ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LYXK_ECOLI (P37677) L-xylulose/3-keto-L-gulonate kinase (EC 2.7.... 28 9.3

>LYXK_ECOLI (P37677) L-xylulose/3-keto-L-gulonate kinase (EC 2.7.1.53) (EC|
           2.7.1.-) (L-xylulokinase) (3-dehydro-L-gulonate kinase)
          Length = 498

 Score = 27.7 bits (60), Expect = 9.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -2

Query: 73  PLRKTCKWTGHPLSSLWW 20
           PL +   WTGHP+S L W
Sbjct: 124 PLTRQTLWTGHPVSLLRW 141


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,663,390
Number of Sequences: 219361
Number of extensions: 266835
Number of successful extensions: 780
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 80,573,946
effective HSP length: 16
effective length of database: 77,064,170
effective search space used: 1849540080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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