>HUG1_HUMAN (O75698) Protein HUG-1 (HOX11 upstream gene 1 protein)|
          Length = 362

 Score = 31.2 bits (69), Expect = 0.65
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 330 PEAPVAV*WTVGDGVRWWPLEDSCLGRKFFQHFPFTFGC 214
           P  P ++ W     VR W   DS  G+  F H    +GC
Sbjct: 268 PGRPNSISWAAAASVRLWARRDSSSGQLLFVHEDHAYGC 306

>QCRB_MYCLE (P15878) Ubiquinol-cytochrome c reductase cytochrome b subunit|
          Length = 551

 Score = 30.8 bits (68), Expect = 0.85
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 253 AKILPAFSFYVWLHTTPSPL 194
           A+I PA+ FY W HT P+P+
Sbjct: 316 ARIWPAWEFYFWHHTIPAPV 335

>QCRB_MYCTU (P63885) Ubiquinol-cytochrome c reductase cytochrome b subunit|
          Length = 549

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 253 AKILPAFSFYVWLHTTPSPL 194
           A+I P + FY W HT P+P+
Sbjct: 317 ARIWPPWEFYFWHHTIPAPV 336

>QCRB_MYCBO (P63886) Ubiquinol-cytochrome c reductase cytochrome b subunit|
          Length = 549

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 253 AKILPAFSFYVWLHTTPSPL 194
           A+I P + FY W HT P+P+
Sbjct: 317 ARIWPPWEFYFWHHTIPAPV 336

>HOS3_YEAST (Q02959) Histone deacetylase HOS3|
          Length = 697

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +2

Query: 185 DLPKRTRSSMQPNVKGKCWKNFRPRHESSNGHHRTPSPTVHH 310
           ++ K+        +K K WKN   R    NG ++ PS T  H
Sbjct: 620 EIEKKGDEDSDHELKEKNWKNSHQRRLQGNGMYKIPSNTKPH 661

>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)|
            (Somatostatin receptor-interacting protein)
            (SSTR-interacting protein) (SSTRIP)
          Length = 2161

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 26/98 (26%), Positives = 33/98 (33%), Gaps = 20/98 (20%)
 Frame = +2

Query: 119  PLPPITHHPPKDENEKR*P--------------------**CDLPKRTRSSMQPNVKGKC 238
            PLPP  HHPP   +    P                       D P R     QP+++G  
Sbjct: 992  PLPPAHHHPPHHHHHHAPPPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRG-- 1049

Query: 239  WKNFRPRHESSNGHHRTPSPTVHHTATGASGLPQDGGL 352
            W+   P           PSP+ H +A G  G  Q   L
Sbjct: 1050 WRGGGPSPTPG-----APSPSHHGSAGGGGGSSQGPAL 1082

>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 242 KNFRPRHESSNGHHRTPSPTVHHTATGASG 331
           K  +PR  S  G H +P  + HH+++  SG
Sbjct: 310 KRDKPRSTSPAGQHHSPISSRHHSSSSQSG 339

>YIBL_AZOVI (P96194) Putative HTH-type transcriptional regulator in ibpB-leuC|
           intergenic region
          Length = 144

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = -3

Query: 348 PPSCGSPEAPVAV*-WTVGDGVRWWPLEDSC 259
           PP C    AP+    WT    +R WP   SC
Sbjct: 107 PPCCAPSPAPIRRWRWTSASSIRKWPTRRSC 137

>VPS33_SCHPO (Q9P7V6) Vacuolar protein sorting 33|
          Length = 592

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +2

Query: 11  GPFYYHINR*LHETIASRRQGKTINQI 91
           GP+   I R L      RRQ KT+NQI
Sbjct: 291 GPYLSKIARKLSSDFEGRRQAKTVNQI 317

>TYRO_RANNI (Q04604) Tyrosinase precursor (EC 1.14.18.1) (Monophenol|
           monooxygenase)
          Length = 532

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = +3

Query: 186 TYLSGLGVVCNQT*KENAGRIFAQGTN--PPMATTGPHHRRSITRRP 320
           ++ S   ++C++  + N+ RI   GTN  P + + G H R    R P
Sbjct: 271 SFFSSWQIICSRPEEYNSLRIICNGTNEGPLLRSPGRHDRNRTPRLP 317

>GRHL3_HUMAN (Q8TE85) Grainyhead-like protein 3 homolog (Sister of mammalian|
           grainyhead) (Transcription factor CP2-like 4)
          Length = 626

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 14/36 (38%), Positives = 16/36 (44%)
 Frame = -1

Query: 347 HHPVEALKLRSPCDGPSVMGSGGGHWRIRALGENSS 240
           H P + L+   P      MG G G WR R L  N S
Sbjct: 577 HPPPDCLECSHPVTQVRNMGFGDGFWRQRDLDSNPS 612

>LY75_MOUSE (Q60767) Lymphocyte antigen 75 precursor (DEC-205) (CD205 antigen)|
          Length = 1723

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
 Frame = -3

Query: 297 GDGVRWW------PLEDSCLG--RKFFQHFPFTFG 217
           G+  +WW      P++   LG  R+ + HFP TFG
Sbjct: 868 GEEQKWWVKTSENPIDRYFLGSRRRLWHHFPMTFG 902

>MSH3_MOUSE (P13705) DNA mismatch repair protein Msh3 (Repair-3 protein)|
           (REP-1)
          Length = 1091

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 266 IRALGENSSSIFLLRLVAYYS*SA*VG 186
           ++A+G+N SS+F  +L A Y+ S  +G
Sbjct: 273 LKAIGDNKSSVFSRKLTALYTKSTLIG 299

>GLNA2_SOYBN (O82560) Glutamine synthetase cytosolic isozyme 2 (EC 6.3.1.2)|
           (Glutamate--ammonia ligase) (GS1-2)
          Length = 356

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 361 MIAETTILWKP 329
           MIAETTILWKP
Sbjct: 346 MIAETTILWKP 356

>GLNA2_PHAVU (P04771) Glutamine synthetase PR-2 (EC 6.3.1.2) (Gln isozyme alpha)|
           (Glutamate--ammonia ligase)
          Length = 356

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 361 MIAETTILWKP 329
           MIAETTILWKP
Sbjct: 346 MIAETTILWKP 356

>GLNA1_VITVI (P51118) Glutamine synthetase cytosolic isozyme 1 (EC 6.3.1.2)|
           (Glutamate--ammonia ligase)
          Length = 356

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 361 MIAETTILWKP 329
           MIAETTILWKP
Sbjct: 346 MIAETTILWKP 356

>SNIP1_MOUSE (Q8BIZ6) Smad nuclear-interacting protein 1|
          Length = 383

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +2

Query: 194 KRTRSSMQPNVKGKCWKNFRPRHESSNGHHRTPSPTVHHTA 316
           KR++S   P VK K  +   PR    +  HR PS   H  A
Sbjct: 87  KRSQSPHYPMVKVKQEREDHPRRGREDRQHREPSEQEHRRA 127

>GLNA_PINSY (P52783) Glutamine synthetase cytosolic isozyme (EC 6.3.1.2)|
           (Glutamate--ammonia ligase) (GS1)
          Length = 357

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -2

Query: 361 MIAETTILWKP 329
           MIAETTILWKP
Sbjct: 347 MIAETTILWKP 357


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,097,314
Number of Sequences: 219361
Number of extensions: 1064318
Number of successful extensions: 3440
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3439
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)