ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart59g04 |
|---|---|
| Clone Library Name | barley_pub |
>CNBL9_ARATH (Q9LTB8) Calcineurin B-like protein 9| Length = 212 Score = 87.0 bits (214), Expect = 1e-17 Identities = 40/49 (81%), Positives = 45/49 (91%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDDIIT 248 DGKID+TEW NFV +NPSLLKIMTL YL+DITTTFPSFVF+SEVD+I T Sbjct: 164 DGKIDKTEWSNFVIKNPSLLKIMTLPYLRDITTTFPSFVFNSEVDEIAT 212
>CNBL1_ARATH (O81445) Calcineurin B-like protein 1 (SOS3-like calcium-binding| protein 5) Length = 212 Score = 86.7 bits (213), Expect = 1e-17 Identities = 39/49 (79%), Positives = 45/49 (91%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDDIIT 248 DGKID+ EW +FV++NPSLLKIMTL YL+DITTTFPSFVFHSEVD+I T Sbjct: 164 DGKIDKLEWSDFVNKNPSLLKIMTLPYLRDITTTFPSFVFHSEVDEIAT 212
>CNBL2_ARATH (Q8LAS7) Calcineurin B-like protein 2 (SOS3-like calcium-binding| protein 1) Length = 226 Score = 77.0 bits (188), Expect = 1e-14 Identities = 35/46 (76%), Positives = 40/46 (86%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDD 257 DGKID+ EW + V R+PSLLK MTL YLKDITTTFPSFVFHS+V+D Sbjct: 180 DGKIDKEEWRSLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVED 225
>CNBL3_ARATH (Q8LEM7) Calcineurin B-like protein 3 (SOS3-like calcium-binding| protein 6) Length = 226 Score = 75.5 bits (184), Expect = 3e-14 Identities = 34/46 (73%), Positives = 39/46 (84%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDD 257 DG+ID+ EW V R+PSLLK MTL YLKDITTTFPSFVFHS+V+D Sbjct: 180 DGRIDKEEWRTLVLRHPSLLKNMTLQYLKDITTTFPSFVFHSQVED 225
>CNB10_ARATH (Q7FRS8) Calcineurin B-like protein 10| Length = 256 Score = 67.8 bits (164), Expect = 6e-12 Identities = 29/46 (63%), Positives = 38/46 (82%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDD 257 DGKI + EW +V ++PSLLK MTL YLKD+TT FPSF+F++EV+D Sbjct: 211 DGKISKDEWNVYVHKHPSLLKNMTLPYLKDVTTAFPSFIFNTEVED 256
>CNBL7_ARATH (Q9SUA6) Calcineurin B-like protein 7 (SOS3-like calcium-binding| protein 3) Length = 214 Score = 67.0 bits (162), Expect = 1e-11 Identities = 31/46 (67%), Positives = 36/46 (78%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDD 257 +G ID EW + V R+P LLK MTL YLKDITTTFPSFV HS+V+D Sbjct: 168 EGMIDEEEWMDLVFRHPLLLKNMTLQYLKDITTTFPSFVLHSQVED 213
>CNBL8_ARATH (Q9FUQ7) Calcineurin B-like protein 8| Length = 214 Score = 66.2 bits (160), Expect = 2e-11 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDD 257 DGKID EW+ V++NPS+LK MTL YLK++T FPSFV SEV+D Sbjct: 169 DGKIDEEEWKELVAKNPSILKNMTLPYLKEVTLAFPSFVLDSEVED 214
>CNBL6_ARATH (Q9C5P6) Calcineurin B-like protein 6 (SOS3-like calcium-binding| protein 2) Length = 226 Score = 63.9 bits (154), Expect = 9e-11 Identities = 28/46 (60%), Positives = 37/46 (80%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDD 257 DGKID+ EW + V R+PSLL+ M+L +LKD+T TFP+FVFH+ V D Sbjct: 174 DGKIDKEEWRSLVLRHPSLLQNMSLQHLKDVTKTFPNFVFHTIVTD 219
>CNBL4_ARATH (O81223) Calcineurin B-like protein 4 (Protein SALT OVERLY| SENSITIVE 3) Length = 221 Score = 63.2 bits (152), Expect = 1e-10 Identities = 30/47 (63%), Positives = 36/47 (76%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFVFHSEVDDI 254 DGKID EW++FVS NPSL+K MTL YLKDI TFPSFV E +++ Sbjct: 168 DGKIDIDEWKDFVSLNPSLIKNMTLPYLKDINRTFPSFVSSCEEEEM 214
>CNBL5_ARATH (Q7FZF1) Calcineurin B-like protein 5 (SOS3-like calcium-binding| protein 4) Length = 202 Score = 47.8 bits (112), Expect = 6e-06 Identities = 22/39 (56%), Positives = 27/39 (69%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPSLLKIMTLSYLKDITTTFPSFV 278 DG ID EWENFV+ P LK MT+ +LKDI FP+F+ Sbjct: 163 DGIIDLEEWENFVATYPLTLKNMTIPFLKDIPRIFPTFL 201
>LIP9_CANAL (Q9P4E6) Lipase 9 precursor (EC 3.1.1.3)| Length = 453 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -2 Query: 394 DGKIDRTEWENFVSRNPS-LLKIMTLSYLKDITTTFPSFVFHSEVDDI 254 D K+ ++ W F + S ++K L Y K + T P F++H +D I Sbjct: 298 DNKVFKSGWNIFKNLVVSKIVKDNGLVYQKQLIPTIPVFIYHGSMDQI 345
>HOX3_XENLA (P50476) Homeobox protein XHOX-3| Length = 388 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/67 (29%), Positives = 29/67 (43%) Frame = +2 Query: 95 RCNEHHPERKKNYFSTLEQH*LASSMLHRCIYSDDRFLLSVNCTSL*GSPSCNDIINL*M 274 R + HP + ST QH +SS Y + + V+CT P CN + Sbjct: 80 RISSPHPPAHSDSLSTKGQH--SSSDTESDFYEE----IEVSCT-----PDCNSAASDYQ 128 Query: 275 KHKAGKC 295 +H AG+C Sbjct: 129 QHSAGQC 135
>DPLD_DROME (Q9V4M2) Protein dappled| Length = 832 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +3 Query: 282 KLGNVVVMSLRYERVIIFNKEGFLDTKF 365 K+G+V+V R RV +FN +G L KF Sbjct: 560 KMGHVLVSDRRNNRVQVFNPDGSLKFKF 587
>ICOS_CANFA (Q7YR73) Inducible T-cell co-stimulator precursor| (Activation-inducible lymphocyte immunomediatory molecule) (CD278 antigen) Length = 208 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/58 (27%), Positives = 26/58 (44%) Frame = +3 Query: 57 LTNIHEYLTRLTLGVMNTTQKERKTISRLSSNIS*HQACCIVAYILTIGSFFLLTVHL 230 L + H L + + +RK ISR N+ Q CC + + L IG + V++ Sbjct: 98 LDSSHASYYACQLSIFDPPPFQRKNISREYLNVYESQTCCQLKFWLPIGCAAFVVVYI 155
>R1AB_IBVBC (Q91QT2) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p87; p195 (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Peptide HD2 (p41); 3C-like proteinase (EC 3.4.22.-) (3CL- Length = 6629 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%) Frame = -1 Query: 185 CNDATCLMLANVARESRNSFSFFLGG----VH-YTES 90 C D TC + VAR +R S +GG VH YT S Sbjct: 1920 CKDVTCEVCKRVARSNRQEVSVVVGGRKQIVHVYTNS 1956
>R1AB_IBVB (P27920) Replicase polyprotein 1ab (pp1ab) (ORF1ab polyprotein)| [Includes: Replicase polyprotein 1a (pp1a) (ORF1a)] [Contains: p87; p195 (EC 3.4.22.-) (Papain-like proteinase) (PL-PRO); Peptide HD2 (p41); 3C-like proteinase (EC 3.4.22.-) (3CL-P Length = 6629 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 5/37 (13%) Frame = -1 Query: 185 CNDATCLMLANVARESRNSFSFFLGG----VH-YTES 90 C D TC + VAR +R S +GG VH YT S Sbjct: 1920 CKDVTCEVCKRVARSNRQEVSVVVGGRKQIVHVYTNS 1956
>DPOL_ADEB2 (O72539) DNA polymerase (EC 2.7.7.7)| Length = 1017 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = -2 Query: 388 KIDRTEWENFVSRNPSLLKIMT---LSYLKDIT 299 ++ R W+NFV NP L +I ++++ DIT Sbjct: 187 QVTRLLWDNFVGENPELAEIQERHHVNHIDDIT 219 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,679,437 Number of Sequences: 219361 Number of extensions: 1044801 Number of successful extensions: 2405 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2381 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2405 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
