ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60b05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY107565.1| Zea mays PCO081097 mRNA sequence 228 1e-56
2gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 194 2e-46
3gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 194 2e-46
4gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative l... 194 2e-46
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
6dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
7dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 2e-46
8ref|XM_476136.1| Oryza sativa (japonica cultivar-group), predic... 192 6e-46
9ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
10dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 4e-07
11ref|NM_188436.1| Oryza sativa (japonica cultivar-group), predic... 62 1e-06
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
13dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
14dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
15dbj|AK105422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
16dbj|AK103614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 1e-06
17ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predic... 60 6e-06
18dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
19dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
20dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
21dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
22dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
23dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
24dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
25dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
26dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
27dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
28gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence 58 2e-05
29ref|XM_476139.1| Oryza sativa (japonica cultivar-group), predic... 56 9e-05
30gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full... 52 0.001
31gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, comp... 52 0.001
32gb|AY103823.1| Zea mays PCO141891 mRNA sequence 52 0.001
33gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, comp... 48 0.022
34ref|NM_188443.1| Oryza sativa (japonica cultivar-group), predic... 46 0.086
35gb|AC021651.17| Homo sapiens 12 BAC RP11-498B21 (Roswell Park Ca... 46 0.086
36dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.086
37dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.086
38dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.086
39ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa815... 44 0.34
40ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa815... 44 0.34
41ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa814... 44 0.34
42gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.34
43gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.34
44dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
45dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.34
46dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
47dbj|AK069388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
48dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.34
49gb|AY108995.1| Zea mays PCO109727 mRNA sequence 44 0.34
50gb|AY104167.1| Zea mays PCO062696 mRNA sequence 44 0.34
51gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Can... 44 0.34
52gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete se... 42 1.4
53emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on ch... 42 1.4
54emb|AL096709.11|HSDJ20N4 Human DNA sequence from clone RP1-20N4 ... 42 1.4
55ref|XM_965306.1| PREDICTED: Tribolium castaneum similar to CG394... 42 1.4
56gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cance... 42 1.4
57gb|AE005972.1| Caulobacter crescentus CB15 section 298 of 359 of... 42 1.4
58gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, comp... 42 1.4
59gb|AC093781.2| Homo sapiens BAC clone RP11-183D16 from 4, comple... 42 1.4
60gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, compl... 42 1.4
61dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
62dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
63gb|AC022517.1|AC022517 Homo sapiens chromosome 19, BC335474 (CIT... 42 1.4
64dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
65dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
66emb|CR925735.15| Zebrafish DNA sequence from clone CH211-105G15 ... 42 1.4
67gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.4
68ref|XM_515097.1| PREDICTED: Pan troglodytes similar to tissue in... 40 5.3
69gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence 40 5.3
70gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, compl... 40 5.3
71gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 40 5.3
72gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, comp... 40 5.3
73gb|AY521557.1| Cancer magister clone Cma14 microsatellite sequence 40 5.3
74gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 5.3
75gb|AC120120.2| Homo sapiens chromosome 5 clone RP11-458K15, comp... 40 5.3
76gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, comple... 40 5.3
77emb|CR361548.8| Zebrafish DNA sequence from clone CH211-140M22 i... 40 5.3
78emb|Z72521.1|HSN29F4 Human DNA sequence from clone LL22NC03-29F4... 40 5.3
79gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full... 40 5.3
80gb|BT009047.1| Triticum aestivum clone wdk9n.pk001.k24:fis, full... 40 5.3
81emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section... 40 5.3
82emb|Z49782.1|BSDNA320D B.subtilis chromosomal DNA (region 320-32... 40 5.3
83emb|BX957284.5| Zebrafish DNA sequence from clone CH211-10N1 in ... 40 5.3
84emb|BX548161.12| Zebrafish DNA sequence from clone DKEY-248F6 in... 40 5.3
85gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, com... 40 5.3
86emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in ... 40 5.3
87gb|AY758220.1| Spartina alterniflora clone Spar.24 microsatellit... 40 5.3
88emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in... 40 5.3
89gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map... 40 5.3
90gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, com... 40 5.3
91gb|AC155321.2| Pan troglodytes BAC clone CH251-489N11 from chrom... 40 5.3
92gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, com... 40 5.3
93gb|DQ207726.1| Aspergillus niger strain N909 mitochondrion, comp... 40 5.3
94gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102... 40 5.3
95gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 40 5.3
96emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 5.3
97gb|AC101789.9| Mus musculus chromosome 1, clone RP24-150F11, com... 40 5.3
98gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, co... 40 5.3
99gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 40 5.3
100gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cance... 40 5.3
101emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in l... 40 5.3
102gb|AC122464.3| Mus musculus BAC clone RP24-301O17 from 6, comple... 40 5.3
103gb|AC147053.3| Mus musculus BAC clone RP23-87B16 from 6, complet... 40 5.3
104gb|AC148332.3| Mus musculus BAC clone RP23-326L8 from 6, complet... 40 5.3
105gb|AC150746.2| Mus musculus BAC clone RP23-364B18 from 6, comple... 40 5.3
106gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complet... 40 5.3
107emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 40 5.3
108emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chr... 40 5.3
109emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chro... 40 5.3
110gb|M23964.1|MUSPGK1PS4 Mus musculus phosphoglycerate kinase (Pgk... 40 5.3 
>gb|AY107565.1| Zea mays PCO081097 mRNA sequence
          Length = 916

 Score =  228 bits (115), Expect = 1e-56
 Identities = 181/203 (89%)
 Strand = Plus / Minus

                                                                       
Query: 197 gatcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggag 256
           |||||||||  |||| | ||||||||||| ||||||||||||||||| | ||| ||||||
Sbjct: 611 gatcagtgctggatgggagggctgcagtaggggcccttgagccagccgtcggcaatggag 552

                                                                       
Query: 257 cggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagag 316
           ||||| |||||||||||||| |||||||||||||||||||||||||||  |||||| | |
Sbjct: 551 cggtaggccgcctcggtgaggtggatgccgtcccagatgaggtagttgcccgggtcggcg 492

                                                                       
Query: 317 caggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgc 376
           |||||||| |||||||||||||||||||  |||||||||||||||  ||||| |||||||
Sbjct: 491 caggcgctggccccggccatgccgcaccgcgccttgttgttgtagccgtactggccctgc 432

                                  
Query: 377 ccgccggctccgcagcacacctt 399
           |||||||| |||||||| |||||
Sbjct: 431 ccgccggcgccgcagcagacctt 409
to top
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Minus

                                                                         
Query: 198   atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 257
             ||||||| | |||| | ||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 10490 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 10431

                                                                         
Query: 258   ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 317
             |||| || |||||||| || |||||||||||||||||||||||||||  |||||| | ||
Sbjct: 10430 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 10371

                                                                         
Query: 318   aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 377
             ||||||| | ||||| |||||||||||  || |||||||||||||||||| | |||||||
Sbjct: 10370 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 10311

                                   
Query: 378   cgccggctccgcagcacacctt 399
             | || || ||||||||||||||
Sbjct: 10310 ctcccgccccgcagcacacctt 10289



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 245   ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
             ||||||||| ||||||| | |||||||||||| |||||||||||||||
Sbjct: 46209 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 46162



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 266   gcctcggtgagatggatgccgtcccagatgaggtag 301
             ||||||||||||||||||||||||||| ||| ||||
Sbjct: 61848 gcctcggtgagatggatgccgtcccagttgacgtag 61813
to top
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0016G07, complete sequence
          Length = 123167

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Minus

                                                                         
Query: 198   atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 257
             ||||||| | |||| | ||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 77391 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 77332

                                                                         
Query: 258   ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 317
             |||| || |||||||| || |||||||||||||||||||||||||||  |||||| | ||
Sbjct: 77331 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 77272

                                                                         
Query: 318   aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 377
             ||||||| | ||||| |||||||||||  || |||||||||||||||||| | |||||||
Sbjct: 77271 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 77212

                                   
Query: 378   cgccggctccgcagcacacctt 399
             | || || ||||||||||||||
Sbjct: 77211 ctcccgccccgcagcacacctt 77190



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                              
Query: 245    ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
              ||||||||| ||||||| | |||||||||||| |||||||||||||||
Sbjct: 113110 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 113063
to top
>gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative lipase mRNA, complete
            cds
          Length = 1413

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Minus

                                                                        
Query: 198  atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 257
            ||||||| | |||| | ||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 1149 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1090

                                                                        
Query: 258  ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 317
            |||| || |||||||| || |||||||||||||||||||||||||||  |||||| | ||
Sbjct: 1089 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1030

                                                                        
Query: 318  aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 377
            ||||||| | ||||| |||||||||||  || |||||||||||||||||| | |||||||
Sbjct: 1029 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 970

                                  
Query: 378  cgccggctccgcagcacacctt 399
            | || || ||||||||||||||
Sbjct: 969  ctcccgccccgcagcacacctt 948
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Minus

                                                                           
Query: 198     atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 257
               ||||||| | |||| | ||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 6706229 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 6706170

                                                                           
Query: 258     ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 317
               |||| || |||||||| || |||||||||||||||||||||||||||  |||||| | ||
Sbjct: 6706169 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 6706110

                                                                           
Query: 318     aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 377
               ||||||| | ||||| |||||||||||  || |||||||||||||||||| | |||||||
Sbjct: 6706109 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 6706050

                                     
Query: 378     cgccggctccgcagcacacctt 399
               | || || ||||||||||||||
Sbjct: 6706049 ctcccgccccgcagcacacctt 6706028



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                               
Query: 245     ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
               ||||||||| ||||||| | |||||||||||| |||||||||||||||
Sbjct: 6741948 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 6741901



 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                   
Query: 266     gcctcggtgagatggatgccgtcccagatgaggtag 301
               ||||||||||||||||||||||||||| ||| ||||
Sbjct: 6757587 gcctcggtgagatggatgccgtcccagttgacgtag 6757552
to top
>dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I03, full
            insert sequence
          Length = 1410

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Minus

                                                                        
Query: 198  atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 257
            ||||||| | |||| | ||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 1153 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1094

                                                                        
Query: 258  ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 317
            |||| || |||||||| || |||||||||||||||||||||||||||  |||||| | ||
Sbjct: 1093 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1034

                                                                        
Query: 318  aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 377
            ||||||| | ||||| |||||||||||  || |||||||||||||||||| | |||||||
Sbjct: 1033 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 974

                                  
Query: 378  cgccggctccgcagcacacctt 399
            | || || ||||||||||||||
Sbjct: 973  ctcccgccccgcagcacacctt 952
to top
>dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B05, full
            insert sequence
          Length = 1422

 Score =  194 bits (98), Expect = 2e-46
 Identities = 176/202 (87%)
 Strand = Plus / Minus

                                                                        
Query: 198  atcagtgcaagatgcgggggctgcagtaagggcccttgagccagccattggcgatggagc 257
            ||||||| | |||| | ||| ||||||| ||||||||||||||||||| |||||||||||
Sbjct: 1164 atcagtggaggatgggagggttgcagtaggggcccttgagccagccatcggcgatggagc 1105

                                                                        
Query: 258  ggtacgccgcctcggtgagatggatgccgtcccagatgaggtagttgtgcgggtcagagc 317
            |||| || |||||||| || |||||||||||||||||||||||||||  |||||| | ||
Sbjct: 1104 ggtaggcggcctcggtaaggtggatgccgtcccagatgaggtagttggccgggtcggcgc 1045

                                                                        
Query: 318  aggcgctcgccccggccatgccgcaccttgccttgttgttgtagttgtacttgccctgcc 377
            ||||||| | ||||| |||||||||||  || |||||||||||||||||| | |||||||
Sbjct: 1044 aggcgctggacccggacatgccgcaccgcgctttgttgttgtagttgtacgtcccctgcc 985

                                  
Query: 378  cgccggctccgcagcacacctt 399
            | || || ||||||||||||||
Sbjct: 984  ctcccgccccgcagcacacctt 963
to top
>ref|XM_476136.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score =  192 bits (97), Expect = 6e-46
 Identities = 160/181 (88%)
 Strand = Plus / Minus

                                                                        
Query: 219  tgcagtaagggcccttgagccagccattggcgatggagcggtacgccgcctcggtgagat 278
            ||||||| ||||||||||||||||||| ||||||||||||||| || |||||||| || |
Sbjct: 1066 tgcagtaggggcccttgagccagccatcggcgatggagcggtaggcggcctcggtaaggt 1007

                                                                        
Query: 279  ggatgccgtcccagatgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgc 338
            ||||||||||||||||||||||||||  |||||| | ||||||||| | ||||| |||||
Sbjct: 1006 ggatgccgtcccagatgaggtagttggccgggtcggcgcaggcgctggacccggacatgc 947

                                                                        
Query: 339  cgcaccttgccttgttgttgtagttgtacttgccctgcccgccggctccgcagcacacct 398
            ||||||  || |||||||||||||||||| | |||||||| || || |||||||||||||
Sbjct: 946  cgcaccgcgctttgttgttgtagttgtacgtcccctgccctcccgccccgcagcacacct 887

             
Query: 399  t 399
            |
Sbjct: 886  t 886
to top
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1113

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 245  ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||| ||||||| | |||||||||||| |||||||||||||||
Sbjct: 1043 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 996
to top
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full
            insert sequence
          Length = 1551

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                            
Query: 245  ttggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||| ||||||| | |||||||||||| |||||||||||||||
Sbjct: 1133 ttggcgatgaagcggtagggcgcctcggtgaggtggatgccgtcccag 1086
to top
>ref|NM_188436.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1095

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 130/163 (79%)
 Strand = Plus / Minus

                                                                        
Query: 234  tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 293
            ||||||| ||||  ||||| || ||||| || ||||||||||| || ||||| |||||||
Sbjct: 1060 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1001

                                                                        
Query: 294  tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 353
              | ||| || | ||||||    ||||| || ||||| | |||||| ||||| |||||||
Sbjct: 1000 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 941

                                                       
Query: 354  tgttgtagttgtacttgccctgcccgccggctccgcagcacac 396
            | |||||||||||   ||| ||||| ||||| |||||||||||
Sbjct: 940  tattgtagttgtaggagccttgcccaccggcgccgcagcacac 898
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 130/163 (79%)
 Strand = Plus / Minus

                                                                           
Query: 234     tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 293
               ||||||| ||||  ||||| || ||||| || ||||||||||| || ||||| |||||||
Sbjct: 6269493 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 6269434

                                                                           
Query: 294     tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 353
                 | ||| || | ||||||    ||||| || ||||| | |||||| ||||| |||||||
Sbjct: 6269433 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 6269374

                                                          
Query: 354     tgttgtagttgtacttgccctgcccgccggctccgcagcacac 396
               | |||||||||||   ||| ||||| ||||| |||||||||||
Sbjct: 6269373 tattgtagttgtaggagccttgcccaccggcgccgcagcacac 6269331



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                         
Query: 235     gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
               ||||||||| |||||||||  || ||| | |||||||||||| |||||||||||||||
Sbjct: 6282199 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 6282142



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 258     ggtacgccgcctcggtgagatggatgccgtcccag 292
               ||||||||||||||||||| || | ||||||||||
Sbjct: 6305210 ggtacgccgcctcggtgaggtgcacgccgtcccag 6305176



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 263     gccgcctcggtgagatggatgccgtcccag 292
               |||||||| ||||| |||||||||||||||
Sbjct: 6380761 gccgcctccgtgaggtggatgccgtcccag 6380732



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 263     gccgcctcggtgagatggatgccgtcccag 292
               |||||||| ||||| |||||||||||||||
Sbjct: 6365981 gccgcctccgtgaggtggatgccgtcccag 6365952



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 263     gccgcctcggtgagatggatgccgtcccag 292
               |||||||| ||||| |||||||||||||||
Sbjct: 6342892 gccgcctccgtgaggtggatgccgtcccag 6342863
to top
>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0038J17
          Length = 180186

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 130/163 (79%)
 Strand = Plus / Minus

                                                                          
Query: 234    tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 293
              ||||||| ||||  ||||| || ||||| || ||||||||||| || ||||| |||||||
Sbjct: 131691 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 131632

                                                                          
Query: 294    tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 353
                | ||| || | ||||||    ||||| || ||||| | |||||| ||||| |||||||
Sbjct: 131631 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 131572

                                                         
Query: 354    tgttgtagttgtacttgccctgcccgccggctccgcagcacac 396
              | |||||||||||   ||| ||||| ||||| |||||||||||
Sbjct: 131571 tattgtagttgtaggagccttgcccaccggcgccgcagcacac 131529



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 235    gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
              ||||||||| |||||||||  || ||| | |||||||||||| |||||||||||||||
Sbjct: 144397 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 144340



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 258    ggtacgccgcctcggtgagatggatgccgtcccag 292
              ||||||||||||||||||| || | ||||||||||
Sbjct: 167408 ggtacgccgcctcggtgaggtgcacgccgtcccag 167374
to top
>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0515G01
          Length = 175072

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 130/163 (79%)
 Strand = Plus / Minus

                                                                         
Query: 234   tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 293
             ||||||| ||||  ||||| || ||||| || ||||||||||| || ||||| |||||||
Sbjct: 40559 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 40500

                                                                         
Query: 294   tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 353
               | ||| || | ||||||    ||||| || ||||| | |||||| ||||| |||||||
Sbjct: 40499 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 40440

                                                        
Query: 354   tgttgtagttgtacttgccctgcccgccggctccgcagcacac 396
             | |||||||||||   ||| ||||| ||||| |||||||||||
Sbjct: 40439 tattgtagttgtaggagccttgcccaccggcgccgcagcacac 40397



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 235   gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
             ||||||||| |||||||||  || ||| | |||||||||||| |||||||||||||||
Sbjct: 53265 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 53208



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 258   ggtacgccgcctcggtgagatggatgccgtcccag 292
             ||||||||||||||||||| || | ||||||||||
Sbjct: 76276 ggtacgccgcctcggtgaggtgcacgccgtcccag 76242



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 263    gccgcctcggtgagatggatgccgtcccag 292
              |||||||| ||||| |||||||||||||||
Sbjct: 151827 gccgcctccgtgaggtggatgccgtcccag 151798



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 263    gccgcctcggtgagatggatgccgtcccag 292
              |||||||| ||||| |||||||||||||||
Sbjct: 137047 gccgcctccgtgaggtggatgccgtcccag 137018



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 263    gccgcctcggtgagatggatgccgtcccag 292
              |||||||| ||||| |||||||||||||||
Sbjct: 113958 gccgcctccgtgaggtggatgccgtcccag 113929
to top
>dbj|AK105422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-B12, full
            insert sequence
          Length = 1772

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 130/163 (79%)
 Strand = Plus / Minus

                                                                        
Query: 234  tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 293
            ||||||| ||||  ||||| || ||||| || ||||||||||| || ||||| |||||||
Sbjct: 1493 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1434

                                                                        
Query: 294  tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 353
              | ||| || | ||||||    ||||| || ||||| | |||||| ||||| |||||||
Sbjct: 1433 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 1374

                                                       
Query: 354  tgttgtagttgtacttgccctgcccgccggctccgcagcacac 396
            | |||||||||||   ||| ||||| ||||| |||||||||||
Sbjct: 1373 tattgtagttgtaggagccttgcccaccggcgccgcagcacac 1331
to top
>dbj|AK103614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133K20, full
            insert sequence
          Length = 1416

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 130/163 (79%)
 Strand = Plus / Minus

                                                                        
Query: 234  tgagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccaga 293
            ||||||| ||||  ||||| || ||||| || ||||||||||| || ||||| |||||||
Sbjct: 1137 tgagccatccatccgcgatcgaacggtaggcagcctcggtgaggtgaatgccatcccaga 1078

                                                                        
Query: 294  tgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgccgcaccttgccttgt 353
              | ||| || | ||||||    ||||| || ||||| | |||||| ||||| |||||||
Sbjct: 1077 ccaagtaattctccgggtctccacaggcacttgcccctgacatgccacacctcgccttgt 1018

                                                       
Query: 354  tgttgtagttgtacttgccctgcccgccggctccgcagcacac 396
            | |||||||||||   ||| ||||| ||||| |||||||||||
Sbjct: 1017 tattgtagttgtaggagccttgcccaccggcgccgcagcacac 975
to top
>ref|NM_188437.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 235  gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||| |||||||||  || ||| | |||||||||||| |||||||||||||||
Sbjct: 1071 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 1014
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                 
Query: 259     gtacgccgcctcggtgagatggatgccgtcccag 292
               |||||||||||| |||||||||||||||||||||
Sbjct: 2894454 gtacgccgcctccgtgagatggatgccgtcccag 2894421



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 266     gcctcggtgagatggatgccgtcccag 292
               ||||||||||| |||||||||||||||
Sbjct: 2907403 gcctcggtgaggtggatgccgtcccag 2907429



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                         
Query: 236      agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
                ||||||||||||||||   ||||||| || || ||||| |  |||||||||||||||
Sbjct: 19518616 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 19518672



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 341     caccttgccttgttgttgtagttgtacttgcc 372
               ||||| || ||||||||||||||| |||||||
Sbjct: 2907478 cacctcgcgttgttgttgtagttgaacttgcc 2907509
to top
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085L11
          Length = 148142

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                                
Query: 259    gtacgccgcctcggtgagatggatgccgtcccag 292
              |||||||||||| |||||||||||||||||||||
Sbjct: 137935 gtacgccgcctccgtgagatggatgccgtcccag 137902
to top
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046E09
          Length = 146776

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                               
Query: 259   gtacgccgcctcggtgagatggatgccgtcccag 292
             |||||||||||| |||||||||||||||||||||
Sbjct: 54600 gtacgccgcctccgtgagatggatgccgtcccag 54567



 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 266   gcctcggtgagatggatgccgtcccag 292
             ||||||||||| |||||||||||||||
Sbjct: 67549 gcctcggtgaggtggatgccgtcccag 67575



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 341   caccttgccttgttgttgtagttgtacttgcc 372
             ||||| || ||||||||||||||| |||||||
Sbjct: 67624 cacctcgcgttgttgttgtagttgaacttgcc 67655
to top
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full
            insert sequence
          Length = 1430

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 259  gtacgccgcctcggtgagatggatgccgtcccag 292
            |||||||||||| |||||||||||||||||||||
Sbjct: 1088 gtacgccgcctccgtgagatggatgccgtcccag 1055
to top
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full
            insert sequence
          Length = 1429

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 259  gtacgccgcctcggtgagatggatgccgtcccag 292
            |||||||||||| |||||||||||||||||||||
Sbjct: 1087 gtacgccgcctccgtgagatggatgccgtcccag 1054
to top
>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full
           insert sequence
          Length = 1356

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 235 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
           ||||||||| |||||||||  || ||| | |||||||||||| |||||||||||||||
Sbjct: 995 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 938
to top
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full
            insert sequence
          Length = 1417

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 259  gtacgccgcctcggtgagatggatgccgtcccag 292
            |||||||||||| |||||||||||||||||||||
Sbjct: 1085 gtacgccgcctccgtgagatggatgccgtcccag 1052
to top
>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full
            insert sequence
          Length = 1583

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 235  gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||| |||||||||  || ||| | |||||||||||| |||||||||||||||
Sbjct: 1223 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 1166
to top
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full
            insert sequence
          Length = 1450

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 259  gtacgccgcctcggtgagatggatgccgtcccag 292
            |||||||||||| |||||||||||||||||||||
Sbjct: 1085 gtacgccgcctccgtgagatggatgccgtcccag 1052
to top
>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full
           insert sequence
          Length = 1356

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 235 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
           ||||||||| |||||||||  || ||| | |||||||||||| |||||||||||||||
Sbjct: 995 gagccagcccttggcgatgtggccgtaggacgcctcggtgaggtggatgccgtcccag 938
to top
>gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence
          Length = 811

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 259 gtacgccgcctcggtgagatggatgccgtcccagatgaggt 299
           |||||| ||||||||||| ||||||||||||||| ||||||
Sbjct: 508 gtacgcggcctcggtgaggtggatgccgtcccagctgaggt 468
to top
>ref|XM_476139.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 266  gcctcggtgagatggatgccgtcccagatgaggtag 301
            ||||||||||||||||||||||||||| ||| ||||
Sbjct: 1064 gcctcggtgagatggatgccgtcccagttgacgtag 1029
to top
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA
            sequence
          Length = 1634

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 266  gcctcggtgagatggatgccgtcccagatgaggt 299
            ||||||||||| ||||||||||||||| ||||||
Sbjct: 1180 gcctcggtgaggtggatgccgtcccagctgaggt 1147
to top
>gb|AC116365.2| Homo sapiens chromosome 5 clone RP11-797O11, complete sequence
          Length = 117723

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 142   catcaagtcaataaataaaacaataa 167
             ||||||||||||||||||||||||||
Sbjct: 72002 catcaagtcaataaataaaacaataa 72027
to top
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence
          Length = 1313

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                              
Query: 266  gcctcggtgagatggatgccgtcccagatgaggt 299
            ||||||||||| ||||||||||||||| ||||||
Sbjct: 1131 gcctcggtgaggtggatgccgtcccagctgaggt 1098
to top
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence
          Length = 201917

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 63    aaaattcatcatattagttgttac 86
             ||||||||||||||||||||||||
Sbjct: 82727 aaaattcatcatattagttgttac 82750
to top
>ref|NM_188443.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1128

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 258  ggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||||||||||||| || | ||||||||||
Sbjct: 1045 ggtacgccgcctcggtgaggtgcacgccgtcccag 1011
to top
>gb|AC021651.17| Homo sapiens 12 BAC RP11-498B21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 67150

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 370   gccctgcccgccggctccgcagc 392
             |||||||||||||||||||||||
Sbjct: 35902 gccctgcccgccggctccgcagc 35924
to top
>dbj|AK102384.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092C19, full
            insert sequence
          Length = 1623

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 258  ggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||||||||||||| || | ||||||||||
Sbjct: 1228 ggtacgccgcctcggtgaggtgcacgccgtcccag 1194
to top
>dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I09, full
            insert sequence
          Length = 1392

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 266  gcctcggtgagatggatgccgtcccag 292
            ||||||||||| |||||||||||||||
Sbjct: 1029 gcctcggtgaggtggatgccgtcccag 1003



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 341 caccttgccttgttgttgtagttgtacttgcc 372
           ||||| || ||||||||||||||| |||||||
Sbjct: 954 cacctcgcgttgttgttgtagttgaacttgcc 923
to top
>dbj|AK059318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-H05, full
            insert sequence
          Length = 1622

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 258  ggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||||||||||||| || | ||||||||||
Sbjct: 1227 ggtacgccgcctcggtgaggtgcacgccgtcccag 1193
to top
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA
          Length = 1110

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 263  gccgcctcggtgagatggatgccgtcccag 292
            |||||||| ||||| |||||||||||||||
Sbjct: 1034 gccgcctccgtgaggtggatgccgtcccag 1005
to top
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA
          Length = 1137

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 263  gccgcctcggtgagatggatgccgtcccag 292
            |||||||| ||||| |||||||||||||||
Sbjct: 1061 gccgcctccgtgaggtggatgccgtcccag 1032
to top
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA
          Length = 1194

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 263  gccgcctcggtgagatggatgccgtcccag 292
            |||||||| ||||| |||||||||||||||
Sbjct: 1067 gccgcctccgtgaggtggatgccgtcccag 1038
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 247      ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
                ||||||| || |||| || |||||||||||||| | ||||||||||
Sbjct: 14135818 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 14135773
to top
>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0012F18, from chromosome 3, complete sequence
          Length = 122903

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 247   ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
             ||||||| || |||| || |||||||||||||| | ||||||||||
Sbjct: 10109 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 10064
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                              
Query: 247      ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
                ||||||| || |||| || |||||||||||||| | ||||||||||
Sbjct: 14130793 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 14130748
to top
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0665D10
          Length = 134967

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 263  gccgcctcggtgagatggatgccgtcccag 292
            |||||||| ||||| |||||||||||||||
Sbjct: 3156 gccgcctccgtgaggtggatgccgtcccag 3127
to top
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full
            insert sequence
          Length = 1526

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 263  gccgcctcggtgagatggatgccgtcccag 292
            |||||||| ||||| |||||||||||||||
Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
to top
>dbj|AK069388.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012H01, full
           insert sequence
          Length = 942

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                         
Query: 247 ggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
           ||||||| || |||| || |||||||||||||| | ||||||||||
Sbjct: 676 ggcgatgtagtggtaggcggcctcggtgagatgcaggccgtcccag 631
to top
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full
            insert sequence
          Length = 1531

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 263  gccgcctcggtgagatggatgccgtcccag 292
            |||||||| ||||| |||||||||||||||
Sbjct: 1137 gccgcctccgtgaggtggatgccgtcccag 1108
to top
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence
          Length = 847

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                     
Query: 235 gagccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
           |||||||||  ||||||||  || ||| || ||||| ||||| |||||||||||||||
Sbjct: 354 gagccagcccctggcgatgtggccgtaggcggcctccgtgaggtggatgccgtcccag 297
to top
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence
          Length = 1460

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 260  tacgccgcctcggtgagatggatgccgtcccagatgag 297
            ||||||||||| || || ||||||||||||||| ||||
Sbjct: 1098 tacgccgcctccgtcaggtggatgccgtcccagctgag 1061
to top
>gb|AC153957.4| Mus musculus 10 BAC RP24-502B21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 182105

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 11     acatctacagttttatttattctgtg 36
              |||||||||||||||||||| |||||
Sbjct: 119290 acatctacagttttatttatactgtg 119265
to top
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence
          Length = 112873

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 61    ataaaattcatcatattagtt 81
             |||||||||||||||||||||
Sbjct: 79674 ataaaattcatcatattagtt 79694
to top
>emb|AL442646.14| Human DNA sequence from clone RP11-322A17 on chromosome X Contains a
              novel pseudogene and a lactate dehydrogenase B pseudogene,
              complete sequence
          Length = 155885

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     attcatcatattagttgttac 86
              |||||||||||||||||||||
Sbjct: 145867 attcatcatattagttgttac 145847
to top
>emb|AL096709.11|HSDJ20N4 Human DNA sequence from clone RP1-20N4 on chromosome 6q12-13 Contains a
             beclin 1 (BECN1) pseudogene, complete sequence
          Length = 138025

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 66    attcatcatattagttgttac 86
             |||||||||||||||||||||
Sbjct: 48232 attcatcatattagttgttac 48212
to top
>ref|XM_965306.1| PREDICTED: Tribolium castaneum similar to CG3943-PA (LOC658960),
           mRNA
          Length = 1081

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 278 tggatgccgtcccagatgaggtagt 302
           |||||||||||||||| ||||||||
Sbjct: 275 tggatgccgtcccagaagaggtagt 251
to top
>gb|AC092695.8| Homo sapiens 3 BAC RP11-81E19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 166471

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    ttatttattctgtggaggcaa 43
             |||||||||||||||||||||
Sbjct: 62634 ttatttattctgtggaggcaa 62654
to top
>gb|AE005972.1| Caulobacter crescentus CB15 section 298 of 359 of the complete genome
          Length = 11923

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 312  cagagcaggcgctcgccccgg 332
            |||||||||||||||||||||
Sbjct: 1004 cagagcaggcgctcgccccgg 1024
to top
>gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, complete sequence
          Length = 174399

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     attcatcatattagttgttac 86
              |||||||||||||||||||||
Sbjct: 156719 attcatcatattagttgttac 156739
to top
>gb|AC093781.2| Homo sapiens BAC clone RP11-183D16 from 4, complete sequence
          Length = 156058

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    attcatcatattagttgttac 86
             |||||||||||||||||||||
Sbjct: 20157 attcatcatattagttgttac 20177
to top
>gb|AC124768.4| Homo sapiens BAC clone RP11-1188G23 from 2, complete sequence
          Length = 95291

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    attcatcatattagttgttac 86
             |||||||||||||||||||||
Sbjct: 57779 attcatcatattagttgttac 57799
to top
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
           PAC clone:P0506C10
          Length = 150549

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                    
Query: 236 agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
           ||||||||||||||||   ||||||| || || ||||| |  |||||||||||||||
Sbjct: 348 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 404
to top
>dbj|AP004749.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0410C01
          Length = 138424

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 236    agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
              ||||||||||||||||   ||||||| || || ||||| |  |||||||||||||||
Sbjct: 137025 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 137081
to top
>gb|AC022517.1|AC022517 Homo sapiens chromosome 19, BC335474 (CIT-HSPC_482H14), complete sequence
          Length = 157566

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 212    cgggggctgcagtaagggcccttga 236
              |||||||||||||||||||| ||||
Sbjct: 109398 cgggggctgcagtaagggcctttga 109374
to top
>dbj|AK067909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123P18, full
            insert sequence
          Length = 1580

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 236  agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||||||||||   ||||||| || || ||||| |  |||||||||||||||
Sbjct: 1215 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 1159
to top
>dbj|AK061422.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-F12, full
            insert sequence
          Length = 1323

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                     
Query: 236  agccagccattggcgatggagcggtacgccgcctcggtgagatggatgccgtcccag 292
            ||||||||||||||||   ||||||| || || ||||| |  |||||||||||||||
Sbjct: 1211 agccagccattggcgacatagcggtaggcggcttcggtcatgtggatgccgtcccag 1155
to top
>emb|CR925735.15| Zebrafish DNA sequence from clone CH211-105G15 in linkage group 17,
             complete sequence
          Length = 83530

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 154   aaataaaacaataatacgtaa 174
             |||||||||||||||||||||
Sbjct: 45401 aaataaaacaataatacgtaa 45421
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 362    ttgtacttgccctgcccgccg 382
              |||||||||||||||||||||
Sbjct: 663869 ttgtacttgccctgcccgccg 663889
to top
>ref|XM_515097.1| PREDICTED: Pan troglodytes similar to tissue inhibitor of
           metalloproteinase 3; Tissue inhibitor of
           metalloproteinase-3; K222 expressed in degenerative
           retinas (LOC458784), mRNA
          Length = 1767

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gggcccttgagccagccatt 246
           ||||||||||||||||||||
Sbjct: 41  gggcccttgagccagccatt 60
to top
>gb|BT017832.1| Zea mays clone EL01N0509A10.c mRNA sequence
          Length = 1420

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 355  gttgtagttgtacttgccctgcccgccggctccgcagcac 394
            |||| ||||||| ||||||||||| || || |||||||||
Sbjct: 1080 gttgaagttgtagttgccctgccctcctgcgccgcagcac 1041
to top
>gb|AC107786.14| Mus musculus chromosome 5, clone RP23-5E3, complete sequence
          Length = 226673

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 146   aagtcaataaataaaacaataata 169
             |||| |||||||||||||||||||
Sbjct: 18594 aagtgaataaataaaacaataata 18571
to top
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   gcaggcgctcgccccggcca 335
             ||||||||||||||||||||
Sbjct: 53182 gcaggcgctcgccccggcca 53163
to top
>gb|AC157933.4| Mus musculus chromosome 5, clone RP24-189N4, complete sequence
          Length = 185286

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   aagtcaataaataaaacaataata 169
             |||| |||||||||||||||||||
Sbjct: 50229 aagtgaataaataaaacaataata 50252
to top
>gb|AY521557.1| Cancer magister clone Cma14 microsatellite sequence
          Length = 592

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 148 gtcaataaataaaacaataa 167
           ||||||||||||||||||||
Sbjct: 514 gtcaataaataaaacaataa 495
to top
>gb|AC079216.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-353E8, complete
              sequence
          Length = 221748

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 131    ctcacaaaacgcatcaagtcaata 154
              ||||||||||| ||||||||||||
Sbjct: 196345 ctcacaaaacgtatcaagtcaata 196322
to top
>gb|AC120120.2| Homo sapiens chromosome 5 clone RP11-458K15, complete sequence
          Length = 126549

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    tacagttttatttattctgt 35
             ||||||||||||||||||||
Sbjct: 30119 tacagttttatttattctgt 30100
to top
>gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, complete sequence
          Length = 216326

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   agtcaataaataaaacaata 166
             ||||||||||||||||||||
Sbjct: 82124 agtcaataaataaaacaata 82143
to top
>emb|CR361548.8| Zebrafish DNA sequence from clone CH211-140M22 in linkage group 1,
             complete sequence
          Length = 146409

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   aagtcaataaataaaacaataata 169
             |||||||||||||||| |||||||
Sbjct: 35536 aagtcaataaataaaaaaataata 35559
to top
>emb|Z72521.1|HSN29F4 Human DNA sequence from clone LL22NC03-29F4 on chromosome 22,
           complete sequence
          Length = 19912

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 227 gggcccttgagccagccatt 246
           ||||||||||||||||||||
Sbjct: 923 gggcccttgagccagccatt 942
to top
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA
           sequence
          Length = 1334

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 329 ccggccatgccgcaccttgccttgttgttgtagttgtacttgcc 372
           |||| |||||||||||| |||  ||| | |||||||||||||||
Sbjct: 994 ccggacatgccgcacctagccccgttctggtagttgtacttgcc 951
to top
>gb|BT009047.1| Triticum aestivum clone wdk9n.pk001.k24:fis, full insert mRNA
            sequence
          Length = 1226

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 71/88 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  ggatgccgtcccagatgaggtagttgtgcgggtcagagcaggcgctcgccccggccatgc 338
            |||||||||||||| | |  ||||| || |||||   ||||||||| |  |||| |||||
Sbjct: 1005 ggatgccgtcccagttcaaatagttctgagggtccttgcaggcgcttgagccggacatgc 946

                                        
Query: 339  cgcaccttgccttgttgttgtagttgta 366
            | ||||| ||||| || |||||||||||
Sbjct: 945  cacacctcgccttattattgtagttgta 918
to top
>emb|Z99123.2|BSUB0020 Bacillus subtilis complete genome (section 20 of 21): from 3809641 to
            4010779
          Length = 201139

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 376  cccgccggctccgcagcaca 395
            ||||||||||||||||||||
Sbjct: 3999 cccgccggctccgcagcaca 4018
to top
>emb|Z49782.1|BSDNA320D B.subtilis chromosomal DNA (region 320-321 degrees)
          Length = 25940

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 376  cccgccggctccgcagcaca 395
            ||||||||||||||||||||
Sbjct: 7164 cccgccggctccgcagcaca 7145
to top
>emb|BX957284.5| Zebrafish DNA sequence from clone CH211-10N1 in linkage group 10,
             complete sequence
          Length = 60530

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   caataaataaaacaataata 169
             ||||||||||||||||||||
Sbjct: 58629 caataaataaaacaataata 58610
to top
>emb|BX548161.12| Zebrafish DNA sequence from clone DKEY-248F6 in linkage group 16,
              complete sequence
          Length = 188754

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    tcccaccacgcacactcaca 136
              ||||||||||||||||||||
Sbjct: 136272 tcccaccacgcacactcaca 136253
to top
>gb|AC008763.9| Homo sapiens chromosome 19 clone CTD-3214H19, complete sequence
          Length = 177962

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 338    ccgcaccttgccttgttgttgtag 361
              |||||||| |||||||||||||||
Sbjct: 142999 ccgcacctggccttgttgttgtag 143022
to top
>emb|BX640477.6| Zebrafish DNA sequence from clone DKEY-43N16 in linkage group 10,
           complete sequence
          Length = 258048

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 caataaataaaacaataata 169
           ||||||||||||||||||||
Sbjct: 99  caataaataaaacaataata 80
to top
>gb|AY758220.1| Spartina alterniflora clone Spar.24 microsatellite sequence
          Length = 559

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 ttgttgttgtagttgtactt 369
           ||||||||||||||||||||
Sbjct: 530 ttgttgttgtagttgtactt 549
to top
>emb|BX530719.4| Zebrafish DNA sequence from clone DKEYP-51D11 in linkage group 14,
              complete sequence
          Length = 197865

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    aataaataaaacaataatac 170
              ||||||||||||||||||||
Sbjct: 141814 aataaataaaacaataatac 141833
to top
>gb|AC006304.4| Arabidopsis thaliana chromosome 2 clone T1O16 map mi398, complete
             sequence
          Length = 89281

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 158   aaaacaataatacgtaaatcaaca 181
             |||| |||||||||||||||||||
Sbjct: 80305 aaaataataatacgtaaatcaaca 80328
to top
>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence
          Length = 171413

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 153   taaataaaacaataatacgtaaat 176
             ||||||| ||||||||||||||||
Sbjct: 27749 taaataatacaataatacgtaaat 27726
to top
>gb|AC155321.2| Pan troglodytes BAC clone CH251-489N11 from chromosome unknown, complete
              sequence
          Length = 202104

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    gggcccttgagccagccatt 246
              ||||||||||||||||||||
Sbjct: 109690 gggcccttgagccagccatt 109671
to top
>gb|AC158573.5| Mus musculus chromosome 8, clone RP23-101F17, complete sequence
          Length = 204567

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 146   aagtcaataaataaaacaataata 169
             |||| |||||||||||||||||||
Sbjct: 92719 aagtaaataaataaaacaataata 92696
to top
>gb|DQ207726.1| Aspergillus niger strain N909 mitochondrion, complete genome
          Length = 31103

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    acatctacagttttatttat 30
             ||||||||||||||||||||
Sbjct: 11416 acatctacagttttatttat 11435
to top
>gb|AC008812.7|AC008812 Homo sapiens chromosome 19 clone CTD-2102F19, complete sequence
          Length = 143619

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 338   ccgcaccttgccttgttgttgtag 361
             |||||||| |||||||||||||||
Sbjct: 15297 ccgcacctggccttgttgttgtag 15320
to top
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   gcaggcgctcgccccggcca 335
             ||||||||||||||||||||
Sbjct: 52857 gcaggcgctcgccccggcca 52838
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 318     aggcgctcgccccggccatgccgc 341
               ||||||| ||||||||||||||||
Sbjct: 3030070 aggcgctggccccggccatgccgc 3030047
to top
>gb|AC101789.9| Mus musculus chromosome 1, clone RP24-150F11, complete sequence
          Length = 150474

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 146   aagtcaataaataaaacaataata 169
             |||||||||||||||| |||||||
Sbjct: 94351 aagtcaataaataaaaaaataata 94328
to top
>gb|AC112948.12| Mus musculus chromosome 8, clone RP23-299I18, complete sequence
          Length = 197546

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 146  aagtcaataaataaaacaataata 169
            |||| |||||||||||||||||||
Sbjct: 9906 aagtaaataaataaaacaataata 9929
to top
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 49      ttaattacccccataaaattcatcatat 76
               |||||| |||||||||||| ||||||||
Sbjct: 3254160 ttaatttcccccataaaatccatcatat 3254187
to top
>gb|AC153639.4| Mus musculus 6 BAC RP23-124H2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190211

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   tcaataaataaaacaataat 168
             ||||||||||||||||||||
Sbjct: 44283 tcaataaataaaacaataat 44302
to top
>emb|BX548043.5| Zebrafish DNA sequence from clone DKEY-81J8 in linkage group 10, complete
              sequence
          Length = 156034

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    caataaataaaacaataata 169
              ||||||||||||||||||||
Sbjct: 130724 caataaataaaacaataata 130743
to top
>gb|AC122464.3| Mus musculus BAC clone RP24-301O17 from 6, complete sequence
          Length = 168611

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    tcaataaataaaacaataat 168
              ||||||||||||||||||||
Sbjct: 149868 tcaataaataaaacaataat 149887
to top
>gb|AC147053.3| Mus musculus BAC clone RP23-87B16 from 6, complete sequence
          Length = 218532

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 146    aagtcaataaataaaacaataata 169
              |||| |||||||||||||||||||
Sbjct: 211536 aagtgaataaataaaacaataata 211513
to top
>gb|AC148332.3| Mus musculus BAC clone RP23-326L8 from 6, complete sequence
          Length = 229988

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   aagtcaataaataaaacaataata 169
             |||| |||||||||||||||||||
Sbjct: 40446 aagtgaataaataaaacaataata 40469
to top
>gb|AC150746.2| Mus musculus BAC clone RP23-364B18 from 6, complete sequence
          Length = 215490

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 146    aagtcaataaataaaacaataata 169
              |||| |||||||||||||||||||
Sbjct: 145769 aagtgaataaataaaacaataata 145746
to top
>gb|AC134897.4| Mus musculus BAC clone RP23-459D9 from 6, complete sequence
          Length = 173574

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 131    ctcacaaaacgcatcaagtcaata 154
              ||||||||||| ||||||||||||
Sbjct: 121273 ctcacaaaacgtatcaagtcaata 121296
to top
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence,
             strain 2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   gcaggcgctcgccccggcca 335
             ||||||||||||||||||||
Sbjct: 49258 gcaggcgctcgccccggcca 49239
to top
>emb|AL611934.18| Mouse DNA sequence from clone RP23-472A8 on chromosome 4, complete
             sequence
          Length = 184866

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    tacatccacacatagacatg 103
             ||||||||||||||||||||
Sbjct: 18856 tacatccacacatagacatg 18837
to top
>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete
             sequence
          Length = 205436

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 152   ataaataaaacaataatacgtaaatcaacatt 183
             |||||||||||||| |||  ||||||||||||
Sbjct: 69099 ataaataaaacaattataattaaatcaacatt 69068
to top
>gb|M23964.1|MUSPGK1PS4 Mus musculus phosphoglycerate kinase (Pgk1-ps4) processed
           pseudogene
          Length = 1648

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 131 ctcacaaaacgcatcaagtcaata 154
           ||||||||||| ||||||||||||
Sbjct: 876 ctcacaaaacgtatcaagtcaata 853


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,465,928
Number of Sequences: 3902068
Number of extensions: 4465928
Number of successful extensions: 110683
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 110142
Number of HSP's gapped (non-prelim): 541
length of query: 399
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 377
effective length of database: 17,147,199,772
effective search space: 6464494314044
effective search space used: 6464494314044
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top