ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DMD_CANFA (O97592) Dystrophin 30 1.4

>DMD_CANFA (O97592) Dystrophin|
          Length = 3680

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +3

Query: 48   ILLHHYWRCRDAEPPLSQP 104
            +L+ HYWR  + E PLSQP
Sbjct: 3465 LLIQHYWRSLNQESPLSQP 3483


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,555,244
Number of Sequences: 219361
Number of extensions: 188676
Number of successful extensions: 586
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 80,573,946
effective HSP length: 18
effective length of database: 76,625,448
effective search space used: 1839010752
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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