Clone Name | rbart60c02 |
---|---|
Clone Library Name | barley_pub |
>emb|CR925859.4| Zebrafish DNA sequence from clone CH211-160L12 in linkage group 10, complete sequence Length = 24181 Score = 42.1 bits (21), Expect = 0.35 Identities = 21/21 (100%) Strand = Plus / Minus Query: 58 caaaagcacaaacaaacgaac 78 ||||||||||||||||||||| Sbjct: 9811 caaaagcacaaacaaacgaac 9791
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tgaacaacacgcggtttcag 56 |||||||||||||||||||| Sbjct: 192841 tgaacaacacgcggtttcag 192822
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 tgaacaacacgcggtttcag 56 |||||||||||||||||||| Sbjct: 192840 tgaacaacacgcggtttcag 192821
>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the 3' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), complete sequence Length = 183815 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 tctgtactctgaacaacac 46 ||||||||||||||||||| Sbjct: 20292 tctgtactctgaacaacac 20310
>emb|AJ630363.1| Canis familiaris MHC class II region on chromosome CFA12, partial sequence, BAC clones 224p2 and 282j14, containing DLA-DQA1 gene, DLA-DQB1 gene and DLA-DQB pseudogene Length = 180560 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 tttcagtcaaaagcacaaa 69 ||||||||||||||||||| Sbjct: 85430 tttcagtcaaaagcacaaa 85412
>ref|XM_694825.1| PREDICTED: Danio rerio similar to Zinc finger protein 180 (HHZ168) (LOC571254), partial mRNA Length = 1020 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 gtttcagtcaaaagcacaa 68 ||||||||||||||||||| Sbjct: 334 gtttcagtcaaaagcacaa 352
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 tttcagtcaaaagcacaaacaaa 73 ||||||||||||||| ||||||| Sbjct: 27415534 tttcagtcaaaagcataaacaaa 27415556
>dbj|AP006460.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0003M19 Length = 171790 Score = 38.2 bits (19), Expect = 5.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 51 tttcagtcaaaagcacaaacaaa 73 ||||||||||||||| ||||||| Sbjct: 121195 tttcagtcaaaagcataaacaaa 121217
>emb|AJ270774.1|HSA270774 Homo sapiens partial TCF-4 gene for T-cell transcription factor-4, exons 6-11 Length = 24413 Score = 38.2 bits (19), Expect = 5.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 tctgtactctgaacaacac 46 ||||||||||||||||||| Sbjct: 14243 tctgtactctgaacaacac 14261 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 855,066 Number of Sequences: 3902068 Number of extensions: 855066 Number of successful extensions: 61884 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61809 Number of HSP's gapped (non-prelim): 75 length of query: 118 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 97 effective length of database: 17,151,101,840 effective search space: 1663656878480 effective search space used: 1663656878480 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)