ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1) 40 0.002
2BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1) 35 0.045

>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)|
          Length = 249

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -1

Query: 366 FVAVLVRVLIIMLKNAGDKSED 301
           FVAVLVR+L+IMLKNA DKSE+
Sbjct: 221 FVAVLVRILVIMLKNASDKSEE 242



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>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)|
          Length = 247

 Score = 35.0 bits (79), Expect = 0.045
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = -1

Query: 366 FVAVLVRVLIIMLKNAGDKSE 304
           FVAV VR+LIIMLKN+ DK E
Sbjct: 220 FVAVFVRILIIMLKNSADKEE 240


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,269,495
Number of Sequences: 219361
Number of extensions: 333575
Number of successful extensions: 786
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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