>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)|
            (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase
            class VI type 11C)
          Length = 1132

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 124  YFFFLRIPRYITTWVYVLLCLFVSLFARV 38
            YF F ++   ++TW+ ++L +F+SLF  +
Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085

>VGLM_BUNSH (P04875) M polyprotein precursor [Contains: Glycoprotein G2;|
           Nonstructural protein NS-M; Glycoprotein G1]
          Length = 1441

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
 Frame = -2

Query: 130 ISYFFFLRIPRYITTWVYVLLCLFVSL--------FARVGRLYEQQCDVF 5
           I++++F+ I  Y  TW  +++ L + L        F+ +  +Y ++CD++
Sbjct: 354 INFYYFVCIMNYAVTWGLIIIGLLIGLLFKKYQHRFSNLYAMYCEECDMY 403

>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)|
           (Fragment)
          Length = 347

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = -2

Query: 124 YFFFLRIPRYITTWVYVLLCLFVSLFARV 38
           YF F ++   ++TW+ ++L +F+SLF  +
Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313

>RT03_ACACA (P46754) Mitochondrial ribosomal protein S3|
          Length = 298

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 202 FGRLITLVNLFPVLCVMRDV*CSAISYFFFLRIPRYITTW 83
           F R   L  +F +     +V  + IS FFF+R+ +Y T W
Sbjct: 169 FSRSSFLSKIFIIGLSKMNVNANIISEFFFIRLTQYYTIW 208

>M130_STRPU (P08472) Mesenchyme-specific cell surface glycoprotein precursor|
           (MSP130)
          Length = 779

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 56  NK*TKQYINPSGNVTWNTKEKKVGNGRALHVTHHT 160
           N  TK+Y+NP G +T       V NG +  + + T
Sbjct: 202 NNYTKKYVNPEGTITTVRLAGSVSNGPSQQIVNTT 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,746,561
Number of Sequences: 219361
Number of extensions: 798474
Number of successful extensions: 1751
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1751
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 1359926328
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)