>gb|AY604705.1| Spirhapalum polesianum 28S ribosomal RNA gene, partial sequence
          Length = 1266

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 132 atcacacacgccaccacccaat 153
           ||||||||||||||||||||||
Sbjct: 862 atcacacacgccaccacccaat 841

>gb|AY604704.1| Spirorchis artericola 28S ribosomal RNA gene, partial sequence
          Length = 1265

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 132 atcacacacgccaccacccaat 153
           ||||||||||||||||||||||
Sbjct: 861 atcacacacgccaccacccaat 840

>gb|AY858882.1| Spirorchis scripta voucher W118 28S ribosomal RNA gene, partial
           sequence
          Length = 3686

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 132 atcacacacgccaccacccaat 153
           ||||||||||||||||||||||
Sbjct: 808 atcacacacgccaccacccaat 787

>gb|AY222174.1| Spirorchis scripta 28S ribosomal RNA gene, partial sequence
          Length = 1278

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 132 atcacacacgccaccacccaat 153
           ||||||||||||||||||||||
Sbjct: 870 atcacacacgccaccacccaat 849

>gb|AF167093.1|AF167093 Spirorchis sp. 28S ribosomal RNA gene, partial sequence
          Length = 1104

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 132 atcacacacgccaccacccaat 153
           ||||||||||||||||||||||
Sbjct: 893 atcacacacgccaccacccaat 872

>gb|AC027489.8| Homo sapiens chromosome , clone RP11-453M23, complete sequence
          Length = 189706

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    taagattccatccatcacctg 59
             |||||||||||||||||||||
Sbjct: 97102 taagattccatccatcacctg 97082

>gb|AC091108.5| Homo sapiens chromosome 18, clone RP11-765H19, complete sequence
          Length = 164790

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 39     taagattccatccatcacctg 59
              |||||||||||||||||||||
Sbjct: 154692 taagattccatccatcacctg 154712

>gb|AC146296.3| Mus musculus BAC clone RP23-277D1 from chromosome 9, complete sequence
          Length = 177641

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   ttcttttctaggacatgaaa 357
             ||||||||||||||||||||
Sbjct: 47418 ttcttttctaggacatgaaa 47437

>emb|Z14092.1|CER107 Caenorhabditis elegans Cosmid R107, complete sequence
          Length = 40970

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    tgttttcagtcagtattcac 77
             ||||||||||||||||||||
Sbjct: 27537 tgttttcagtcagtattcac 27556

>gb|AC122928.4| Mus musculus BAC clone RP23-10G8 from 9, complete sequence
          Length = 205725

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   ttcttttctaggacatgaaa 357
             ||||||||||||||||||||
Sbjct: 76942 ttcttttctaggacatgaaa 76923

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 207     gcatcaatcagaccctgtcg 226
               ||||||||||||||||||||
Sbjct: 3633412 gcatcaatcagaccctgtcg 3633431

>gb|AC036176.8| Homo sapiens chromosome 18, clone RP11-635N19, complete sequence
          Length = 173252

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    tacaaggggctttttcacctctta 110
             |||||||||||||||| |||||||
Sbjct: 69317 tacaaggggctttttcccctctta 69340

>gb|U40801.1| Caenorhabditis elegans cosmid F28E10, complete sequence
          Length = 38614

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    ggtttgtgttgcaaattttg 38
             ||||||||||||||||||||
Sbjct: 32689 ggtttgtgttgcaaattttg 32708

>gb|AC009267.15|AC009267 Homo sapiens chromosome 18, clone RP11-495C15, complete sequence
          Length = 188923

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 87     tacaaggggctttttcacctctta 110
              |||||||||||||||| |||||||
Sbjct: 173138 tacaaggggctttttcccctctta 173115

>emb|BX248326.14| Zebrafish DNA sequence from clone DKEY-260N20 in linkage group 20,
            complete sequence
          Length = 182841

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 110  atacatgaatgaattacaaa 129
            ||||||||||||||||||||
Sbjct: 9777 atacatgaatgaattacaaa 9796

>emb|AL928940.12| Mouse DNA sequence from clone RP23-94J17 on chromosome 2, complete
              sequence
          Length = 115994

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 161    ctactttgtatgctgatcat 180
              ||||||||||||||||||||
Sbjct: 115080 ctactttgtatgctgatcat 115099

>emb|AL929142.6| Mouse DNA sequence from clone RP23-340A13 on chromosome 2, complete
            sequence
          Length = 207823

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ctactttgtatgctgatcat 180
            ||||||||||||||||||||
Sbjct: 1086 ctactttgtatgctgatcat 1105


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,798,343
Number of Sequences: 3902068
Number of extensions: 2798343
Number of successful extensions: 74748
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74712
Number of HSP's gapped (non-prelim): 36
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)