Clone Name | rbart60a07 |
---|---|
Clone Library Name | barley_pub |
>emb|BX546451.2| Human DNA sequence from clone WI2-8737H7 on chromosome X, complete sequence Length = 38017 Score = 40.1 bits (20), Expect = 0.62 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaaaccacacttcacaaca 20 |||||||||||||||||||| Sbjct: 33223 aaaaaccacacttcacaaca 33204
>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3, complete sequence Length = 148521 Score = 40.1 bits (20), Expect = 0.62 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 aaaaaccacacttcacaaca 20 |||||||||||||||||||| Sbjct: 86870 aaaaaccacacttcacaaca 86851
>emb|AL513533.15| Human DNA sequence from clone RP11-341B24 on chromosome 10 Contains the 3' end of the LIPA gene for lipase A lysosomal acid cholesterol esterase (Wolman disease), a novel zinc finger pseudogene and the CH25 gene for cholesterol 25-hydroxylase, complete sequence Length = 148151 Score = 38.2 bits (19), Expect = 2.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 aaaaccacacttcacaaca 20 ||||||||||||||||||| Sbjct: 42933 aaaaccacacttcacaaca 42915
>gb|AC102288.11| Mus musculus chromosome 18, clone RP24-346H24, complete sequence Length = 154552 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tcacaacacatccctggg 30 |||||||||||||||||| Sbjct: 134960 tcacaacacatccctggg 134977
>gb|AY494981.1| Triticum turgidum A genome HMW glutenin A gene locus, sequence Length = 307015 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 ttcacaacacatccctgg 29 |||||||||||||||||| Sbjct: 246244 ttcacaacacatccctgg 246261
>emb|AL355601.19| Human DNA sequence from clone RP11-445L6 on chromosome 9 Contains the 5' UTR of the gene for deleted in esophageal cancer 1 (DEC1) and the 5' end of a novel gene, complete sequence Length = 183104 Score = 36.2 bits (18), Expect = 9.7 Identities = 24/26 (92%) Strand = Plus / Minus Query: 5 accacacttcacaacacatccctggg 30 |||||||||||||| | ||||||||| Sbjct: 117489 accacacttcacaaaatatccctggg 117464
>gb|DQ145721.1| Homo sapiens v-abl Abelson murine leukemia viral oncogene homolog 1 (ABL1) gene, complete cds Length = 176708 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 cacacttcacaacacatc 24 |||||||||||||||||| Sbjct: 11100 cacacttcacaacacatc 11083
>emb|BX510923.8| Zebrafish DNA sequence from clone CH211-214J8 in linkage group 5, complete sequence Length = 165838 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 6 ccacacttcacaacacat 23 |||||||||||||||||| Sbjct: 60502 ccacacttcacaacacat 60485
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 aaccacacttcacaacac 21 |||||||||||||||||| Sbjct: 3336647 aaccacacttcacaacac 3336664
>dbj|AP004460.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0438H08 Length = 148626 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 aaccacacttcacaacac 21 |||||||||||||||||| Sbjct: 114214 aaccacacttcacaacac 114231
>emb|AL359092.14| Human DNA sequence from clone RP11-57C19 on chromosome 9, complete sequence Length = 173463 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 cacacttcacaacacatc 24 |||||||||||||||||| Sbjct: 117823 cacacttcacaacacatc 117806
>dbj|AP006292.2| Homo sapiens genomic DNA, chromosome 9 clone:RP11-1252A13, complete sequence Length = 208026 Score = 36.2 bits (18), Expect = 9.7 Identities = 24/26 (92%) Strand = Plus / Minus Query: 5 accacacttcacaacacatccctggg 30 |||||||||||||| | ||||||||| Sbjct: 144256 accacacttcacaaaatatccctggg 144231
>emb|AL772272.14| Mouse DNA sequence from clone RP23-369I8 on chromosome 4, complete sequence Length = 129858 Score = 36.2 bits (18), Expect = 9.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 17 aacacatccctgggtgat 34 |||||||||||||||||| Sbjct: 120724 aacacatccctgggtgat 120707 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 346,840 Number of Sequences: 3902068 Number of extensions: 346840 Number of successful extensions: 19200 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 19178 Number of HSP's gapped (non-prelim): 22 length of query: 65 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 44 effective length of database: 17,151,101,840 effective search space: 754648480960 effective search space used: 754648480960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)