Clone Name | rbart60b02 |
---|---|
Clone Library Name | barley_pub |
>gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA, complete cds Length = 1067 Score = 299 bits (151), Expect = 4e-78 Identities = 266/305 (87%), Gaps = 17/305 (5%) Strand = Plus / Minus Query: 113 gcttcgatctgaaccaaacagcatgacgttcttcacatcatcgagacattc-------tg 165 |||||||||||||||||||| || || ||||||||||||||||| |||||| || Sbjct: 932 gcttcgatctgaaccaaacaacaggatgttcttcacatcatcgaaacattcgtgagactg 873 Query: 166 accaccacgcacgcacttttttatgttgccgaaggcatcatggaaaccaaacaccgaacg 225 |||||||| ||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 872 cccaccacgtacgcacttttt-atgttgccgaaggcattatgga---------ccgaacg 823 Query: 226 acccttcacatggatggcttagtagtcgttgctggcgacgggggtgtggttgtcgcacat 285 || |||| ||||| |||||||||||||||||| |||||||||| |||||| ||| ||||| Sbjct: 822 actcttcccatggctggcttagtagtcgttgccggcgacggggctgtggtcgtcccacat 763 Query: 286 gtacaggtaccggtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||| ||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 762 gtataggtatcggtaaacgacgccggcgaggccaccgccgatgagcgggccggcccagta 703 Query: 346 gatccagatgttggtgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggtt 405 | ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 702 aacccaaatgttggtgaagtcgccgctggcaacggcggggccgaaggagcgtgcagggtt 643 Query: 406 catgg 410 ||||| Sbjct: 642 catgg 638 Score = 117 bits (59), Expect = 3e-23 Identities = 85/93 (91%), Gaps = 3/93 (3%) Strand = Plus / Minus Query: 1 aatcgcataaggaaactcaactgaagaattctcaaaccccaacaacttcacaacatcaca 60 ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 1028 aatcgcataaggaaactcaactgaaaaattctcaaaccccaccaacttcacaacatcaca 969 Query: 61 ttatattacagatagagaagcatgcatcatcca 93 || ||||||||| || | ||||||||||||| Sbjct: 968 tt---ttacagataaaggaacatgcatcatcca 939
>gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA, complete cds Length = 829 Score = 295 bits (149), Expect = 6e-77 Identities = 164/169 (97%) Strand = Plus / Minus Query: 242 gcttagtagtcgttgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtag 301 |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 800 gcttagtagtcgttgccggcgacggcggtgtggtcgtcgcacatgtacaggtaccggtag 741 Query: 302 acgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtg 361 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 acgacgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtg 681 Query: 362 aagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 680 aagtcgccgctggcaacggcggggccgaaggagcgtgcagggttcatgg 632
>gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA, complete cds Length = 853 Score = 276 bits (139), Expect = 5e-71 Identities = 160/167 (95%) Strand = Plus / Minus Query: 244 ttagtagtcgttgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagac 303 |||||||||||||| |||||||| | |||||| |||||||||||||| |||||||||||| Sbjct: 801 ttagtagtcgttgccggcgacggagctgtggtcgtcgcacatgtacacgtaccggtagac 742 Query: 304 gatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaa 363 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 gacgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaa 682 Query: 364 gtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 681 gtcgccgctggcaacggcggggccgaaggagcgtgcagggttcatgg 635
>gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA, complete cds Length = 817 Score = 268 bits (135), Expect = 1e-68 Identities = 162/171 (94%) Strand = Plus / Minus Query: 240 tggcttagtagtcgttgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggt 299 |||||||||||||||||| |||||||| | |||||| |||||||||||| ||||| |||| Sbjct: 806 tggcttagtagtcgttgccggcgacggagctgtggtcgtcgcacatgtataggtatcggt 747 Query: 300 agacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttgg 359 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 746 agacgacgccggcgaggccaccgccgatgagcgggccggcccagtagacccagatgttgg 687 Query: 360 tgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 686 tgaagtcgccgctggcaacggcggggccgaaggagcgtgcagggttcatgg 636
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 13251125 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 13251066 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 13251065 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 13251006 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 13251005 cgacggcggggccgaaggagcgcgccgggttcatgg 13250970
>dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427E01 Length = 146395 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 12935 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 12876 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 12875 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 12816 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 12815 cgacggcggggccgaaggagcgcgccgggttcatgg 12780
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 168313 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 168254 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 168253 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 168194 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 168193 cgacggcggggccgaaggagcgcgccgggttcatgg 168158
>dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full insert sequence Length = 1194 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 825 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 766 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 765 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 706 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 705 cgacggcggggccgaaggagcgcgccgggttcatgg 670
>dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full insert sequence Length = 1214 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 827 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 768 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 767 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 708 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 707 cgacggcggggccgaaggagcgcgccgggttcatgg 672
>dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full insert sequence Length = 1197 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 828 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 769 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 768 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 709 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 708 cgacggcggggccgaaggagcgcgccgggttcatgg 673
>dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full insert sequence Length = 1195 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 826 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 767 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 766 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 707 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 706 cgacggcggggccgaaggagcgcgccgggttcatgg 671
>dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full insert sequence Length = 1202 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 828 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 769 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 768 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 709 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 708 cgacggcggggccgaaggagcgcgccgggttcatgg 673
>dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full insert sequence Length = 1220 Score = 182 bits (92), Expect = 6e-43 Identities = 140/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 826 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 767 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 766 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 707 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 706 cgacggcggggccgaaggagcgcgccgggttcatgg 671
>dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full insert sequence Length = 1196 Score = 174 bits (88), Expect = 1e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | |||||||||||||| |||||||| Sbjct: 827 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaccggtagacgaggccggcga 768 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 767 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 708 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||| ||||| ||||| || |||||||||| Sbjct: 707 cgacggcgggaccgaaggagcgcgccgggttcatgg 672
>dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full insert sequence Length = 1074 Score = 174 bits (88), Expect = 1e-40 Identities = 139/156 (89%) Strand = Plus / Minus Query: 255 tgctggcgacgggggtgtggttgtcgcacatgtacaggtaccggtagacgatgccggcga 314 ||||||| ||||||| ||||| | |||||||||| | ||| |||||||||| |||||||| Sbjct: 705 tgctggcaacgggggcgtggtcgccgcacatgtagacgtaacggtagacgaggccggcga 646 Query: 315 ggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctgg 374 |||| ||||||| ||| |||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 645 ggccgccgccgacgagggggccgacccagtagatccagatgttggtgtagtcgccgctgg 586 Query: 375 caacggcggggccgaatgagcgtgcagggttcatgg 410 | |||||||||||||| ||||| || |||||||||| Sbjct: 585 cgacggcggggccgaaggagcgcgccgggttcatgg 550
>gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA, complete cds Length = 1073 Score = 83.8 bits (42), Expect = 4e-13 Identities = 98/114 (85%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 357 |||||||| ||| ||||| || |||||||||||||||||| ||||||||| |||| || Sbjct: 763 gtagacgaggccagcgagtccgccgccgatgagcgggccgacccagtagacccagttgcc 704 Query: 358 ggtgaagtc-gccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 || |||||| ||||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 703 ggcgaagtcggccgc-ggcgacggcggggccgaaggagcgggcggggttcatgg 651
>gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA, complete cds Length = 1110 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 357 |||||||| ||| |||||||| ||||||| |||||||||| ||||||||| |||| | Sbjct: 920 gtagacgaggccagcgaggccgccgccgacgagcgggccgacccagtagacccagtttcc 861 Query: 358 ggtgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 || ||||||||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 860 ggcgaagtcgcccgcggcgacggcggggccgaaggagcgggcggggttcatgg 808
>gb|AY105015.1| Zea mays PCO137646 mRNA sequence Length = 1238 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 357 |||||||| ||| |||||||| ||||||| |||||||||| ||||||||| |||| | Sbjct: 919 gtagacgaggccagcgaggccgccgccgacgagcgggccgacccagtagacccagtttcc 860 Query: 358 ggtgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 || ||||||||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 859 ggcgaagtcgcccgcggcgacggcggggccgaaggagcgggcggggttcatgg 807
>ref|XM_467137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 747 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 367 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 683 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 624 Query: 368 ccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 623 ccggcggcgacggcggggccgaaggagcgcgctgggttcatgg 581
>emb|AJ005078.2|PAAJ5078 Picea abies mRNA for aquaporin-like protein Length = 1007 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 296 cggtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatg 355 ||||||||||| ||||| ||||| || |||||||| |||||| ||||||| | |||| || Sbjct: 775 cggtagacgataccggcaaggccgcctccgatgagggggccgacccagtacacccagttg 716 Query: 356 ttggtgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 | ||||||||| ||||| |||| || ||| |||| ||||| || |||||||||| Sbjct: 715 tcggtgaagtctccgctcacaacagcagggtcgaaggagcgggcggggttcatgg 661
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 367 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 26627183 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 26627242 Query: 368 ccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 26627243 ccggcggcgacggcggggccgaaggagcgcgctgggttcatgg 26627285
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 367 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 169564 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 169623 Query: 368 ccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 169624 ccggcggcgacggcggggccgaaggagcgcgctgggttcatgg 169666
>dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_F09 Length = 139371 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 367 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 61344 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 61403 Query: 368 ccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 61404 ccggcggcgacggcggggccgaaggagcgcgctgggttcatgg 61446
>dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mRNA for tonoplast intrinsic protein, complete cds Length = 1013 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 367 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 756 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 697 Query: 368 ccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 696 ccggcggcgacggcggggccgaaggagcgcgctgggttcatgg 654
>dbj|AK064728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A10, full insert sequence Length = 873 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 367 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 558 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 499 Query: 368 ccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 498 ccggcggcgacggcggggccgaaggagcgcgctgggttcatgg 456
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Minus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcg 367 ||||||||||| |||||||| ||||||||| ||||||||| |||| || | ||||| | Sbjct: 250651 ccggcgaggccgccgccgatcagcgggccgacccagtagacccagttgccagcgaagttg 250592 Query: 368 ccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 ||| ||| |||||||||||||| ||||| || |||||||||| Sbjct: 250591 ccggcggcgacggcggggccgaaggagcgcgctgggttcatgg 250549
>emb|AJ289866.2|VVI289866 Vitis vinifera mRNA for putative aquaporin (delta-TIP gene) Length = 1017 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 339 cccagtagatccagatgttggtgaagtcgccgctggcaacggcggggccgaatgagcgtg 398 |||||||||||||| ||| |||||||||||||| | |||||||||||||| ||||| | Sbjct: 655 cccagtagatccagttgtccttgaagtcgccgctgacgacggcggggccgaaggagcggg 596 Query: 399 cagggttcat 408 | |||||||| Sbjct: 595 cggggttcat 586
>gb|AF271661.1|AF271661 Vitis berlandieri x Vitis rupestris putative aquaporin TIP1 (TIP1) mRNA, complete cds Length = 1057 Score = 67.9 bits (34), Expect = 2e-08 Identities = 61/70 (87%) Strand = Plus / Minus Query: 339 cccagtagatccagatgttggtgaagtcgccgctggcaacggcggggccgaatgagcgtg 398 |||||||||||||| ||| |||||||||||||| | |||||||||||||| ||||| | Sbjct: 697 cccagtagatccagttgtccttgaagtcgccgctgacgacggcggggccgaaggagcggg 638 Query: 399 cagggttcat 408 | |||||||| Sbjct: 637 cggggttcat 628
>ref|XM_473424.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2307 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 357 |||||||| ||||| |||||||| ||||| || |||||| ||||||| | |||| || Sbjct: 696 gtagacgagcccggccaggccaccaccgatcagtgggccgacccagtacacccagttgcc 637 Query: 358 ggtgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 || ||||| |||| || ||||| |||||||| ||||| ||||||||||||| Sbjct: 636 ggcgaagttgccggccgcgacggccgggccgaaggagcgggcagggttcatgg 584
>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17, complete sequence Length = 127259 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 357 |||||||| ||||| |||||||| ||||| || |||||| ||||||| | |||| || Sbjct: 92483 gtagacgagcccggccaggccaccaccgatcagtgggccgacccagtacacccagttgcc 92542 Query: 358 ggtgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 || ||||| |||| || ||||| |||||||| ||||| ||||||||||||| Sbjct: 92543 ggcgaagttgccggccgcgacggccgggccgaaggagcgggcagggttcatgg 92595
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 58.0 bits (29), Expect = 2e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccagatgtt 357 |||||||| ||||| |||||||| ||||| || |||||| ||||||| | |||| || Sbjct: 27568507 gtagacgagcccggccaggccaccaccgatcagtgggccgacccagtacacccagttgcc 27568566 Query: 358 ggtgaagtcgccgctggcaacggcggggccgaatgagcgtgcagggttcatgg 410 || ||||| |||| || ||||| |||||||| ||||| ||||||||||||| Sbjct: 27568567 ggcgaagttgccggccgcgacggccgggccgaaggagcgggcagggttcatgg 27568619 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 agatgttggtgaagtcgccgctg 373 ||||||||||||||||||||||| Sbjct: 25620210 agatgttggtgaagtcgccgctg 25620232
>gb|AY106931.1| Zea mays PCO140073 mRNA sequence Length = 1069 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 314 aggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctg 373 ||||||||||||| ||| |||||| ||||||| | |||| || || ||||| |||| Sbjct: 757 aggccaccgccgacgagggggccgacccagtacacccagttgccggcgaagttgccggcc 698 Query: 374 gcaacggcggggccgaatgagcgtgcagggttcatgg 410 || |||||||||||||| ||||| || |||||||||| Sbjct: 697 gccacggcggggccgaaggagcgggccgggttcatgg 661
>gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds Length = 1060 Score = 58.0 bits (29), Expect = 2e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 314 aggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctg 373 ||||||||||||| ||| |||||| ||||||| | |||| || || ||||| |||| Sbjct: 739 aggccaccgccgacgagggggccgacccagtacacccagttgccggcgaagttgccggcc 680 Query: 374 gcaacggcggggccgaatgagcgtgcagggttcatgg 410 || |||||||||||||| ||||| || |||||||||| Sbjct: 679 gccacggcggggccgaaggagcgggccgggttcatgg 643
>ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 699 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 652
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 2544783 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 2544830 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 351 agatgttggtgaagtcgccgctg 373 ||||||||||||||||||||||| Sbjct: 15990586 agatgttggtgaagtcgccgctg 15990564
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 762 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 715
>gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0067N01, from chromosome 3, complete sequence Length = 159636 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 125311 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 125264
>gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds Length = 1039 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 700 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 653
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 2544893 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 2544940 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 351 agatgttggtgaagtcgccgctg 373 ||||||||||||||||||||||| Sbjct: 15985120 agatgttggtgaagtcgccgctg 15985098
>dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds Length = 1080 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 777 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 730
>dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full insert sequence Length = 1034 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 786 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 739
>dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full insert sequence Length = 1082 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 788 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 741
>dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full insert sequence Length = 551 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 312 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 265
>dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full insert sequence Length = 1055 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||||||||||||||| ||||| ||||||| Sbjct: 784 gtagatgacgccggcgaggccaccgccgatgagtgggccaacccagta 737
>gb|AY104464.1| Zea mays PCO114899 mRNA sequence Length = 1167 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 795 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 748
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 56.0 bits (28), Expect = 9e-05 Identities = 43/48 (89%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||| ||||||||||| |||||| ||||||| Sbjct: 793 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 746
>gb|L12257.1|SOYNODA Glycine max nodulin-26 mRNA, complete cds Length = 1047 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 ||||| |||||||| ||||||||||||||||||||| Sbjct: 788 ccacctccgatgagagggccggcccagtagatccag 753
>gb|AF290618.1|AF290618 Nicotiana glauca putative delta TIP (MIP2) mRNA, complete cds Length = 1072 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 335 ccggcccagtagatccagatgttggtgaagtcgccgctggc 375 ||||||||||| |||||| |||| ||||||||||| ||||| Sbjct: 719 ccggcccagtaaatccagttgttagtgaagtcgccactggc 679
>gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds Length = 968 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Minus Query: 314 aggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctg 373 ||||||||||||| ||| |||||| ||||||| | |||| || || ||||| ||| Sbjct: 680 aggccaccgccgacgagggggccgacccagtacacccagttgccggcgaagttaccggcc 621 Query: 374 gcaacggcggggccgaatgagcgtgcagggttcatgg 410 || |||||||||||||| ||||| || |||||||||| Sbjct: 620 gccacggcggggccgaaggagcgggccgggttcatgg 584
>gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA, complete cds Length = 1042 Score = 50.1 bits (25), Expect = 0.006 Identities = 79/97 (81%) Strand = Plus / Minus Query: 314 aggccaccgccgatgagcgggccggcccagtagatccagatgttggtgaagtcgccgctg 373 ||||||||||||| ||| |||||| ||||||| | |||| || || ||||| ||| Sbjct: 748 aggccaccgccgacgagggggccgacccagtacacccagttgccggcgaagttaccggcc 689 Query: 374 gcaacggcggggccgaatgagcgtgcagggttcatgg 410 || |||||||||||||| ||||| || |||||||||| Sbjct: 688 gccacggcggggccgaaggagcgggccgggttcatgg 652
>gb|BT016300.1| Zea mays clone Contig133 mRNA sequence Length = 1112 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||| ||||||||||| || ||| ||||||| Sbjct: 796 gtagatgacgccggcgaggccgccgccgatgaggggcccgacccagta 749
>emb|AJ243309.1|PSA243309 Pisum sativum mRNA for putative tonoplast intrinsic protein (gene tip1-1) Length = 1104 Score = 48.1 bits (24), Expect = 0.023 Identities = 33/36 (91%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 ||||| ||||| || ||||||||||||||||||||| Sbjct: 755 ccaccaccgataagtgggccggcccagtagatccag 720
>gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds Length = 1097 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatgagcgggccggcccagta 345 ||||| || |||||||||||| ||||||||||| || ||| ||||||| Sbjct: 792 gtagatgacgccggcgaggccgccgccgatgaggggcccgacccagta 745
>ref|XM_470886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1812 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 351 agatgttggtgaagtcgccgctg 373 ||||||||||||||||||||||| Sbjct: 877 agatgttggtgaagtcgccgctg 855
>gb|AC091787.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0087G11, complete sequence Length = 169728 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 agatgttggtgaagtcgccgctg 373 ||||||||||||||||||||||| Sbjct: 59831 agatgttggtgaagtcgccgctg 59853
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 agatgttggtgaagtcgccgctg 373 ||||||||||||||||||||||| Sbjct: 106408 agatgttggtgaagtcgccgctg 106430
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 307 gccggcgaggccaccgccgatga 329 ||||||||||||||||||||||| Sbjct: 505313 gccggcgaggccaccgccgatga 505291 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gccggcgaggccaccgccga 326 |||||||||||||||||||| Sbjct: 1274146 gccggcgaggccaccgccga 1274165
>dbj|AK107457.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-C11, full insert sequence Length = 1679 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 351 agatgttggtgaagtcgccgctg 373 ||||||||||||||||||||||| Sbjct: 794 agatgttggtgaagtcgccgctg 816
>dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full insert sequence Length = 870 Score = 46.1 bits (23), Expect = 0.089 Identities = 29/31 (93%) Strand = Plus / Minus Query: 298 gtagacgatgccggcgaggccaccgccgatg 328 ||||| || |||||||||||||||||||||| Sbjct: 622 gtagatgacgccggcgaggccaccgccgatg 592
>gb|DQ226889.1| Boechera divaricarpa isolate SLW-D-E07 mRNA sequence Length = 980 Score = 42.1 bits (21), Expect = 1.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 308 ccggcgaggccaccgccgatgagcgggccggcccagtagatccag 352 ||||||| |||||||||| ||| || ||||||||||||| |||| Sbjct: 705 ccggcgattccaccgccgacgagaggtccggcccagtagacccag 661
>emb|BX470264.22| Zebrafish DNA sequence from clone CH211-252F13 in linkage group 7, complete sequence Length = 168673 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 ttcacaacatcacattatatt 67 ||||||||||||||||||||| Sbjct: 78807 ttcacaacatcacattatatt 78827
>emb|Z29946.1|TRGTIPLP T.repens (Huia) mRNA for gamma-Tip-like protein Length = 991 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 gggccggcccagtagatccag 352 ||||||||||||||||||||| Sbjct: 655 gggccggcccagtagatccag 635
>ref|NM_129238.2| Arabidopsis thaliana GAMMA-TIP; water channel AT2G36830 (GAMMA-TIP) mRNA, complete cds Length = 1058 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 747 ccaccgccgacgagaggtccggcccagtagacccag 712
>gb|AC165149.5| Mus musculus BAC clone RP24-114C10 from chromosome 13, complete sequence Length = 191162 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ggaaactcaactgaagaatt 30 |||||||||||||||||||| Sbjct: 13923 ggaaactcaactgaagaatt 13942
>ref|NM_020416.2| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform (PPP2R2C), transcript variant 1, mRNA Length = 4117 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 3856 aaaccccaacaacttcacaa 3837
>ref|NM_181876.1| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform (PPP2R2C), transcript variant 2, mRNA Length = 4087 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 3826 aaaccccaacaacttcacaa 3807
>gb|AC121551.11| Mus musculus chromosome 1, clone RP24-144H23, complete sequence Length = 168683 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ggaaactcaactgaagaatt 30 |||||||||||||||||||| Sbjct: 136133 ggaaactcaactgaagaatt 136114
>gb|AC006012.2| Homo sapiens PAC clone RP5-942I16 from 7, complete sequence Length = 121598 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 ggcatcatggaaaccaaaca 218 |||||||||||||||||||| Sbjct: 113843 ggcatcatggaaaccaaaca 113824
>ref|XM_856403.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 2 (LOC607978), mRNA Length = 1082 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 379 ggcggggccgaatgagcgtgcagggttcatgg 410 |||||||||||| ||||| || |||||||||| Sbjct: 588 ggcggggccgaaggagcgggccgggttcatgg 557
>ref|XM_845359.1| PREDICTED: Canis familiaris similar to aquaporin 6, transcript variant 1 (LOC607978), mRNA Length = 1067 Score = 40.1 bits (20), Expect = 5.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 379 ggcggggccgaatgagcgtgcagggttcatgg 410 |||||||||||| ||||| || |||||||||| Sbjct: 573 ggcggggccgaaggagcgggccgggttcatgg 542
>gb|AC117212.5| Mus musculus BAC clone RP23-302A24 from chromosome 6, complete sequence Length = 212735 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 57462 aaaccccaacaacttcacaa 57481
>emb|X63552.1|ATGTIPARA A.thaliana gene for tonoplast intrinsic protein gamma-TIP(Ara) Length = 1398 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 1132 ccaccgccgacgagaggtccggcccagtagacccag 1097
>gb|AY059134.1| Arabidopsis thaliana putative aquaporin (At2g36830) mRNA, complete cds Length = 787 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 683 ccaccgccgacgagaggtccggcccagtagacccag 648
>gb|AF370172.1| Arabidopsis thaliana putative tonoplast intrinsic protein gamma, aquaporin (At2g36830) mRNA, complete cds Length = 1030 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 741 ccaccgccgacgagaggtccggcccagtagacccag 706
>emb|X54854.1|ATROOTSP A. thaliana mRNA for root-specific gene Length = 993 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 725 ccaccgccgacgagaggtccggcccagtagacccag 690
>gb|BC021735.2| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform, mRNA (cDNA clone IMAGE:4816112) Length = 1172 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 918 aaaccccaacaacttcacaa 899
>gb|BC045682.1| Homo sapiens protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), gamma isoform, mRNA (cDNA clone IMAGE:5300526) Length = 2161 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 1900 aaaccccaacaacttcacaa 1881
>emb|AJ314583.1|POC314583 Posidonia oceanica mRNA for putative tonoplast intrinsic protein (tip1 gene) Length = 1112 Score = 40.1 bits (20), Expect = 5.5 Identities = 47/56 (83%) Strand = Plus / Minus Query: 297 ggtagacgatgccggcgaggccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||||||||||| | | | |||| || |||||| |||||||||||||| Sbjct: 779 ggtagacgatgccggcgatggctgcaccgactagtgggccgacccagtagatccag 724
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 gccggcgaggccaccgccga 326 |||||||||||||||||||| Sbjct: 4535021 gccggcgaggccaccgccga 4535040
>dbj|AK127386.1| Homo sapiens cDNA FLJ45468 fis, clone BRSTN2015788 Length = 1737 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 1499 aaaccccaacaacttcacaa 1480
>gb|AC068733.12| Homo sapiens chromosome 11, clone RP11-304C12, complete sequence Length = 191656 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 tctcaaaccccaacaacttcacaa 53 ||||||||||||||| |||||||| Sbjct: 107696 tctcaaaccccaacaccttcacaa 107719
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete sequence Length = 134151 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 7442 ccaccgccgacgagaggtccggcccagtagacccag 7407
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 cggcgaggccaccgccgatg 328 |||||||||||||||||||| Sbjct: 1656225 cggcgaggccaccgccgatg 1656206
>gb|U62778.1|GHU62778 Gossypium hirsutum delta-tonoplast intrinsic protein mRNA, complete cds Length = 997 Score = 40.1 bits (20), Expect = 5.5 Identities = 59/72 (81%) Strand = Plus / Minus Query: 339 cccagtagatccagatgttggtgaagtcgccgctggcaacggcggggccgaatgagcgtg 398 ||||||||||||| ||| | |||||||||| || || || || || ||||| ||||| | Sbjct: 692 cccagtagatccatatgccgttgaagtcgccactagccactgctggtccgaaggagcgag 633 Query: 399 cagggttcatgg 410 | |||||||||| Sbjct: 632 ctgggttcatgg 621
>emb|BX819301.1|CNS0AA93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZE04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 996 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 722 ccaccgccgacgagaggtccggcccagtagacccag 687
>emb|BX819066.1|CNS0AA99 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB42ZA01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1009 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 712 ccaccgccgacgagaggtccggcccagtagacccag 677
>emb|BX818765.1|CNS0AA8G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZD11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 950 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 727 ccaccgccgacgagaggtccggcccagtagacccag 692
>emb|BX819619.1|CNS0A8TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB95ZA10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 728 ccaccgccgacgagaggtccggcccagtagacccag 693
>emb|BX819585.1|CNS0A8ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB91ZD10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 728 ccaccgccgacgagaggtccggcccagtagacccag 693
>emb|BX819242.1|CNS0A8YI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB5ZD01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 904 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 726 ccaccgccgacgagaggtccggcccagtagacccag 691
>emb|BX818836.1|CNS0A8V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZB03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 995 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 727 ccaccgccgacgagaggtccggcccagtagacccag 692
>emb|BX818785.1|CNS0A8WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB13ZC03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 973 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 726 ccaccgccgacgagaggtccggcccagtagacccag 691
>emb|BX820166.1|CNS0A8IR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS84ZH08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 961 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 718 ccaccgccgacgagaggtccggcccagtagacccag 683
>dbj|AB206106.1| Mimosa pudica tip2;1 mRNA for tonoplast intrinsic protein 2;1, complete cds Length = 1001 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 339 cccagtagatccagatgttggtgaagtc 366 |||||||||||||| |||||||||||| Sbjct: 707 cccagtagatccagtagttggtgaagtc 680
>gb|AC084327.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-367K14, complete sequence Length = 108667 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 32732 aaaccccaacaacttcacaa 32713
>gb|AC116317.4| Homo sapiens BAC clone RP11-1406H17 from 4, complete sequence Length = 160943 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 aaaccccaacaacttcacaa 53 |||||||||||||||||||| Sbjct: 82311 aaaccccaacaacttcacaa 82330
>gb|AY087558.1| Arabidopsis thaliana clone 36633 mRNA, complete sequence Length = 1042 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 747 ccaccgccgacgagaggtccggcccagtagacccag 712
>gb|AF497482.1| Micromonospora echinospora calicheamicin biosynthetic locus, complete sequence Length = 90348 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ccgccgatgagcgggccggc 339 |||||||||||||||||||| Sbjct: 7090 ccgccgatgagcgggccggc 7109
>dbj|AB126924.1| Prunus persica Pr-gTIP1 mRNA for tonoplast intrinsic protein, complete cds Length = 1143 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 ||||||||||| | || |||||||||||||||||| Sbjct: 783 ccaccgccgatcaaaggcccggcccagtagatccag 748
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 caccgccgatgagcgggccg 337 |||||||||||||||||||| Sbjct: 557849 caccgccgatgagcgggccg 557868
>gb|M84344.1|ATHGTIP Arabidopsis thaliana tonoplast intrinsic protein (gamma-TIP) gene, complete cds Length = 1398 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 317 ccaccgccgatgagcgggccggcccagtagatccag 352 |||||||||| ||| || ||||||||||||| |||| Sbjct: 1132 ccaccgccgacgagaggtccggcccagtagacccag 1097 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,248,064 Number of Sequences: 3902068 Number of extensions: 3248064 Number of successful extensions: 62165 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 61655 Number of HSP's gapped (non-prelim): 498 length of query: 410 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 388 effective length of database: 17,147,199,772 effective search space: 6653113511536 effective search space used: 6653113511536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)