcatgccagtcacctttgcagcc 1521
to top
>gb|U11272.1|TCU11272 Trypanosoma cruzi clone 22 poly(A) binding protein mRNA, complete cds
          Length = 2103

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 306  tccatctccagaagcatgccagtaaccttggcagcc 341
            |||||||||| |||||||||||| ||||| ||||||
Sbjct: 1792 tccatctccaaaagcatgccagtcacctttgcagcc 1757
to top
>gb|U06070.1|TCU06070 Trypanosoma cruzi Tulahuen poly(A) binding protein mRNA, complete cds
          Length = 2013

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 306  tccatctccagaagcatgccagtaaccttggcagcc 341
            |||||||||| |||||||||||| ||||| ||||||
Sbjct: 1704 tccatctccaaaagcatgccagtcacctttgcagcc 1669
to top
>gb|AF044733.1|AF044733 Trypanosoma cruzi clone B1k poly(A)-binding protein (PABP) gene,
            complete cds
          Length = 4292

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 306  tccatctccagaagcatgccagtaaccttggcagcc 341
            |||||||||| |||||||||||| ||||| ||||||
Sbjct: 3916 tccatctccaaaagcatgccagtcacctttgcagcc 3881
to top
>gb|AF044732.1|AF044732 Trypanosoma cruzi clone A6a poly(A)-binding protein (PABP) gene,
            complete cds
          Length = 6055

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 306  tccatctccagaagcatgccagtaaccttggcagcc 341
            |||||||||| |||||||||||| ||||| ||||||
Sbjct: 2198 tccatctccaaaagcatgccagtcacctttgcagcc 2163
to top
>ref|XM_516680.1| PREDICTED: Pan troglodytes similar to DNA polymerase theta
            (LOC460619), mRNA
          Length = 4007

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 1475 aaataaaccaagtcattttcag 1496
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>ref|NM_199420.2| Homo sapiens polymerase (DNA directed), theta (POLQ), mRNA
          Length = 8790

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 3843 aaataaaccaagtcattttcag 3864
to top
>ref|XM_656512.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4000.2), mRNA
          Length = 2136

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 305  gtccatctccagaagcatgccagtaa 330
            |||||||||||||||||| |||||||
Sbjct: 2031 gtccatctccagaagcataccagtaa 2006
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>gb|AY338826.2| Homo sapiens DNA polymerase theta (POLQ) mRNA, complete cds
          Length = 8775

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 3867 aaataaaccaagtcattttcag 3888
to top
>emb|CR936627.1| Homo sapiens mRNA; cDNA DKFZp781A0112 (from clone DKFZp781A0112)
          Length = 10778

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 5917 aaataaaccaagtcattttcag 5938
to top
>gb|AC079841.10| Homo sapiens 3 BAC RP11-10G15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 167865

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 81     aaataaaccaagtcattttcag 102
              ||||||||||||||||||||||
Sbjct: 146915 aaataaaccaagtcattttcag 146894
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>gb|BC034254.1| Homo sapiens, clone IMAGE:3866451, mRNA
          Length = 2410

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 2234 aaataaaccaagtcattttcag 2255
to top
>gb|AY030359.1| Anemia phyllitidis polyadenylated mRNA-binding protein 2 (Pab2) mRNA,
            partial cds
          Length = 1609

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 273  ggcgactcaagcaggtgaagcacctcggtctggtccatctccagaagcat 322
            ||||||||||  ||||| || ||||| ||||||||||| || ||||||||
Sbjct: 1289 ggcgactcaatgaggtgtagaacctctgtctggtccatttctagaagcat 1240
to top
>gb|AY032677.1| Homo sapiens DNA polymerase theta (POLQ) mRNA, complete cds
          Length = 9061

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 4140 aaataaaccaagtcattttcag 4161
to top
>gb|AF052573.1|AF052573 Homo sapiens DNA polymerase theta (POLQ) mRNA, complete cds
          Length = 6588

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 1667 aaataaaccaagtcattttcag 1688
to top
>dbj|AB209867.1| Homo sapiens mRNA for DNA polymerase theta variant protein
          Length = 8507

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 81   aaataaaccaagtcattttcag 102
            ||||||||||||||||||||||
Sbjct: 3794 aaataaaccaagtcattttcag 3815
to top
>gb|U70731.1|ENU70731 Emericella nidulans putative poly(A)-binding protein (fabM) gene,
            complete cds
          Length = 3076

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 305  gtccatctccagaagcatgccagtaa 330
            |||||||||||||||||| |||||||
Sbjct: 2665 gtccatctccagaagcataccagtaa 2640
to top
>gb|AY596505.1| Helicosporidium sp. ex Simulium jonesii polyadenylate binding
           protein mRNA, partial cds
          Length = 487

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 305 gtccatctccagaagcatgcc 325
           |||||||||||||||||||||
Sbjct: 171 gtccatctccagaagcatgcc 151
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>ref|XM_745074.1| Aspergillus fumigatus Af293 polyadenylate-binding protein
            (Afu1g04190) partial mRNA
          Length = 2262

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 305  gtccatctccagaagcatgccagtaaccttggcagcc 341
            |||||||||||||||||| ||||| | |||| |||||
Sbjct: 2085 gtccatctccagaagcataccagtgatcttgccagcc 2049
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>emb|AL645950.13| Mouse DNA sequence from clone RP23-13C17 on chromosome 1 Contains the
             Eef1b2 gene for eukaryotic translation elongation factor 1
             beta 2, the Ndufs1 gene for NADH dehydrogenase
             (ubiquinone) Fe-S protein 1 (Ndufs1), the Gpr1 gene for
             G-protein coupled receptor 1, the 5' end of a novel gene,
             two novel genes and two CpG islands, complete sequence
          Length = 138564

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    aaataaaccaagtcattttca 101
             |||||||||||||||||||||
Sbjct: 52364 aaataaaccaagtcattttca 52384
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>dbj|AK017924.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5830412M15 product:unclassifiable, full
           insert sequence
          Length = 1577

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 81  aaataaaccaagtcattttca 101
           |||||||||||||||||||||
Sbjct: 626 aaataaaccaagtcattttca 646
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>dbj|AK110296.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-H06, full
            insert sequence
          Length = 3118

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 305  gtccatctccagaagcatgcc 325
            |||||||||||||||||||||
Sbjct: 2404 gtccatctccagaagcatgcc 2384
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>gb|AC154684.2| Mus musculus BAC clone RP23-143E1 from 12, complete sequence
          Length = 219213

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   gtccatctccagaagcatgcc 325
             |||||||||||||||||||||
Sbjct: 60496 gtccatctccagaagcatgcc 60516
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>gb|AC152185.1| Medicago truncatula chromosome 2 BAC clone mth2-97e5, complete sequence
          Length = 132467

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    aaataaaataagccaatcca 33
             ||||||||||||||||||||
Sbjct: 29474 aaataaaataagccaatcca 29455
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>gb|AY730339.1| Solanum tuberosum strain P6/210 clone BAC BA76o11, complete sequence
          Length = 71400

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    atgcaaataaaataagccaa 29
             ||||||||||||||||||||
Sbjct: 42605 atgcaaataaaataagccaa 42624
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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaccaatccatgcaaataaaataa 24
              ||||||||||||||| ||||||||
Sbjct: 203490 aaccaatccatgcaactaaaataa 203467
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>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 94    cattttcagtctaaataagt 113
             ||||||||||||||||||||
Sbjct: 10897 cattttcagtctaaataagt 10916
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>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaccaatccatgcaaataaaataa 24
              ||||||||||||||| ||||||||
Sbjct: 199535 aaccaatccatgcaactaaaataa 199512
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>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaccaatccatgcaaataaaataa 24
              ||||||||||||||| ||||||||
Sbjct: 199536 aaccaatccatgcaactaaaataa 199513
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>ref|XM_658356.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5844.2), mRNA
          Length = 489

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 gtccatctccagaagcatgc 324
           ||||||||||||||||||||
Sbjct: 318 gtccatctccagaagcatgc 299
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>gb|AY528719.1| Homo sapiens estrogen-related receptor gamma (ESRRG) gene, complete cds
          Length = 590284

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 73     taagtctcaaataaaccaag 92
              ||||||||||||||||||||
Sbjct: 239456 taagtctcaaataaaccaag 239475
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>gb|AC121867.2| Mus musculus BAC clone RP24-115M7 from 6, complete sequence
          Length = 165179

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 12     gcaaataaaataagccaatccatg 35
              |||||||||||||| |||||||||
Sbjct: 138436 gcaaataaaataaggcaatccatg 138459
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaccaatccatgcaaataaaataa 24
              ||||||||||||||| ||||||||
Sbjct: 200864 aaccaatccatgcaactaaaataa 200841
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>emb|AL805915.9| Human DNA sequence from clone RP11-118H17 on chromosome 10 Contains a
              novel gene, complete sequence
          Length = 103488

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    gaacctccatggcttcagcaacct 255
              |||||||||||| |||||||||||
Sbjct: 101643 gaacctccatgggttcagcaacct 101666
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>emb|AL603752.6| Human DNA sequence from clone RP11-296A1 on chromosome 1 Contains part
             of the ESRRG gene for  estrogen-related receptor gamma,
             complete sequence
          Length = 48868

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 73    taagtctcaaataaaccaag 92
             ||||||||||||||||||||
Sbjct: 33894 taagtctcaaataaaccaag 33875
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>emb|AL589741.11| Human DNA sequence from clone RP11-372M18 on chromosome 1 Contains a
              novel gene and the 5' end of a novel gene, complete
              sequence
          Length = 159331

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 140    tttagctcaggaagagatgaggccgtca 167
              ||||||||||||||| ||||||| ||||
Sbjct: 128584 tttagctcaggaagacatgaggcagtca 128557
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>emb|AL158835.11| Human DNA sequence from clone RP11-383C5 on chromosome 10 Contains
           a aldolase A, fructose-bisphosphate pseudogene 2, four
           novel genes, the gene for erythroid
           differentiation-related factor 1 (EDRF1), the 3' end of
           the MMP21 gene for matrix metalloproteinase 21 and one
           CpG island, complete sequence
          Length = 174530

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 232 gaacctccatggcttcagcaacct 255
           |||||||||||| |||||||||||
Sbjct: 155 gaacctccatgggttcagcaacct 178
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>emb|BX897699.1| Bartonella henselae strain Houston-1, complete genome
          Length = 1931047

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    taagtttgatatggtgcaaaaatt 132
              ||||||| ||||||||||||||||
Sbjct: 702169 taagttttatatggtgcaaaaatt 702192
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>gb|AC121312.7| Mus musculus chromosome 3, clone RP24-343J5, complete sequence
          Length = 165914

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 79     tcaaataaaccaagtcattt 98
              ||||||||||||||||||||
Sbjct: 118203 tcaaataaaccaagtcattt 118222
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>gb|AC106724.3| Homo sapiens 3 BAC RP11-270G15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162831

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aatccatgcaaataaaataa 24
             ||||||||||||||||||||
Sbjct: 40540 aatccatgcaaataaaataa 40521
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>gb|AC007250.2| Homo sapiens BAC clone RP11-334G22 from 2, complete sequence
          Length = 180557

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 60    tactggcaaaagctaagtct 79
             ||||||||||||||||||||
Sbjct: 41055 tactggcaaaagctaagtct 41036
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>dbj|AK108908.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-G05, full
           insert sequence
          Length = 925

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 306 tccatctccagaagcatgcc 325
           ||||||||||||||||||||
Sbjct: 502 tccatctccagaagcatgcc 483
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>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      aaccaatccatgcaaataaaataa 24
              ||||||||||||||| ||||||||
Sbjct: 199535 aaccaatccatgcaactaaaataa 199512
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>gb|AC135018.3| Mus musculus BAC clone RP23-124G8 from 6, complete sequence
          Length = 192911

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    gcaaataaaataagccaatccatg 35
             |||||||||||||| |||||||||
Sbjct: 72876 gcaaataaaataaggcaatccatg 72853
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cattttcagtctaaataagt 113
             ||||||||||||||||||||
Sbjct: 35805 cattttcagtctaaataagt 35786


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,783,247
Number of Sequences: 3902068
Number of extensions: 3783247
Number of successful extensions: 62697
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62383
Number of HSP's gapped (non-prelim): 311
length of query: 344
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 322
effective length of database: 17,147,199,772
effective search space: 5521398326584
effective search space used: 5521398326584
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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