>ref|XM_482655.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2168

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                      
Query: 279  ctcttgtcccacgccgacacgttgtactcggactcggtgacggggctcacgacgtccg 336
            ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1675 ctcttgtcccacgccgacacgttgtactccgactccgtgacggggctcacgacgtccg 1618



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 152  tcacgggtggcctctgatccacagcagcgtccgcctcgcgaacgaagacgcctcgtccgc 211
            |||| |||| |||| |||||||||||||||||||| ||||||||| | ||||||||| ||
Sbjct: 1838 tcacaggtgtcctcggatccacagcagcgtccgccgcgcgaacgacggcgcctcgtcggc 1779

                     
Query: 212  cctcgagct 220
            |||||||||
Sbjct: 1778 cctcgagct 1770

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                          
Query: 279      ctcttgtcccacgccgacacgttgtactcggactcggtgacggggctcacgacgtccg 336
                ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 21694690 ctcttgtcccacgccgacacgttgtactccgactccgtgacggggctcacgacgtccg 21694633



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                            
Query: 152      tcacgggtggcctctgatccacagcagcgtccgcctcgcgaacgaagacgcctcgtccgc 211
                |||| |||| |||| |||||||||||||||||||| ||||||||| | ||||||||| ||
Sbjct: 21694853 tcacaggtgtcctcggatccacagcagcgtccgccgcgcgaacgacggcgcctcgtcggc 21694794

                         
Query: 212      cctcgagct 220
                |||||||||
Sbjct: 21694793 cctcgagct 21694785

>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0479C12
          Length = 136799

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                       
Query: 279   ctcttgtcccacgccgacacgttgtactcggactcggtgacggggctcacgacgtccg 336
             ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 62260 ctcttgtcccacgccgacacgttgtactccgactccgtgacggggctcacgacgtccg 62203



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                         
Query: 152   tcacgggtggcctctgatccacagcagcgtccgcctcgcgaacgaagacgcctcgtccgc 211
             |||| |||| |||| |||||||||||||||||||| ||||||||| | ||||||||| ||
Sbjct: 62423 tcacaggtgtcctcggatccacagcagcgtccgccgcgcgaacgacggcgcctcgtcggc 62364

                      
Query: 212   cctcgagct 220
             |||||||||
Sbjct: 62363 cctcgagct 62355

>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0708B04
          Length = 170523

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                        
Query: 279    ctcttgtcccacgccgacacgttgtactcggactcggtgacggggctcacgacgtccg 336
              ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 154864 ctcttgtcccacgccgacacgttgtactccgactccgtgacggggctcacgacgtccg 154807



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                          
Query: 152    tcacgggtggcctctgatccacagcagcgtccgcctcgcgaacgaagacgcctcgtccgc 211
              |||| |||| |||| |||||||||||||||||||| ||||||||| | ||||||||| ||
Sbjct: 155027 tcacaggtgtcctcggatccacagcagcgtccgccgcgcgaacgacggcgcctcgtcggc 154968

                       
Query: 212    cctcgagct 220
              |||||||||
Sbjct: 154967 cctcgagct 154959

>dbj|AK106866.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-C12, full
            insert sequence
          Length = 2168

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                      
Query: 279  ctcttgtcccacgccgacacgttgtactcggactcggtgacggggctcacgacgtccg 336
            ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 1675 ctcttgtcccacgccgacacgttgtactccgactccgtgacggggctcacgacgtccg 1618



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                        
Query: 152  tcacgggtggcctctgatccacagcagcgtccgcctcgcgaacgaagacgcctcgtccgc 211
            |||| |||| |||| |||||||||||||||||||| ||||||||| | ||||||||| ||
Sbjct: 1838 tcacaggtgtcctcggatccacagcagcgtccgccgcgcgaacgacggcgcctcgtcggc 1779

                     
Query: 212  cctcgagct 220
            |||||||||
Sbjct: 1778 cctcgagct 1770

>gb|BC074602.1| Xenopus tropicalis MGC69252 protein, mRNA (cDNA clone MGC:69252
           IMAGE:5308092), complete cds
          Length = 1634

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 gctcggagcaggggagcaaagaac 139
           |||||||| |||||||||||||||
Sbjct: 414 gctcggagaaggggagcaaagaac 437

>ref|XM_388597.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08421.1)
           partial mRNA
          Length = 2355

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 260 gacgatgctgccgctcctac 279
           ||||||||||||||||||||
Sbjct: 121 gacgatgctgccgctcctac 140

>gb|AC125188.4| Mus musculus BAC clone RP23-303O19 from chromosome 9, complete sequence
          Length = 194053

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 267   ctgccgctcctactcttgtcccac 290
             ||||||||||||||| ||||||||
Sbjct: 86805 ctgccgctcctactcctgtcccac 86782

>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 337     cccgccgcttcggcgctccg 356
               ||||||||||||||||||||
Sbjct: 1392287 cccgccgcttcggcgctccg 1392268

>gb|AF405605.1|AF405605 Raja schmidti 5.8S ribosomal RNA gene and internal transcribed
           spacer 2, partial sequence
          Length = 634

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 332 gtccgcccgccgcttcggcg 351
           ||||||||||||||||||||
Sbjct: 180 gtccgcccgccgcttcggcg 199

>ref|NM_001004822.1| Xenopus tropicalis MGC69252 protein (MGC69252), mRNA
          Length = 1634

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 gctcggagcaggggagcaaagaac 139
           |||||||| |||||||||||||||
Sbjct: 414 gctcggagaaggggagcaaagaac 437

>dbj|AK110174.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-161-G09, full
            insert sequence
          Length = 3039

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  tgccggactcgacgtcccag 257
            ||||||||||||||||||||
Sbjct: 2489 tgccggactcgacgtcccag 2470

>emb|CR855752.2| Xenopus tropicalis finished cDNA, clone TGas144h21
          Length = 1969

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 116 gctcggagcaggggagcaaagaac 139
           |||||||| |||||||||||||||
Sbjct: 346 gctcggagaaggggagcaaagaac 369


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,333,858
Number of Sequences: 3902068
Number of extensions: 2333858
Number of successful extensions: 44064
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 43997
Number of HSP's gapped (non-prelim): 67
length of query: 378
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 356
effective length of database: 17,147,199,772
effective search space: 6104403118832
effective search space used: 6104403118832
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)