Clone Name | rbart59h11 |
---|---|
Clone Library Name | barley_pub |
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 48.1 bits (24), Expect = 0.013 Identities = 24/24 (100%) Strand = Plus / Minus Query: 8 gaactcaactcaactcagctgaac 31 |||||||||||||||||||||||| Sbjct: 21312 gaactcaactcaactcagctgaac 21289
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 48.1 bits (24), Expect = 0.013 Identities = 24/24 (100%) Strand = Plus / Minus Query: 8 gaactcaactcaactcagctgaac 31 |||||||||||||||||||||||| Sbjct: 125416 gaactcaactcaactcagctgaac 125393
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 48.1 bits (24), Expect = 0.013 Identities = 24/24 (100%) Strand = Plus / Minus Query: 8 gaactcaactcaactcagctgaac 31 |||||||||||||||||||||||| Sbjct: 167303 gaactcaactcaactcagctgaac 167280
>gb|AC102626.9| Mus musculus chromosome 12, clone RP23-456E21, complete sequence Length = 222905 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Plus Query: 6 ctgaactcaactcaactcagctgaac 31 |||||||||||| ||||||||||||| Sbjct: 82835 ctgaactcaactgaactcagctgaac 82860
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgaactcaactcaactcagct 27 |||||||||||||||||||||| Sbjct: 146228 ctgaactcaactcaactcagct 146249
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 44.1 bits (22), Expect = 0.20 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ctgaactcaactcaactcagct 27 |||||||||||||||||||||| Sbjct: 38068 ctgaactcaactcaactcagct 38089
>emb|CT025710.9| Mouse DNA sequence from clone RP23-261P14 on chromosome 12, complete sequence Length = 225685 Score = 44.1 bits (22), Expect = 0.20 Identities = 25/26 (96%) Strand = Plus / Plus Query: 6 ctgaactcaactcaactcagctgaac 31 |||||||||||| ||||||||||||| Sbjct: 191923 ctgaactcaactgaactcagctgaac 191948
>emb|AL161786.12| Human DNA sequence from clone RP11-344L17 on chromosome 9 Contains the 5' end of a novel gene (MGC20553), complete sequence Length = 145676 Score = 42.1 bits (21), Expect = 0.80 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ttctcagagtatgcacaccaa 97 ||||||||||||||||||||| Sbjct: 100378 ttctcagagtatgcacaccaa 100358
>gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complete sequence Length = 161579 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 caactcaactcagctgaacacatt 36 ||||||||||||||||||| |||| Sbjct: 48867 caactcaactcagctgaactcatt 48890
>emb|BX957246.7| Zebrafish DNA sequence from clone CH211-89F7 in linkage group 5, complete sequence Length = 186135 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 ctctctctgactgactgaca 213 |||||||||||||||||||| Sbjct: 159959 ctctctctgactgactgaca 159978
>gb|AC092422.3| Homo sapiens chromosome 3 clone RP11-537O8, complete sequence Length = 188643 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 aacacattacattttacatcccct 52 |||||||||||||| ||||||||| Sbjct: 30063 aacacattacatttcacatcccct 30040
>emb|BX323078.8| Zebrafish DNA sequence from clone DKEYP-55A5 in linkage group 3, complete sequence Length = 174108 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aacacattacattttacatc 48 |||||||||||||||||||| Sbjct: 6468 aacacattacattttacatc 6487
>emb|BX664629.10| Zebrafish DNA sequence from clone DKEY-30G10 in linkage group 22, complete sequence Length = 256437 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tctgaactcaactcaactca 24 |||||||||||||||||||| Sbjct: 143459 tctgaactcaactcaactca 143440
>emb|BX569795.5| Zebrafish DNA sequence from clone CH211-206A19 in linkage group 22, complete sequence Length = 162622 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 tctgaactcaactcaactca 24 |||||||||||||||||||| Sbjct: 158001 tctgaactcaactcaactca 158020
>gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 of 118 of the complete sequence Length = 145958 Score = 40.1 bits (20), Expect = 3.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 caactcaactcagctgaacacatt 36 ||||||||||||||||||| |||| Sbjct: 87336 caactcaactcagctgaactcatt 87359
>emb|BX649554.17| Zebrafish DNA sequence from clone DKEYP-71F10 in linkage group 3, complete sequence Length = 99813 Score = 40.1 bits (20), Expect = 3.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 aacacattacattttacatc 48 |||||||||||||||||||| Sbjct: 90284 aacacattacattttacatc 90303 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,826,911 Number of Sequences: 3902068 Number of extensions: 1826911 Number of successful extensions: 36596 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 36564 Number of HSP's gapped (non-prelim): 32 length of query: 244 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 222 effective length of database: 17,147,199,772 effective search space: 3806678349384 effective search space used: 3806678349384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)