Clone Name | rbart60a01 |
---|---|
Clone Library Name | barley_pub |
>emb|AL161513.2|ATCHRIV25 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 25 Length = 179771 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 tagtacacaaattacataatta 60 |||||||||||||||||||||| Sbjct: 98278 tagtacacaaattacataatta 98257
>gb|AF128396.1|T3H13 Arabidopsis thaliana BAC T3H13 Length = 118737 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 39 tagtacacaaattacataatta 60 |||||||||||||||||||||| Sbjct: 64572 tagtacacaaattacataatta 64551
>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence Length = 130987 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 tacaattgtagtagtacacaaatta 52 |||| |||||||||||||||||||| Sbjct: 127418 tacagttgtagtagtacacaaatta 127442
>emb|AL357115.24| Human DNA sequence from clone RP11-102P23 on chromosome Xq13.3-21.1 Contains the 5' end of the NSBP1 gene for nucleosomal binding protein 1 and the SH3BGRL gene for SH3 domain binding glutamic acid-rich protein like, complete sequence Length = 164012 Score = 42.1 bits (21), Expect = 0.86 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 atcttcacaactccttaggaaacac 147 ||||||||||||| ||||||||||| Sbjct: 79042 atcttcacaactctttaggaaacac 79066
>gb|AY810015.1| Schistosoma japonicum SJCHGC04103 protein mRNA, partial cds Length = 804 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ttgactttgatacaattgta 37 |||||||||||||||||||| Sbjct: 294 ttgactttgatacaattgta 275
>emb|CT009533.6| Platypus DNA sequence from clone XX-522J9, complete sequence Length = 149919 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 tgatcagaaacccacagcaa 210 |||||||||||||||||||| Sbjct: 7563 tgatcagaaacccacagcaa 7582
>gb|AC067807.10| Homo sapiens chromosome 11, clone RP11-738J16, complete sequence Length = 166312 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tgcattatatcatatatctt 127 |||||||||||||||||||| Sbjct: 98300 tgcattatatcatatatctt 98319
>gb|AC079400.6| Homo sapiens BAC clone RP11-485M18 from 2, complete sequence Length = 113114 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 agtaggtgcattatatcata 121 |||||||||||||||||||| Sbjct: 105866 agtaggtgcattatatcata 105847
>emb|BX649512.4| Mouse DNA sequence from clone RP24-87G15 on chromosome 2, complete sequence Length = 132230 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 cattgactttgatacaattg 35 |||||||||||||||||||| Sbjct: 20043 cattgactttgatacaattg 20024
>dbj|AP003718.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-203F8, complete sequence Length = 85000 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tgcattatatcatatatctt 127 |||||||||||||||||||| Sbjct: 18588 tgcattatatcatatatctt 18569 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,068,047 Number of Sequences: 3902068 Number of extensions: 2068047 Number of successful extensions: 40257 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40246 Number of HSP's gapped (non-prelim): 11 length of query: 261 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 239 effective length of database: 17,147,199,772 effective search space: 4098180745508 effective search space used: 4098180745508 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)