Clone Name | rbart60c11 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosom... | 42 | 0.66 | 2 | gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, comple... | 42 | 0.66 | 3 | gb|AC073608.19| Homo sapiens 12 BAC RP11-36P3 (Roswell Park Canc... | 42 | 0.66 |
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>gb|AC164701.4| Mus musculus BAC clone RP24-108J12 from chromosome 17, complete sequence Length = 184296 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 aagaacttgctagcctctctg 139 ||||||||||||||||||||| Sbjct: 111832 aagaacttgctagcctctctg 111852
>gb|AC121945.2| Mus musculus BAC clone RP24-211I4 from 17, complete sequence Length = 157262 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 119 aagaacttgctagcctctctg 139 ||||||||||||||||||||| Sbjct: 43024 aagaacttgctagcctctctg 43044
>gb|AC073608.19| Homo sapiens 12 BAC RP11-36P3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111182 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 ggggcctgaattttctaacca 59 ||||||||||||||||||||| Sbjct: 9915 ggggcctgaattttctaacca 9935 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,182,625 Number of Sequences: 3902068 Number of extensions: 1182625 Number of successful extensions: 75107 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75100 Number of HSP's gapped (non-prelim): 7 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)