Clone Name | rbart59g06 |
---|---|
Clone Library Name | barley_pub |
>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence Length = 257036 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cataattaagcatcaggact 276 |||||||||||||||||||| Sbjct: 85058 cataattaagcatcaggact 85077
>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3 histone, family 3B (H3F3B) pseudogene, the BMP15 gene for bone morphogenetic protein 15, and a high-mobility group box 1 (HMGB1) pseudogene, complete sequence Length = 125495 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 ttattctgcctgtcagctgg 216 |||||||||||||||||||| Sbjct: 124807 ttattctgcctgtcagctgg 124788
>emb|AL354949.10| Human DNA sequence from clone RP11-82L20 on chromosome 1 Contains part of the NEGR1 gene for neuronal growth regulator 1 and a novel gene, complete sequence Length = 180569 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 tgctttgtttaatctgcttt 162 |||||||||||||||||||| Sbjct: 167724 tgctttgtttaatctgcttt 167743
>emb|AL929442.9| Mouse DNA sequence from clone RP23-95M20 on chromosome 4, complete sequence Length = 176578 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 agatagataggtactaccca 66 |||||||||||||||||||| Sbjct: 112282 agatagataggtactaccca 112301
>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 cataattaagcatcaggact 276 |||||||||||||||||||| Sbjct: 115193 cataattaagcatcaggact 115212
>dbj|AK043962.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830060H14 product:unclassifiable, full insert sequence Length = 1586 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cataattaagcatcaggact 276 |||||||||||||||||||| Sbjct: 681 cataattaagcatcaggact 662
>emb|AL928621.16| Mouse DNA sequence from clone RP23-401G6 on chromosome 2, complete sequence Length = 174248 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 gctttgtttaatctgctttg 163 |||||||||||||||||||| Sbjct: 114203 gctttgtttaatctgctttg 114184 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,823,588 Number of Sequences: 3902068 Number of extensions: 2823588 Number of successful extensions: 43540 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 43531 Number of HSP's gapped (non-prelim): 9 length of query: 352 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 330 effective length of database: 17,147,199,772 effective search space: 5658575924760 effective search space used: 5658575924760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)