ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart60a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ZN198_HUMAN (Q9UBW7) Zinc finger protein 198 (Zinc finger MYM-ty... 28 4.7

>ZN198_HUMAN (Q9UBW7) Zinc finger protein 198 (Zinc finger MYM-type protein 2)|
           (Fused in myeloproliferative disorders protein)
           (Rearranged in atypical myeloproliferative disorder
           protein)
          Length = 1377

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
 Frame = -2

Query: 239 DWYRGSRRCHCCGF--LITKTNQWRKHGQHM--ESCFLR 135
           DWY  + RC CC     + +  QWR   +H   + C LR
Sbjct: 760 DWYYKAARCDCCKSQGTLKERVQWRGEMKHFCDQHCLLR 798


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,301,014
Number of Sequences: 219361
Number of extensions: 614028
Number of successful extensions: 1635
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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