ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart60a10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 249 atcatggcttggcctctggctcctgaaagtggaattcaggctt 291 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 463 atcatggcttggcctccggctccgggaagtggaactcaggctt 421
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 249 atcatggcttggcctctggctcctgaaagtggaattcaggctt 291 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 24427895 atcatggcttggcctccggctccgggaagtggaactcaggctt 24427937 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 250 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggca 299 ||||||||||||||| |||||| | |||||||| || |||||||| |||| Sbjct: 24424060 tcatggcttggcctccggctccgggaagtggaactcgggcttcggcggca 24424109 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 247 cgatcatggcttggcctctggctc 270 |||||||||||||||||||||||| Sbjct: 24434446 cgatcatggcttggcctctggctc 24434469
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_B10 Length = 100294 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 249 atcatggcttggcctctggctcctgaaagtggaattcaggctt 291 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 53762 atcatggcttggcctccggctccgggaagtggaactcaggctt 53804 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 250 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggca 299 ||||||||||||||| |||||| | |||||||| || |||||||| |||| Sbjct: 49927 tcatggcttggcctccggctccgggaagtggaactcgggcttcggcggca 49976 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Plus Query: 247 cgatcatggcttggcctctggctc 270 |||||||||||||||||||||||| Sbjct: 60313 cgatcatggcttggcctctggctc 60336
>dbj|AK062673.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-G06, full insert sequence Length = 678 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 249 atcatggcttggcctctggctcctgaaagtggaattcaggctt 291 |||||||||||||||| |||||| | |||||||| |||||||| Sbjct: 463 atcatggcttggcctccggctccgggaagtggaactcaggctt 421
>ref|XM_479034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 776 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 250 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggca 299 ||||||||||||||| |||||| | |||||||| || |||||||| |||| Sbjct: 516 tcatggcttggcctccggctccgggaagtggaactcgggcttcggcggca 467
>dbj|AK065663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040D08, full insert sequence Length = 776 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Minus Query: 250 tcatggcttggcctctggctcctgaaagtggaattcaggcttcgggggca 299 ||||||||||||||| |||||| | |||||||| || |||||||| |||| Sbjct: 516 tcatggcttggcctccggctccgggaagtggaactctggcttcggcggca 467
>ref|XM_506449.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1634_B10.120 mRNA Length = 629 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 247 cgatcatggcttggcctctggctc 270 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>ref|XM_479039.1| Oryza sativa (japonica cultivar-group), mRNA Length = 629 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 247 cgatcatggcttggcctctggctc 270 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>dbj|AK105814.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C08, full insert sequence Length = 629 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 247 cgatcatggcttggcctctggctc 270 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>dbj|AK062681.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-H05, full insert sequence Length = 629 Score = 48.1 bits (24), Expect = 0.016 Identities = 24/24 (100%) Strand = Plus / Minus Query: 247 cgatcatggcttggcctctggctc 270 |||||||||||||||||||||||| Sbjct: 424 cgatcatggcttggcctctggctc 401
>gb|AC132322.3| Mus musculus BAC clone RP24-262F3 from chromosome 13, complete sequence Length = 155179 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacacatg 180 |||||||||||||||||||||| Sbjct: 135571 acatgcacaacacacacacatg 135592
>emb|AL031772.6|HS225E12 Human DNA sequence from clone RP1-225E12 on chromosome 6q24 Contains the gene for hHDC for homolog of Drosophila headcase (LOC51696) and part of a novel gene, complete sequence Length = 126464 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 157 gaacatgcacaacacacacaca 178 |||||||||||||||||||||| Sbjct: 47170 gaacatgcacaacacacacaca 47149
>emb|BX883051.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 10/11 Length = 348946 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacacatg 180 |||||||||||||||||||||| Sbjct: 262162 acatgcacaacacacacacatg 262141
>gb|AC016178.9| Homo sapiens chromosome 8, clone RP11-259L23, complete sequence Length = 171035 Score = 44.1 bits (22), Expect = 0.25 Identities = 25/26 (96%) Strand = Plus / Plus Query: 258 tggcctctggctcctgaaagtggaat 283 ||||||||||||||| |||||||||| Sbjct: 58324 tggcctctggctcctaaaagtggaat 58349
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 acgtaaagggaagtagggaaca 69 |||||||||||||||||||||| Sbjct: 18312897 acgtaaagggaagtagggaaca 18312876
>gb|AC154626.2| Mus musculus BAC clone RP23-311B8 from chromosome 14, complete sequence Length = 194638 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacacatg 180 |||||||||||||||||||||| Sbjct: 157404 acatgcacaacacacacacatg 157383
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 44.1 bits (22), Expect = 0.25 Identities = 22/22 (100%) Strand = Plus / Minus Query: 48 acgtaaagggaagtagggaaca 69 |||||||||||||||||||||| Sbjct: 27633 acgtaaagggaagtagggaaca 27612
>gb|AC166238.7| Mus musculus chromosome 1, clone RP23-469H11, complete sequence Length = 181980 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacaca 178 ||||||||||||||||||||| Sbjct: 164437 aacatgcacaacacacacaca 164457
>gb|AC097832.7| Rattus norvegicus 11 BAC CH230-68C19 (Children's Hospital Oakland Research Institute) complete sequence Length = 262323 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 111858 acatgcacaacacacacacat 111878 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 37152 acatgcacaacacacacaca 37133
>gb|AC122922.4| Mus musculus BAC clone RP23-34M5 from chromosome 1, complete sequence Length = 223959 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacaca 178 ||||||||||||||||||||| Sbjct: 13212 aacatgcacaacacacacaca 13232
>gb|AC138401.9| Mus musculus chromosome 13, clone RP24-79G5, complete sequence Length = 209942 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 aacatgcacaacacacacaca 178 ||||||||||||||||||||| Sbjct: 39990 aacatgcacaacacacacaca 39970
>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence Length = 202938 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 143016 acatgcacaacacacacacat 142996
>gb|AC092508.3| Mus musculus strain C57BL6/J chromosome 5 clone RP23-133C19, complete sequence Length = 188694 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 ggatatttattcatgtatata 26 ||||||||||||||||||||| Sbjct: 49982 ggatatttattcatgtatata 50002
>gb|AC069208.24| Homo sapiens 12 BAC RP11-778H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167182 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 ctcctgaaagtggaattcagg 288 ||||||||||||||||||||| Sbjct: 75771 ctcctgaaagtggaattcagg 75751
>gb|AC126439.3| Mus musculus BAC clone RP24-290I17 from chromosome 14, complete sequence Length = 163978 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 129518 acatgcacaacacacacacat 129538
>gb|AC006151.4| Homo sapiens BAC clone GS1-286B23 from 7, complete sequence Length = 136006 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 161 atgcacaacacacacacatgt 181 ||||||||||||||||||||| Sbjct: 1891 atgcacaacacacacacatgt 1871
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence Length = 141653 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 27452 acatgcacaacacacacacat 27432
>gb|AY861316.1| Cottus gobio microsatellite LCE76 sequence Length = 600 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 158 aacatgcacaacacacacaca 178 ||||||||||||||||||||| Sbjct: 67 aacatgcacaacacacacaca 47
>emb|AL449263.6| Human DNA sequence from clone RP3-353C17 on chromosome 20, complete sequence Length = 31445 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 4345 acatgcacaacacacacacat 4325
>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the WNT9A gene for wingless-type MMTV integration site family, member 9A and a CpG island, complete sequence Length = 141703 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 63400 acatgcacaacacacacacat 63420
>emb|AL389889.11| Human DNA sequence from clone RP11-164D18 on chromosome 20 Contains part of a novel gene similar to KIAA0233, complete sequence Length = 138347 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 gatatttattcatgtatatat 27 ||||||||||||||||||||| Sbjct: 66661 gatatttattcatgtatatat 66641
>emb|AL645982.26| Mouse DNA sequence from clone DN-452A22 on chromosome 3 Contains the 5' end of the Fgf2 gene for fibroblast growth factor 2, a novel gene (A930011G24RIK), a mitochondrial ribosomal protein S33 (Mrps33) pseudogene, a novel gene (gene model 1805 (NCBI) (Gm1805)), the Cetn4 gene for centrin 4, a novel gene, the 5' end of the Il21 gene for interleukin 21 and a CpG island, complete sequence Length = 133023 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 aacgaacatgcacaacacacacaca 178 |||||| |||||||||||||||||| Sbjct: 125554 aacgaatatgcacaacacacacaca 125578
>gb|AC155655.8| Mus musculus 6 BAC RP24-66L18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203618 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 15493 acatgcacaacacacacacat 15473
>gb|AC153377.5| Mus musculus 6 BAC RP23-380O16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 195618 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 155952 acatgcacaacacacacacat 155932
>emb|AL953869.12| Zebrafish DNA sequence from clone CH211-261J13 in linkage group 7, complete sequence Length = 171417 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacaca 178 ||||||||||||||||||||| Sbjct: 107631 aacatgcacaacacacacaca 107651
>gb|AC008056.6|AC008056 Homo sapiens chromosome 14 clone RP11-242P2 containing gene for neurexin III gene, partial cds, complete sequence Length = 163584 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacacat 179 ||||||||||||||||||||| Sbjct: 8433 acatgcacaacacacacacat 8453
>emb|BX511097.21| Zebrafish DNA sequence from clone DKEYP-93C5 in linkage group 2, complete sequence Length = 134883 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacaca 178 ||||||||||||||||||||| Sbjct: 87842 aacatgcacaacacacacaca 87862
>emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chromosome 2, complete sequence Length = 115361 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 9 tatttattcatgtatatatcacata 33 ||||||| ||||||||||||||||| Sbjct: 39461 tatttatacatgtatatatcacata 39437
>emb|AL953842.8| Zebrafish DNA sequence from clone DKEY-33I11, complete sequence Length = 225654 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 actctaacaatcatacacacatgta 215 ||||| ||||||||||||||||||| Sbjct: 56148 actctcacaatcatacacacatgta 56124
>gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, complete sequence Length = 205819 Score = 42.1 bits (21), Expect = 1.00 Identities = 21/21 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacaca 178 ||||||||||||||||||||| Sbjct: 64951 aacatgcacaacacacacaca 64971
>emb|AL662862.16| Mouse DNA sequence from clone CT7-139P23 on chromosome 3, complete sequence Length = 120808 Score = 42.1 bits (21), Expect = 1.00 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 aacgaacatgcacaacacacacaca 178 |||||| |||||||||||||||||| Sbjct: 44558 aacgaatatgcacaacacacacaca 44582
>gb|AC161810.10| Mus musculus chromosome 3, clone RP24-363L5, complete sequence Length = 151433 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 42709 acatgcacaacacacacaca 42728
>gb|AC155249.2| Mus musculus BAC clone RP24-254A5 from chromosome 9, complete sequence Length = 191932 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 152161 acatgcacaacacacacaca 152180
>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence Length = 245125 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 76376 acatgcacaacacacacaca 76357
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 142533 acatgcacaacacacacaca 142514
>gb|AC168216.2| Mus musculus chromosome 1, clone wi1-680L13, complete sequence Length = 39977 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 36855 acatgcacaacacacacaca 36874
>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 123775 acatgcacaacacacacaca 123794 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 123348 acatgcacaacacacacaca 123329
>gb|AC107684.7| Mus musculus chromosome 5, clone RP24-389O5, complete sequence Length = 121239 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 14720 acatgcacaacacacacaca 14701
>gb|AC147887.2| Xenopus tropicalis clone CH216-147L5, complete sequence Length = 176251 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 98729 acatgcacaacacacacaca 98710
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 9698 acatgcacaacacacacaca 9679
>gb|AC115858.14| Mus musculus chromosome 7, clone RP24-285C16, complete sequence Length = 175843 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 acacacacacatgtctagta 187 |||||||||||||||||||| Sbjct: 70603 acacacacacatgtctagta 70622
>gb|AC140182.2| Mus musculus BAC clone RP24-349I16 from chromosome 8, complete sequence Length = 151221 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 126031 acatgcacaacacacacaca 126050
>gb|AC134898.4| Mus musculus BAC clone RP23-478H2 from chromosome 14, complete sequence Length = 213348 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ttcatgtatatatcacatac 34 |||||||||||||||||||| Sbjct: 145550 ttcatgtatatatcacatac 145531
>gb|AC122283.3| Mus musculus BAC clone RP23-242G6 from chromosome 10, complete sequence Length = 184346 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 133813 acatgcacaacacacacaca 133794
>gb|M75136.1|IH1CG Ictalurid herpesvirus 1 strain Auburn 1, complete genome Length = 134226 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 taacgaacatgcacaacacacaca 176 ||||||||||| |||||||||||| Sbjct: 105616 taacgaacatgtacaacacacaca 105593
>gb|AC118249.11| Mus musculus chromosome 19, clone RP23-397G23, complete sequence Length = 224129 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 151363 acatgcacaacacacacaca 151344
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tagacactcaaacataacac 121 |||||||||||||||||||| Sbjct: 3064863 tagacactcaaacataacac 3064844
>gb|AC005077.5| Homo sapiens BAC clone CTA-228D17 from 7, complete sequence Length = 240379 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacac 177 |||||||||||||||||||| Sbjct: 103548 aacatgcacaacacacacac 103567
>gb|AC134325.2| Mus musculus BAC clone RP24-235L14 from chromosome 5, complete sequence Length = 106345 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 87007 acatgcacaacacacacaca 87026
>emb|CR627484.12| Zebrafish DNA sequence from clone CH211-281M7 in linkage group 16, complete sequence Length = 152450 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacac 177 |||||||||||||||||||| Sbjct: 60296 aacatgcacaacacacacac 60315
>emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromosome 6, complete sequence Length = 187800 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 atggcttggcctctggctcc 271 |||||||||||||||||||| Sbjct: 79120 atggcttggcctctggctcc 79139
>gb|AC125087.2| Mus musculus BAC clone RP24-143E18 from chromosome 14, complete sequence Length = 180794 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 79897 acatgcacaacacacacaca 79916
>gb|AC125147.4| Mus musculus BAC clone RP24-350A15 from chromosome 7, complete sequence Length = 184180 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 29536 acatgcacaacacacacaca 29555
>gb|AC125158.3| Mus musculus BAC clone RP24-391P1 from chromosome 5, complete sequence Length = 160775 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 10075 acatgcacaacacacacaca 10094
>gb|AC124384.4| Mus musculus BAC clone RP24-413G2 from chromosome 12, complete sequence Length = 183707 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 97232 acatgcacaacacacacaca 97213
>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence Length = 188704 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 69227 acatgcacaacacacacaca 69246
>gb|AC124578.4| Mus musculus BAC clone RP23-166C2 from 18, complete sequence Length = 213229 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 atatttattcatgtatatat 27 |||||||||||||||||||| Sbjct: 67802 atatttattcatgtatatat 67783
>gb|AC117809.6| Mus musculus chromosome 19, clone RP24-571N5, complete sequence Length = 216153 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 36134 acatgcacaacacacacaca 36115
>gb|AC090654.38| Mus musculus strain C57BL/6J clone rp23-329p1 map 14, complete sequence Length = 204267 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 54242 acatgcacaacacacacaca 54223
>emb|CR394546.9| Zebrafish DNA sequence from clone CH211-212I14 in linkage group 16, complete sequence Length = 174132 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 catgcacaacacacacacat 179 |||||||||||||||||||| Sbjct: 15028 catgcacaacacacacacat 15047
>gb|AC163161.4| Mus musculus BAC clone RP23-103A23 from chromosome 6, complete sequence Length = 224416 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 153787 acatgcacaacacacacaca 153806
>gb|AC158771.2| Mus musculus chromosome 15, clone RP23-450E19, complete sequence Length = 199600 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 acacacacacatgtctagtatata 191 |||||||||||||| ||||||||| Sbjct: 112562 acacacacacatgtatagtatata 112539
>gb|AC165444.2| Mus musculus BAC clone CH25-441A19 from chromosome 5, complete sequence Length = 98389 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 61032 acatgcacaacacacacaca 61051
>ref|NM_010605.3| Mus musculus potassium inwardly-rectifying channel, subfamily J, member 5 (Kcnj5), mRNA Length = 4497 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 3577 acatgcacaacacacacaca 3558
>gb|AC091520.10| Mus musculus strain 129/SvJ clone mgs1-480e13, complete sequence Length = 105813 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 6057 acatgcacaacacacacaca 6076
>emb|AL157699.13| Human DNA sequence from clone RP13-55H22 on chromosome Xq12-21.1 Contains the PJA1 gene for praja 1, a high-mobility group nucleosome binding domain 1 (HMGN1) pseudogene, the 5' end of a novel gene and a CpG island, complete sequence Length = 119185 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 73931 acatgcacaacacacacaca 73950
>emb|AL139102.13| Human DNA sequence from clone RP3-416F10 on chromosome 6 Contains a ribosomal L23a (RPL23A) pseudogene, complete sequence Length = 98490 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 84177 acatgcacaacacacacaca 84158
>emb|AL008637.1|HS833B7 Human DNA sequence from clone CTA-833B7 on chromosome 22q12.3-13.2 Contains the NCF4 gene for cytosolic neutrophil factor 4 (40kD), the 5' part of the CSF2RB gene for granulocyte-macrophage low-affinity colony stimulating factor 2 receptor beta, ESTs, STSs and GSSs, complete sequence Length = 86574 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 72460 acatgcacaacacacacaca 72441
>emb|CR847825.6| Zebrafish DNA sequence from clone DKEY-98D20 in linkage group 6, complete sequence Length = 113362 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 atatttattcatgtatatat 27 |||||||||||||||||||| Sbjct: 56230 atatttattcatgtatatat 56249
>gb|AC159300.3| Mus musculus BAC clone RP23-242D23 from chromosome 6, complete sequence Length = 200738 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 163962 acatgcacaacacacacaca 163943
>emb|AL731800.11| Mouse DNA sequence from clone RP23-358E7 on chromosome 11 Contains the gene for a novel protein, complete sequence Length = 204888 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 74243 acatgcacaacacacacaca 74224
>gb|AC105009.13| Homo sapiens chromosome 8, clone RP11-188K5, complete sequence Length = 175936 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 aaagggaagtagggaacaga 71 |||||||||||||||||||| Sbjct: 154022 aaagggaagtagggaacaga 154003
>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the Foxf2 gene for forkhead box F2, a novel gene and two CpG islands, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 100224 acatgcacaacacacacaca 100243
>gb|AC162615.2| Mus musculus chromosome 7, clone RP23-94C20, complete sequence Length = 130735 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 113774 acatgcacaacacacacaca 113793
>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence Length = 188409 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 acacacatgtatagtatatg 224 |||||||||||||||||||| Sbjct: 8339 acacacatgtatagtatatg 8320
>gb|AC105235.7| Homo sapiens chromosome 8, clone CTD-2014D20, complete sequence Length = 121660 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 aaagggaagtagggaacaga 71 |||||||||||||||||||| Sbjct: 55752 aaagggaagtagggaacaga 55771
>gb|AC182768.3| Pan troglodytes BAC clone CH251-178I17 from chromosome 7, complete sequence Length = 186886 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 aacatgcacaacacacacac 177 |||||||||||||||||||| Sbjct: 50957 aacatgcacaacacacacac 50938
>gb|AC027419.11| Homo sapiens chromosome 8, clone RP11-654G14, complete sequence Length = 172880 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 22195 acatgcacaacacacacaca 22176
>gb|AC105730.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0011L14, complete sequence Length = 117974 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 tagacactcaaacataacac 121 |||||||||||||||||||| Sbjct: 31398 tagacactcaaacataacac 31417
>gb|AC154913.4| Ornithorhynchus anatinus BAC clone OABb-535A1 from chromosome unknown, complete sequence Length = 199332 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 6555 acatgcacaacacacacaca 6536
>dbj|AK137113.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430084E08 product:unclassifiable, full insert sequence Length = 2702 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 acacacacacatgtctagtatata 191 |||||||||||||| ||||||||| Sbjct: 149 acacacacacatgtatagtatata 172
>gb|AF403131.1| Mus musculus G protein-gated K+ channel subunit 4 GIRK4 (Kcnj5) gene, complete cds Length = 20873 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 19675 acatgcacaacacacacaca 19656
>gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, complete sequence Length = 169770 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 168 acacacacacatgtctagtatata 191 |||||||||||| ||||||||||| Sbjct: 165240 acacacacacatatctagtatata 165217
>dbj|AK137600.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830164E09 product:potassium inwardly-rectifying channel, subfamily J, member 5, full insert sequence Length = 4710 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 3714 acatgcacaacacacacaca 3695
>dbj|AK164058.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430039D23 product:potassium inwardly-rectifying channel, subfamily J, member 5, full insert sequence Length = 4497 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 3577 acatgcacaacacacacaca 3558
>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence Length = 201260 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 acacacatgtatagtatatg 224 |||||||||||||||||||| Sbjct: 107358 acacacatgtatagtatatg 107339
>gb|AC139197.10| Mus musculus chromosome 15, clone RP24-119N11, complete sequence Length = 172693 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 86754 acatgcacaacacacacaca 86773 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 86608 acatgcacaacacacacaca 86627
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 tagacactcaaacataacac 121 |||||||||||||||||||| Sbjct: 3064974 tagacactcaaacataacac 3064955
>gb|AC007147.8|AC007147 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR19N18, complete sequence Length = 196248 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cgaacatgcacaacacacacacat 179 |||||||||| ||||||||||||| Sbjct: 4032 cgaacatgcagaacacacacacat 4009
>gb|AC158124.6| Mus musculus chromosome 7, clone RP24-71O4, complete sequence Length = 156165 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 126345 acatgcacaacacacacaca 126326
>gb|AC007186.9|AC007186 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR03D06, complete sequence Length = 176306 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cgaacatgcacaacacacacacat 179 |||||||||| ||||||||||||| Sbjct: 82721 cgaacatgcagaacacacacacat 82744
>gb|AC034305.6|AC034305 Homo sapiens chromosome 17, clone RP11-609D21, complete sequence Length = 103699 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 acacacacacatgtctagtatata 191 |||||||||||| ||||||||||| Sbjct: 65661 acacacacacatatctagtatata 65684
>gb|AC062033.2| Homo sapiens BAC clone RP11-544E11 from 2, complete sequence Length = 208492 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 atatttattcatgtatatat 27 |||||||||||||||||||| Sbjct: 180875 atatttattcatgtatatat 180894
>gb|AC114783.5| Homo sapiens BAC clone RP11-600N14 from 2, complete sequence Length = 106643 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 16523 acatgcacaacacacacaca 16504
>gb|AC107672.6| Mus musculus chromosome 1, clone RP24-95P4, complete sequence Length = 178519 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 166323 acatgcacaacacacacaca 166304
>gb|AC145375.5| Pan troglodytes BAC clone RP43-57M5 from chromosome 7, complete sequence Length = 217260 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 aacatgcacaacacacacac 177 |||||||||||||||||||| Sbjct: 71882 aacatgcacaacacacacac 71901
>gb|AC090659.19| Mus musculus strain C57BL/6J chromosome 14 clone rp23-473n18, complete sequence Length = 194320 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 169450 acatgcacaacacacacaca 169431
>gb|AE014846.1| Plasmodium falciparum 3D7 chromosome 12, section 3 of 9 of the complete sequence Length = 253132 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 atatttattcatgtatatat 27 |||||||||||||||||||| Sbjct: 214842 atatttattcatgtatatat 214823
>gb|AC092580.3| Homo sapiens BAC clone RP11-16D24 from 2, complete sequence Length = 120492 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 115820 acatgcacaacacacacaca 115839 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 115750 acatgcacaacacacacaca 115769
>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence Length = 226264 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 179276 acatgcacaacacacacaca 179257
>gb|AC097449.3| Homo sapiens BAC clone CTD-2140E23 from 2, complete sequence Length = 104837 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 17328 acatgcacaacacacacaca 17309
>dbj|AB024024.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15C23 Length = 73921 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 tatatactctaacaatcata 205 |||||||||||||||||||| Sbjct: 18515 tatatactctaacaatcata 18534
>gb|AC102844.11| Mus musculus chromosome 3, clone RP24-389H4, complete sequence Length = 199088 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 178470 acatgcacaacacacacaca 178489
>emb|BX247899.17| Zebrafish DNA sequence from clone CH211-229B6 in linkage group 19, complete sequence Length = 150160 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 60787 acatgcacaacacacacaca 60768
>gb|AC153593.4| Mus musculus 6 BAC RP23-131B11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205164 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 33075 acatgcacaacacacacaca 33094 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 33042 acatgcacaacacacacaca 33061
>gb|AC132114.4| Mus musculus BAC clone RP24-112A6 from chromosome 9, complete sequence Length = 192639 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 87422 acatgcacaacacacacaca 87441
>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence Length = 189805 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 100 catagacactcaaacataacactc 123 ||||||||| |||||||||||||| Sbjct: 151639 catagacacacaaacataacactc 151662
>gb|AE003630.2| Drosophila melanogaster chromosome 2L, section 39 of 83 of the complete sequence Length = 289460 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cgaacatgcacaacacacacacat 179 |||||||||| ||||||||||||| Sbjct: 145609 cgaacatgcagaacacacacacat 145632
>emb|AL049833.5|CNS0000D Human chromosome 14 DNA sequence BAC R-907D1 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203266 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 atggcttggcctctggctcc 271 |||||||||||||||||||| Sbjct: 200704 atggcttggcctctggctcc 200685
>emb|AJ298130.1|MMU298130 Mus musculus partial Plapi gene for plasmolipin, exons 2-4 Length = 14551 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 6120 acatgcacaacacacacaca 6101
>dbj|AP001699.1| Homo sapiens genomic DNA, chromosome 21q, section 43/105 Length = 340000 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 catgtatatatcacatacat 36 |||||||||||||||||||| Sbjct: 120140 catgtatatatcacatacat 120121
>gb|AC120156.9| Mus musculus chromosome 18, clone RP24-263P17, complete sequence Length = 153019 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 123979 acatgcacaacacacacaca 123960
>gb|AC102485.25| Mus musculus chromosome 5, clone RP24-469G19, complete sequence Length = 168799 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 8435 acatgcacaacacacacaca 8454
>gb|AC155259.1| Mus musculus BAC clone RP24-70C15 from 9, complete sequence Length = 222729 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 14237 acatgcacaacacacacaca 14256
>gb|AC139330.4| Mus musculus BAC clone RP24-206O6 from 12, complete sequence Length = 176663 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 106993 acatgcacaacacacacaca 106974
>emb|CT025673.8| Mouse DNA sequence from clone RP24-286H7 on chromosome 9, complete sequence Length = 148870 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 atatttattcatgtatatat 27 |||||||||||||||||||| Sbjct: 93260 atatttattcatgtatatat 93241
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence Length = 210916 Score = 40.1 bits (20), Expect = 3.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 16 tcatgtatatatcacatacatcat 39 |||||||||||||| ||||||||| Sbjct: 47428 tcatgtatatatcatatacatcat 47405
>gb|AC138329.4| Mus musculus BAC clone RP23-227L14 from 13, complete sequence Length = 240321 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 catgcacaacacacacacat 179 |||||||||||||||||||| Sbjct: 64674 catgcacaacacacacacat 64655
>gb|AC132443.3| Mus musculus BAC clone RP23-157C23 from 6, complete sequence Length = 179231 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 31687 acatgcacaacacacacaca 31668 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 31654 acatgcacaacacacacaca 31635
>gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complete sequence Length = 205543 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 16671 acatgcacaacacacacaca 16652
>gb|AC140409.3| Mus musculus BAC clone RP23-138K22 from 9, complete sequence Length = 200157 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 168048 acatgcacaacacacacaca 168029
>gb|AC161599.3| Mus musculus BAC clone RP23-346B16 from chromosome 9, complete sequence Length = 198471 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 141268 acatgcacaacacacacaca 141249 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 141153 acatgcacaacacacacaca 141134
>gb|AC163437.16| Mus musculus chromosome 5, clone RP23-119I18, complete sequence Length = 190996 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 188581 acatgcacaacacacacaca 188562
>gb|AC163446.2| Mus musculus chromosome 5, clone RP23-151G22, complete sequence Length = 190466 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 7443 acatgcacaacacacacaca 7424
>emb|AL928861.5| Mouse DNA sequence from clone RP24-153B19 on chromosome 2, complete sequence Length = 98816 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 87254 acatgcacaacacacacaca 87273
>emb|AL158800.6|CNS01RGM Human chromosome 14 DNA sequence BAC R-359N5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163979 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 atggcttggcctctggctcc 271 |||||||||||||||||||| Sbjct: 155682 atggcttggcctctggctcc 155701
>emb|AL808131.9| Mouse DNA sequence from clone RP23-367H7 on chromosome X, complete sequence Length = 210322 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tctaacaatcatacacacat 212 |||||||||||||||||||| Sbjct: 187078 tctaacaatcatacacacat 187097
>gb|AC141646.4| Mus musculus BAC clone RP23-84E4 from chromosome 9, complete sequence Length = 193235 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 9408 acatgcacaacacacacaca 9427
>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete sequence Length = 191255 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 157240 acatgcacaacacacacaca 157221
>emb|AL732506.10| Mouse DNA sequence from clone RP23-195K8 on chromosome 4, complete sequence Length = 178592 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 28373 acatgcacaacacacacaca 28354
>dbj|AP002350.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2552C2 Length = 109381 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tatttattcatgtatatatc 28 |||||||||||||||||||| Sbjct: 87193 tatttattcatgtatatatc 87212
>dbj|AP001605.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1987H1, APP-D21S292 region, complete sequence Length = 165942 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 catgtatatatcacatacat 36 |||||||||||||||||||| Sbjct: 22162 catgtatatatcacatacat 22143
>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292 region, complete sequence Length = 186930 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 catgtatatatcacatacat 36 |||||||||||||||||||| Sbjct: 147927 catgtatatatcacatacat 147908
>dbj|AP003787.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1904C11, complete sequence Length = 104429 Score = 40.1 bits (20), Expect = 3.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 acatgcacaacacacacaca 178 |||||||||||||||||||| Sbjct: 20150 acatgcacaacacacacaca 20131 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,800,372 Number of Sequences: 3902068 Number of extensions: 12800372 Number of successful extensions: 107284 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106774 Number of HSP's gapped (non-prelim): 510 length of query: 301 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 279 effective length of database: 17,147,199,772 effective search space: 4784068736388 effective search space used: 4784068736388 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
