>SYV_ZYMMO (Q5NLA8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 884

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
 Frame = -1

Query: 167 WRSGAWIATAERLASSSM---RTDVV*TWTSAMHATSYRWLENSGPVIISK--WCGY 12
           W +  W   AE+LA  ++   R+  +     +   T Y WLEN  P  IS+  W G+
Sbjct: 361 WLTDQWYVDAEKLAQPALEAVRSGKIKIIPESWTKTYYNWLENIQPWCISRQLWWGH 417

>CDC68_KLULA (Q00976) Cell division control protein 68|
          Length = 1033

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = -3

Query: 123 FFDEDGCCVDLDECDACHILPMVRKFRPRNYKQMVW 16
           FF + G  +      A H+LP V KF   +YK  +W
Sbjct: 69  FFKDKGVIIT-SSAKAKHLLPAVTKFEGSDYKLEIW 103

>GADW_SHIFL (P63203) HTH-type transcriptional regulator gadW|
          Length = 242

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 192 QPTLLMHGMAIGSLDSDGREASKFFDEDGCCVDLDECDACHILPMVRKFRPRN 34
           Q  + +H  +I  L+ +  +   F   D   +D+DE   CH L  +R+  PRN
Sbjct: 20  QQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQL-PRN 71

>GADW_ECOLI (P63201) HTH-type transcriptional regulator gadW|
          Length = 242

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 192 QPTLLMHGMAIGSLDSDGREASKFFDEDGCCVDLDECDACHILPMVRKFRPRN 34
           Q  + +H  +I  L+ +  +   F   D   +D+DE   CH L  +R+  PRN
Sbjct: 20  QQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQL-PRN 71

>GADW_ECO57 (P63202) HTH-type transcriptional regulator gadW|
          Length = 242

 Score = 27.7 bits (60), Expect = 8.6
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 192 QPTLLMHGMAIGSLDSDGREASKFFDEDGCCVDLDECDACHILPMVRKFRPRN 34
           Q  + +H  +I  L+ +  +   F   D   +D+DE   CH L  +R+  PRN
Sbjct: 20  QQKISLHNESILLLEKNLADDFAFCSPDTRRLDIDELTVCHYLQNIRQL-PRN 71


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,417,600
Number of Sequences: 219361
Number of extensions: 403771
Number of successful extensions: 1393
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1261
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)