>gb|U43495.1|HVU43495 Hordeum vulgare jasmonate-induced mRNA, partial 3' sequence
          Length = 779

 Score =  682 bits (344), Expect = 0.0
 Identities = 347/348 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccatcatattcatgtgtcgctcatgtatagtgtatattgttggaaacattcacttatttt 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 761 ccatcatattcatgtgtcgctcatgcatagtgtatattgttggaaacattcacttatttt 702

                                                                       
Query: 61  gcataaaatgggaaatatactaggaacggtcgacaaaccgtaagccgttatttagaacct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gcataaaatgggaaatatactaggaacggtcgacaaaccgtaagccgttatttagaacct 642

                                                                       
Query: 121 cggtcttggcaacgagcacagcgccgtgaatcacatcaacgcccactctcctcctagtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 cggtcttggcaacgagcacagcgccgtgaatcacatcaacgcccactctcctcctagtga 582

                                                                       
Query: 181 atggccgatgcgagtaacttaacttagatgtgcttgaagtcctggagcgtccatcgccca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 atggccgatgcgagtaacttaacttagatgtgcttgaagtcctggagcgtccatcgccca 522

                                                                       
Query: 241 tctccccccttgaccatgaacttgtgcttcggcacccaccagctcgccggcaccgggtgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 tctccccccttgaccatgaacttgtgcttcggcacccaccagctcgccggcaccgggtgc 462

                                                           
Query: 301 tcgtccgcgagcgcatcggcacccttgttcaccagcgctatgtcacgg 348
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tcgtccgcgagcgcatcggcacccttgttcaccagcgctatgtcacgg 414

>ref|XM_470493.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1724

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 231 ccatcgcccatctcccccctt 251
           |||||||||||||||||||||
Sbjct: 176 ccatcgcccatctcccccctt 196

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 231      ccatcgcccatctcccccctt 251
                |||||||||||||||||||||
Sbjct: 35925005 ccatcgcccatctcccccctt 35925025

>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 231   ccatcgcccatctcccccctt 251
             |||||||||||||||||||||
Sbjct: 36120 ccatcgcccatctcccccctt 36100

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 231      ccatcgcccatctcccccctt 251
                |||||||||||||||||||||
Sbjct: 36015135 ccatcgcccatctcccccctt 36015155

>dbj|AK102968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115J18, full
           insert sequence
          Length = 1749

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 231 ccatcgcccatctcccccctt 251
           |||||||||||||||||||||
Sbjct: 196 ccatcgcccatctcccccctt 216

>ref|NM_192379.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 285  cgccggcaccgggtgctcgtccgcgagcgcatcggcacccttgttcaccagcgctatgtc 344
            |||||||||| ||| |||||||  |||||| ||  |  |||||||||||||||| | |||
Sbjct: 1170 cgccggcacctggtactcgtccctgagcgcgtccacttccttgttcaccagcgccaggtc 1111

                
Query: 345  acgg 348
            ||||
Sbjct: 1110 acgg 1107

>gb|AC125531.3| Mus musculus BAC clone RP23-396D12 from chromosome 10, complete
             sequence
          Length = 219818

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    attttgcataaaatgggaaa 75
             ||||||||||||||||||||
Sbjct: 73416 attttgcataaaatgggaaa 73435

>emb|AL354706.11| Human DNA sequence from clone RP11-229I7 on chromosome 13, complete
             sequence
          Length = 96045

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ttcacttattttgcataaaa 68
             ||||||||||||||||||||
Sbjct: 29584 ttcacttattttgcataaaa 29603

>gb|AF403051.1|AF403051 Pseudorabies virus strain Fa glycoprotein C gene, complete cds
          Length = 1562

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 291 caccgggtgctcgtccgcga 310
           ||||||||||||||||||||
Sbjct: 916 caccgggtgctcgtccgcga 897

>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   caccgggtgctcgtccgcga 310
             ||||||||||||||||||||
Sbjct: 54862 caccgggtgctcgtccgcga 54843

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                            
Query: 285      cgccggcaccgggtgctcgtccgcgagcgcatcggcacccttgttcaccagcgctatgtc 344
                |||||||||| ||| |||||||  |||||| ||  |  |||||||||||||||| | |||
Sbjct: 26317752 cgccggcacctggtactcgtccctgagcgcgtccacttccttgttcaccagcgccaggtc 26317693

                    
Query: 345      acgg 348
                ||||
Sbjct: 26317692 acgg 26317689

>gb|AC133106.3| Homo sapiens BAC clone RP11-634B17 from 2, complete sequence
          Length = 109568

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    taaaatgggaaatatactag 83
             ||||||||||||||||||||
Sbjct: 81268 taaaatgggaaatatactag 81249

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 292     accgggtgctcgtccgcgag 311
               ||||||||||||||||||||
Sbjct: 4606525 accgggtgctcgtccgcgag 4606506

>dbj|AP003792.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1159_D09
          Length = 147770

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                          
Query: 285    cgccggcaccgggtgctcgtccgcgagcgcatcggcacccttgttcaccagcgctatgtc 344
              |||||||||| ||| |||||||  |||||| ||  |  |||||||||||||||| | |||
Sbjct: 130433 cgccggcacctggtactcgtccctgagcgcgtccacttccttgttcaccagcgccaggtc 130374

                  
Query: 345    acgg 348
              ||||
Sbjct: 130373 acgg 130370

>dbj|AK102737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106C14, full
            insert sequence
          Length = 1577

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 285  cgccggcaccgggtgctcgtccgcgagcgcatcggcacccttgttcaccagcgctatgtc 344
            |||||||||| ||| |||||||  |||||| ||  |  |||||||||||||||| | |||
Sbjct: 1302 cgccggcacctggtactcgtccctgagcgcgtccacttccttgttcaccagcgccaggtc 1243

                
Query: 345  acgg 348
            ||||
Sbjct: 1242 acgg 1239

>gb|AF158090.1|AF158090 Pseudorabies virus glycoprotein C (gC) gene, complete cds
          Length = 1755

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  caccgggtgctcgtccgcga 310
            ||||||||||||||||||||
Sbjct: 1059 caccgggtgctcgtccgcga 1040

>emb|AL357153.4|CNS05TDV Human chromosome 14 DNA sequence BAC C-2540L5 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 209483

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gctcatgtatagtgtatatt 38
              ||||||||||||||||||||
Sbjct: 149372 gctcatgtatagtgtatatt 149391

>emb|CR388379.15| Zebrafish DNA sequence from clone CH211-129O15, complete sequence
          Length = 149807

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     gaaacattcacttattttgc 62
              ||||||||||||||||||||
Sbjct: 101727 gaaacattcacttattttgc 101708

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 176     agtgaatggccgatgcgagt 195
               ||||||||||||||||||||
Sbjct: 6301611 agtgaatggccgatgcgagt 6301630

>gb|M12778.1|SH1GGIII Pseudorabies virus (PRV) glycoprotein gIII mRNA, complete cds
          Length = 1722

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 291  caccgggtgctcgtccgcga 310
            ||||||||||||||||||||
Sbjct: 1029 caccgggtgctcgtccgcga 1010

>dbj|D49437.1|SH1GGIII3 Pseudorabies virus DNA for glycoprotein gIII, complete cds
          Length = 1584

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 291 caccgggtgctcgtccgcga 310
           ||||||||||||||||||||
Sbjct: 919 caccgggtgctcgtccgcga 900

>dbj|D49436.1|SH1GGIII2 Pseudorabies virus DNA for glycoprotein gIII, complete cds
          Length = 1579

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 291 caccgggtgctcgtccgcga 310
           ||||||||||||||||||||
Sbjct: 916 caccgggtgctcgtccgcga 897

>dbj|D49435.1|SH1GGIII1 Pseudorabies virus DNA for glycoprotein gIII, complete cds
          Length = 1584

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 291 caccgggtgctcgtccgcga 310
           ||||||||||||||||||||
Sbjct: 919 caccgggtgctcgtccgcga 900


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,388,472
Number of Sequences: 3902068
Number of extensions: 2388472
Number of successful extensions: 47730
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 47550
Number of HSP's gapped (non-prelim): 184
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)