Clone Information

BLAST Search Result

Clone Name	rbart60b08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (...	33	0.17
2	PGS2_CANFA (Q29393) Decorin precursor (Bone proteoglycan II) (PG...	31	0.63
3	PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing pr...	31	0.63
4	PGS2_MOUSE (P28654) Decorin precursor (Bone proteoglycan II) (PG...	31	0.82
5	PGS2_RAT (Q01129) Decorin precursor (Bone proteoglycan II) (PG-S...	30	1.1
6	PGS2_RABIT (Q28888) Decorin precursor (Bone proteoglycan II) (PG...	30	1.1
7	BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11...	30	1.1
8	BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precurso...	30	1.1
9	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	30	1.4
10	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	30	1.4
11	PGS2_COTJA (Q9DE68) Decorin precursor (Bone proteoglycan II) (PG...	30	1.8
12	PGS2_PANTR (Q5R1V9) Decorin precursor (Bone proteoglycan II) (PG...	30	1.8
13	PGS2_HUMAN (P07585) Decorin precursor (Bone proteoglycan II) (PG...	30	1.8
14	PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phospha...	30	1.8
15	PGS2_CHICK (P28675) Decorin precursor (Bone proteoglycan II) (PG...	30	1.8
16	RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2...	29	2.4
17	PGS2_HORSE (O46542) Decorin precursor (Bone proteoglycan II) (PG...	29	2.4
18	LRC40_XENLA (Q6GPJ5) Leucine-rich repeat-containing protein 40	29	2.4
19	CP1A1_LIZSA (Q9W683) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)	29	2.4
20	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	29	2.4
21	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	29	2.4
22	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	29	2.4
23	PGS2_PIG (Q9XSD9) Decorin precursor (Bone proteoglycan II) (PG-S2)	29	3.1
24	SMCA1_HUMAN (P28370) Probable global transcription activator SNF...	29	3.1
25	CP1A1_LIZAU (O42231) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)	29	3.1
26	CPN2_HUMAN (P22792) Carboxypeptidase N subunit 2 precursor (Carb...	28	4.1
27	LRC57_XENLA (Q6INV3) Leucine-rich repeat-containing protein 57	28	4.1
28	EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E...	28	4.1
29	LPP_CHICK (Q5F464) Lipoma-preferred partner homolog	28	4.1
30	KS6AA_CHICK (P18652) Ribosomal protein S6 kinase 2 alpha (EC 2.7...	28	5.3
31	CNGC2_ARATH (O65718) Cyclic nucleotide-gated ion channel 2 (AtCN...	28	5.3
32	PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing pr...	28	5.3
33	FINC_XENLA (Q91740) Fibronectin precursor (FN)	28	5.3
34	PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11...	28	6.9
35	RL10_PYRHO (O58367) 50S ribosomal protein L10e	28	6.9
36	LRC40_BRARE (Q7SXW3) Leucine-rich repeat-containing protein 40	27	9.1
37	PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epith...	27	9.1
38	PSIP1_MOUSE (Q99JF8) PC4 and SFRS1-interacting protein (Lens epi...	27	9.1
39	LRC40_XENTR (Q5M8G4) Leucine-rich repeat-containing protein 40	27	9.1
40	RSC1_SCHPO (O74964) Chromatin structure remodeling complex prote...	27	9.1
41	G6PD6_ARATH (Q9FJI5) Glucose-6-phosphate 1-dehydrogenase, cytopl...	27	9.1
42	SWR1_YEAST (Q05471) Helicase SWR1 (EC 3.6.1.-) (Swi2/Snf2-relate...	27	9.1
43	PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (...	27	9.1
44	TMM_ARATH (Q9SSD1) TOO MANY MOUTHS protein precursor (TMM)	27	9.1
45	AMYM_BACAD (P32818) Maltogenic alpha-amylase (EC 3.2.1.133) (Glu...	27	9.1

>CLV1_ARATH (Q9SYQ8) Receptor protein kinase CLAVATA1 precursor (EC 2.7.11.1)|
          Length = 980

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFR 288
           +YL NN F G IP  +   P L+ L+++ N+FR
Sbjct: 461 IYLSNNWFSGEIPPAIGNFPNLQTLFLDRNRFR 493

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>PGS2_CANFA (Q29393) Decorin precursor (Bone proteoglycan II) (PG-S2)|
          Length = 360

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LDNN  I R+P GL +H +++ +Y+  N
Sbjct: 275 LHLDNNKLI-RVPGGLAEHKYIQVVYLHNN 303

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>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein phosphatase|
            (EC 3.1.3.16) (PH domain leucine-rich repeat protein
            phosphatase) (Pleckstrin homology domain-containing
            family E protein 1) (Suprachiasmatic nucleus circadian
            oscillatory
          Length = 1717

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = -3

Query: 386  LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSRSKGMHKVLELPEADL 231
            LYL NN+   +    L  HP LK L++  N+ +    SK M K+ EL E DL
Sbjct: 1017 LYLTNNSLTDKCVPLLTGHPHLKILHMAYNRLQSFPASK-MAKLEELEEIDL 1067

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>PGS2_MOUSE (P28654) Decorin precursor (Bone proteoglycan II) (PG-S2) (PG40)|
          Length = 354

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LDNN  + R+P GL +H +++ +Y+  N
Sbjct: 269 LHLDNNKLL-RVPAGLAQHKYIQVVYLHNN 297

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>PGS2_RAT (Q01129) Decorin precursor (Bone proteoglycan II) (PG-S2) (PG40)|
           (Dermatan sulfate proteoglycan-II) (DSPG)
          Length = 354

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LDNN  + R+P GL +H +++ +Y+  N
Sbjct: 269 LHLDNNKLL-RVPAGLAQHKYVQVVYLHNN 297

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>PGS2_RABIT (Q28888) Decorin precursor (Bone proteoglycan II) (PG-S2)|
          Length = 360

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LDNN  I R+P GL  H +++ +Y+  N
Sbjct: 275 LHLDNNKLI-RVPGGLADHKYIQVVYLHNN 303

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>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)|
           (Brassinosteroid LRR receptor kinase)
          Length = 1207

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPF--LKELYIEGNQFR 288
           L + +NN  G IP G+ K P   LK LY++ N F+
Sbjct: 406 LDMSSNNLTGIIPSGICKDPMNNLKVLYLQNNLFK 440



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 389 YLYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFR 288
           +L L NN F+G +P+       L+ LY+ GN F+
Sbjct: 285 FLNLTNNQFVGLVPK--LPSESLQYLYLRGNDFQ 316

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>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC|
           2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1)
           (Systemin receptor SR160)
          Length = 1207

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPF--LKELYIEGNQFR 288
           L + +NN  G IP G+ K P   LK LY++ N F+
Sbjct: 406 LDMSSNNLTGVIPSGICKDPMNNLKVLYLQNNLFK 440



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 389 YLYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFR 288
           +L L NN F+G +P+       L+ LY+ GN F+
Sbjct: 285 FLNLTNNQFVGLVPK--LPSESLQYLYLRGNDFQ 316

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -2

Query: 249 VTRGRPLGLTKLIKRGPVVYSARQQPPFFISTRRGGEKYRMF*DVVYDI 103
           + RGR LG+T  +  G  + ++RQ+    IST  GG   R+  +++Y +
Sbjct: 437 IPRGRALGVTFFLPEGDAISASRQKLESQISTLYGG---RLAEEIIYGV 482

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -2

Query: 249 VTRGRPLGLTKLIKRGPVVYSARQQPPFFISTRRGGEKYRMF*DVVYDI 103
           + RGR LG+T  +  G  + ++RQ+    IST  GG   R+  +++Y +
Sbjct: 437 IPRGRALGVTFFLPEGDAISASRQKLESQISTLYGG---RLAEEIIYGV 482

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>PGS2_COTJA (Q9DE68) Decorin precursor (Bone proteoglycan II) (PG-S2)|
          Length = 356

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKHPFLKELYIEGNQ 294
           NNN + R+P GL +H +++ +Y+  N+
Sbjct: 274 NNNELVRVPSGLGEHKYIQVVYLHNNK 300

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>PGS2_PANTR (Q5R1V9) Decorin precursor (Bone proteoglycan II) (PG-S2)|
          Length = 359

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LDNN  + R+P GL +H +++ +Y+  N
Sbjct: 274 LHLDNNK-LTRVPGGLAEHKYIQVVYLHNN 302

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>PGS2_HUMAN (P07585) Decorin precursor (Bone proteoglycan II) (PG-S2) (PG40)|
          Length = 359

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 12/30 (40%), Positives = 21/30 (70%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LDNN  + R+P GL +H +++ +Y+  N
Sbjct: 274 LHLDNNK-LTRVPGGLAEHKYIQVVYLHNN 302

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>PHLPP_RAT (Q9WTR8) PH domain leucine-rich repeat protein phosphatase (EC|
            3.1.3.16) (Pleckstrin homology domain-containing family E
            protein 1) (Suprachiasmatic nucleus circadian oscillatory
            protein)
          Length = 1696

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 20/52 (38%), Positives = 28/52 (53%)
 Frame = -3

Query: 386  LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSRSKGMHKVLELPEADL 231
            LYL NN+   +    L  HP LK L++  N+ +    SK M K+ EL E D+
Sbjct: 980  LYLTNNSLTDKCVPLLTGHPRLKILHMAYNRLQSFPASK-MAKLEELEEIDI 1030

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>PGS2_CHICK (P28675) Decorin precursor (Bone proteoglycan II) (PG-S2)|
          Length = 357

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKHPFLKELYIEGNQ 294
           NNN + R+P GL +H +++ +Y+  N+
Sbjct: 275 NNNELVRVPSGLGEHKYIQVVYLHNNK 301

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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LD+N F G +P  L     L+ELY+  N
Sbjct: 193 LWLDDNQFSGPVPSSLGNITTLQELYLNDN 222



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQ 294
           LYL  N+F GRIP  L K   + +L ++ NQ
Sbjct: 313 LYLAGNHFSGRIPPELGKCKSMIDLQLQQNQ 343

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>PGS2_HORSE (O46542) Decorin precursor (Bone proteoglycan II) (PG-S2) (Dermatan|
           sulfate proteoglycan II) (DS-PGII)
          Length = 360

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L+LDNN  I ++P GL  H +++ +Y+  N
Sbjct: 275 LHLDNNKLI-KVPGGLADHKYIQVVYLHNN 303

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>LRC40_XENLA (Q6GPJ5) Leucine-rich repeat-containing protein 40|
          Length = 605

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSR---SKGMHKVLE 249
           +NN IG +P+ L   P LK L ++GN  R   R   +KG  ++L+
Sbjct: 320 SNNDIGSLPDTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLK 364

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>CP1A1_LIZSA (Q9W683) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSR 276
           +YL   +F  +IPEGL + P  K L I GN    GSR
Sbjct: 27  VYLIIKSFQDKIPEGLSRLPGPKPLPIIGNVLEVGSR 63

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -2

Query: 249 VTRGRPLGLTKLIKRGPVVYSARQQPPFFISTRRGGEKYRMF*DVVY 109
           + RGR LG+T  +  G  + ++RQ+    IST  GG   R+  +++Y
Sbjct: 437 IPRGRALGVTFFLPEGDAISASRQKLESQISTLYGG---RLAEEIIY 480

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -2

Query: 249 VTRGRPLGLTKLIKRGPVVYSARQQPPFFISTRRGGEKYRMF*DVVY 109
           + RGR LG+T  +  G  + ++RQ+    IST  GG   R+  +++Y
Sbjct: 437 IPRGRALGVTFFLPEGDAISASRQKLESQISTLYGG---RLAEEIIY 480

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -2

Query: 249 VTRGRPLGLTKLIKRGPVVYSARQQPPFFISTRRGGEKYRMF*DVVY 109
           + RGR LG+T  +  G  + ++RQ+    IST  GG   R+  +++Y
Sbjct: 437 IPRGRALGVTFFLPEGDAISASRQKLESQISTLYGG---RLAEEIIY 480

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>PGS2_PIG (Q9XSD9) Decorin precursor (Bone proteoglycan II) (PG-S2)|
          Length = 360

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKHPFLKELYIEGN 297
           NNN + ++P GL +H +++ +Y+  N
Sbjct: 278 NNNKLNKVPGGLAEHKYIQVVYLHNN 303

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>SMCA1_HUMAN (P28370) Probable global transcription activator SNF2L1 (EC|
           3.6.1.-) (ATP-dependent helicase SMARCA1)
           (SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 1)
          Length = 976

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 14/54 (25%)
 Frame = +1

Query: 235 SASGNSSTLCIPFDLLP--------------GLNWFPSMYSSFRNGCLYNPSGI 354
           S S  +S +CI F++ P              GLNW  S+Y +  NG L +  G+
Sbjct: 81  SESRKTSNVCIRFEVSPSYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGL 134

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>CP1A1_LIZAU (O42231) Cytochrome P450 1A1 (EC 1.14.14.1) (CYPIA1)|
          Length = 521

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSR 276
           +YL   +F   IPEGL + P  K L I GN    GSR
Sbjct: 27  VYLIIKSFQANIPEGLSRLPGPKPLPIIGNVLEVGSR 63

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>CPN2_HUMAN (P22792) Carboxypeptidase N subunit 2 precursor (Carboxypeptidase N|
           polypeptide 2) (Carboxypeptidase N 83 kDa chain)
           (Carboxypeptidase N regulatory subunit)
           (Carboxypeptidase N large subunit)
          Length = 545

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKH-PFLKELYIEGNQFR 288
           N N +  +PEGL++H   L+ L+++GNQ +
Sbjct: 129 NFNMLEALPEGLFQHLAALESLHLQGNQLQ 158

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>LRC57_XENLA (Q6INV3) Leucine-rich repeat-containing protein 57|
          Length = 238

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKHPFLKELYIEGNQ 294
           NNN I R+P+ L K   L+ L++ GNQ
Sbjct: 69  NNNRISRLPDELCKLKKLETLHLNGNQ 95

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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQ 294
           L LD+NNF G IP+ L+K   L E     N+
Sbjct: 429 LDLDSNNFTGEIPKSLWKSTNLMEFTASYNR 459



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSRSKGMHKVLELPE 240
           L L NN   G IPE L+K P L  L ++ N F  G   K + K   L E
Sbjct: 406 LLLTNNQINGSIPEDLWKLP-LMALDLDSNNF-TGEIPKSLWKSTNLME 452

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>LPP_CHICK (Q5F464) Lipoma-preferred partner homolog|
          Length = 604

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKHPFLKELYI 306
           ++N +G+ P G+Y+HP  K+ YI
Sbjct: 329 SSNTVGQAPPGMYQHPGPKKTYI 351

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>KS6AA_CHICK (P18652) Ribosomal protein S6 kinase 2 alpha (EC 2.7.11.1)|
           (Ribosomal protein S6 kinase II alpha) (S6KII-alpha)
           (P90-RSK) (MAP kinase-activated protein kinase 1)
           (MAPK-activated protein kinase 1) (MAPKAP kinase 1)
           (MAPKAPK-1)
          Length = 752

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = -2

Query: 171 PFFISTRRGGEKYRMF*---DVVYDISV*LVARELFLSPHCSMTSLHVLQ 31
           P  I TR GG K+ +     D + D++  LV++ L + PH  +T+  VLQ
Sbjct: 639 PEEILTRIGGGKFSVNGGNWDTISDVAKDLVSKMLHVDPHQRLTAKQVLQ 688

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>CNGC2_ARATH (O65718) Cyclic nucleotide-gated ion channel 2 (AtCNGC2) (Cyclic|
           nucleotide-and calmodulin-regulated ion channel 2)
           (DEFENSE NO DEATH 1)
          Length = 726

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
 Frame = +1

Query: 154 CGDEEWWL----LPRRINNRPTLYELG*TERSASGNSSTLCIPFDLLPGL 291
           C D EWW+    LP R+  R   +E      +A G    L +  DL PGL
Sbjct: 466 CRDMEWWMKRRQLPSRLRQRVRRFER--QRWNALGGEDELELIHDLPPGL 513

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>PHLPP_MOUSE (Q8CHE4) PH domain leucine-rich repeat-containing protein phosphatase|
            (EC 3.1.3.16) (PH domain leucine-rich repeat protein
            phosphatase) (Pleckstrin homology domain-containing
            family E protein 1) (Suprachiasmatic nucleus circadian
            oscillatory
          Length = 1687

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = -3

Query: 386  LYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSRSKGMHKVLELPEADL 231
            LYL NN    +    L  HP LK L++  N+ +    SK M K+ EL E D+
Sbjct: 973  LYLTNNCLTDKCVPLLTGHPRLKILHMAYNRLQSFPASK-MAKLEELEEIDI 1023

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>FINC_XENLA (Q91740) Fibronectin precursor (FN)|
          Length = 2481

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 187  RINNRPTLYELG*TERSASGNSSTLCIPFDLLPGLNWFPSMYS 315
            RI+  PT  ++G +     G S T C+  +L PG+ +  S+Y+
Sbjct: 1207 RISTTPTPMQVGNSLEEEVGPSQTYCVFENLSPGVEYNVSVYA 1249

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>PSKR_DAUCA (Q8LPB4) Phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1021

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = -3

Query: 389 YLYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSRSKGMHKVLELPEADL 231
           YL L +NN  G IP+ L++   L  L ++ N+   G+ S  + K+  L   D+
Sbjct: 210 YLGLASNNLSGSIPQELFQLSNLSVLALQNNRL-SGALSSKLGKLSNLGRLDI 261

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>RL10_PYRHO (O58367) 50S ribosomal protein L10e|
          Length = 181

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -2

Query: 297 PV*AGKQVKRNAQGARVTRGRPLGLTKLIKRGPVVYSAR 181
           P+  G++  R   G R   G+P+GL   +KR   + S R
Sbjct: 98  PMATGRKADRYGNGMRRPFGKPIGLAARLKRDQKILSIR 136

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>LRC40_BRARE (Q7SXW3) Leucine-rich repeat-containing protein 40|
          Length = 601

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 371 NNFIGRIPEGLYKHPFLKELYIEGNQFRPGSR---SKGMHKVLE 249
           NN I  +P GL   P LK L +EGN  R   R   +KG  ++L+
Sbjct: 319 NNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLK 362

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>PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor)
          Length = 528

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 212 MSLVKPRGRPRVTRAPC 262
           + + KPRGRP+V + PC
Sbjct: 187 VKIPKPRGRPKVVKQPC 203

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>PSIP1_MOUSE (Q99JF8) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor)
          Length = 528

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 212 MSLVKPRGRPRVTRAPC 262
           + + KPRGRP+V + PC
Sbjct: 187 VKIPKPRGRPKVVKQPC 203

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>LRC40_XENTR (Q5M8G4) Leucine-rich repeat-containing protein 40|
          Length = 605

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -3

Query: 374 NNNFIGRIPEGLYKHPFLKELYIEGNQFRPGSR---SKGMHKVLE 249
           +NN +G +P  L   P LK L +EGN  R   R   +KG  ++L+
Sbjct: 320 SNNDLGSLPCTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLK 364

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>RSC1_SCHPO (O74964) Chromatin structure remodeling complex protein rsc1|
           (Remodel the structure of chromatin complex subunit 1)
          Length = 803

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = +1

Query: 232 RSASGNSSTLCIPFDLLPGLNWFPSMYSSFRNGCLYNPSGILPMKLLLSKYRY 390
           R   G+   L  PF+ LP    FP  Y +     +  P  +  ++  LSK+RY
Sbjct: 224 RYRDGSGRQLFAPFERLPDPRMFPEYYQA-----IEQPMALEVIQKKLSKHRY 271

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>G6PD6_ARATH (Q9FJI5) Glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform 2|
           (EC 1.1.1.49) (G6PD6) (G6PDH6)
          Length = 515

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 172 TILHLHTTRWREIPYVLGRG 113
           TIL +H  RW  +P++L  G
Sbjct: 340 TILRIHNERWEGVPFILKAG 359

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>SWR1_YEAST (Q05471) Helicase SWR1 (EC 3.6.1.-) (Swi2/Snf2-related 1)|
          Length = 1514

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 286 GLNWFPSMYSSFRNGCLYNPSGI 354
           GLNW  S+Y++  NG L +  G+
Sbjct: 703 GLNWLASLYNNHTNGILADEMGL 725

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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -3

Query: 389 YLYLDNNNFIGRIPEGLYKHPFLKELYIEGNQFRP 285
           YL L NN+F G IP+ L K   L    I  N+  P
Sbjct: 467 YLDLSNNSFTGEIPKSLTKLESLTSRNISVNEPSP 501

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>TMM_ARATH (Q9SSD1) TOO MANY MOUTHS protein precursor (TMM)|
          Length = 496

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 386 LYLDNNNFIGRIPEGLYKHPFLKELYIEGN 297
           L L N N  G IP+ L +   L+ L++EGN
Sbjct: 332 LVLSNTNIQGSIPKSLTRLNSLRVLHLEGN 361

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>AMYM_BACAD (P32818) Maltogenic alpha-amylase (EC 3.2.1.133) (Glucan|
           1,4-alpha-maltohydrolase)
          Length = 586

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -3

Query: 371 NNFIGRIPEGLYKH-PFLKELYIEGNQFRPGSRSKGMHK 258
           +NF G   EG+ +H  +LKEL I G  F P  ++   HK
Sbjct: 168 DNFFGGDLEGVIEHIDYLKELGIGGIYFTPIFKAHSNHK 206


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,141,698
Number of Sequences: 219361
Number of extensions: 1131222
Number of successful extensions: 2950
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2950
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result