ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart59g01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB029935.1| Triticum aestivum mRNA for chitinase 2, complete cds Length = 1163 Score = 258 bits (130), Expect = 1e-65 Identities = 157/166 (94%) Strand = Plus / Minus Query: 216 atctcactgtaccgcgagcccgatgttgaacgacaattggttgtagcagtcgaggttatt 275 |||||||||| |||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 983 atctcactgtgccgcgagcccaacgttgaacgacaattggttgtagcagtcgaggttatt 924 Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggccac 335 |||||||||||||||||| |||||||| ||||||||||||||||||||||| || ||||| Sbjct: 923 cccgtagccgatgccgaaaatgtcacaatagcgcttgtagaacccgatccgatccgccac 864 Query: 336 cttgtcgttctgccccttgccgcattcgatcccgccattgatgacg 381 |||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 863 cttgtcgttctgccccatgccgcattcgatcccgccgttgatgacg 818 Score = 89.7 bits (45), Expect = 6e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 101 aggtctggacatccatttatttggtcataaaatacttaccaagattatttatttgtgggt 160 |||||||| |||||||||||||||||||||| ||||| |||||||||||||||| || || Sbjct: 1085 aggtctggtcatccatttatttggtcataaagtacttcccaagattatttatttatgtgt 1026 Query: 161 gatca 165 ||||| Sbjct: 1025 gatca 1021
>gb|AF000965.1|AF000965 Poa pratensis chitinase (Chi3) pseudogene sequence Length = 1173 Score = 109 bits (55), Expect = 7e-21 Identities = 109/127 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| ||||| | |||||||| || ||||| || ||| |||||||||||| Sbjct: 1134 tggttgtagcagtccaggttgtccccgtagctgacgccgaggaggtcgcagtagcgcttg 1075 Query: 313 tagaacccgatccggtcggccaccttgtcgttctgccccttgccgcattcgatcccgcca 372 ||||||||||||| |||||| || || || ||||||||||||||| |||| |||||| Sbjct: 1074 tagaacccgatcctgtcggcgacgcggttgtcctgccccttgccgcactcgagcccgccg 1015 Query: 373 ttgatga 379 ||||||| Sbjct: 1014 ttgatga 1008
>gb|AF000966.1|AF000966 Poa pratensis chitinase (Chi2) gene, complete cds Length = 1080 Score = 101 bits (51), Expect = 2e-18 Identities = 105/123 (85%) Strand = Plus / Minus Query: 257 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaga 316 |||||||||| ||||| || ||||||| || ||||| || ||| |||||||||||||||| Sbjct: 967 tgtagcagtccaggttgtttccgtagctgacgccgaggaggtcgcagtagcgcttgtaga 908 Query: 317 acccgatccggtcggccaccttgtcgttctgccccttgccgcattcgatcccgccattga 376 ||||||||||||| || || || || |||||| |||||||| |||| ||||||||||| Sbjct: 907 acccgatccggtctgcgacgcggttgtcctgccctttgccgcactcgagcccgccattga 848 Query: 377 tga 379 ||| Sbjct: 847 tga 845
>emb|X54367.1|OSCHIT Oryza sativa (rice) gene for endochitinase Length = 1237 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 1080 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 1021 Query: 313 tagaacccgatccggtcggccaccttgtcgt 343 ||||||||||||||||||||||||||||||| Sbjct: 1020 tagaacccgatccggtcggccaccttgtcgt 990
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 30372331 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 30372272 Query: 313 tagaacccgatccggtcggccaccttgtcgt 343 ||||||||||||||||||||||||||||||| Sbjct: 30372271 tagaacccgatccggtcggccaccttgtcgt 30372241 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 30375940 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 30375881 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 30375880 tagaacccaatccggtcggc 30375861
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 9692 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 9633 Query: 313 tagaacccgatccggtcggccaccttgtcgt 343 ||||||||||||||||||||||||||||||| Sbjct: 9632 tagaacccgatccggtcggccaccttgtcgt 9602 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 13301 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 13242 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 13241 tagaacccaatccggtcggc 13222
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 118926 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 118867 Query: 313 tagaacccgatccggtcggccaccttgtcgt 343 ||||||||||||||||||||||||||||||| Sbjct: 118866 tagaacccgatccggtcggccaccttgtcgt 118836 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 122535 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 122476 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 122475 tagaacccaatccggtcggc 122456
>dbj|AK061280.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F06, full insert sequence Length = 1169 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 1018 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 959 Query: 313 tagaacccgatccggtcggccaccttgtcgt 343 ||||||||||||||||||||||||||||||| Sbjct: 958 tagaacccgatccggtcggccaccttgtcgt 928
>dbj|D16223.1|RICCHT3 Oryza sativa (japonica cultivar-group) Cht-3 gene for endochitinase, complete cds Length = 2808 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 ||||||||||| || ||||||| || |||| || ||| | ||||| |||||||||||| Sbjct: 2773 tggttgtagcaatccaggttatcgccatagctgacgcccagcatgtcgcagtagcgcttg 2714 Query: 313 tagaacccgatccggtcggccaccttgtcgt 343 ||||||||||||||||||||||||||||||| Sbjct: 2713 tagaacccgatccggtcggccaccttgtcgt 2683
>emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochitinase Length = 556 Score = 87.7 bits (44), Expect = 2e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 257 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaga 316 |||||||||||||||| || |||||||| | ||||| |||||| |||||||||||||| | Sbjct: 517 tgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcagtagcgcttgtaaa 458 Query: 317 acccgatccggtcggc 332 |||||||||| ||||| Sbjct: 457 acccgatccgatcggc 442
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds Length = 1684 Score = 87.7 bits (44), Expect = 2e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 257 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaga 316 |||||||||||||||| || |||||||| | ||||| |||||| |||||||||||||| | Sbjct: 1536 tgtagcagtcgaggttgttgccgtagccaacgccgaggatgtcgcagtagcgcttgtaaa 1477 Query: 317 acccgatccggtcggc 332 |||||||||| ||||| Sbjct: 1476 acccgatccgatcggc 1461
>emb|Z29962.1|OSCHITIB O.sativa (PCH6) mRNA for chitinase class I Length = 1100 Score = 85.7 bits (43), Expect = 1e-13 Identities = 43/43 (100%) Strand = Plus / Minus Query: 301 cagtagcgcttgtagaacccgatccggtcggccaccttgtcgt 343 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 902 cagtagcgcttgtagaacccgatccggtcggccaccttgtcgt 860
>gb|AY973230.1| Triticum aestivum cultivar Sumai 3 class II chitinase gene, complete cds Length = 811 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| | ||||| |||||| |||||||||||| Sbjct: 785 tggttgtagcagtcgaggttgtcgccgtagccaacgccgaggatgtcgcagtagcgcttg 726 Query: 313 tagaacccgatccg 326 || ||||||||||| Sbjct: 725 taaaacccgatccg 712
>gb|AY973229.1| Triticum aestivum cultivar Gamenya class II chitinase gene, complete cds Length = 891 Score = 83.8 bits (42), Expect = 4e-13 Identities = 66/74 (89%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| | ||||| |||||| |||||||||||| Sbjct: 785 tggttgtagcagtcgaggttgtcgccgtagccaacgccgaggatgtcgcagtagcgcttg 726 Query: 313 tagaacccgatccg 326 || ||||||||||| Sbjct: 725 taaaacccgatccg 712
>dbj|AB051579.1| Secale cereale rscc mRNA for seed chitinase-c, complete cds Length = 1018 Score = 81.8 bits (41), Expect = 1e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 256 ttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtag 315 ||||||||||||||||| | |||||||| | ||||| |||||| |||||||||||||| Sbjct: 836 ttgtagcagtcgaggttgtcgccgtagccaacgccgaggatgtcgcagtagcgcttgtaa 777 Query: 316 aacccgatccggtcggc 332 ||||||||||| ||||| Sbjct: 776 aacccgatccgatcggc 760
>dbj|AB029936.1| Triticum aestivum Chi 3 mRNA for chitinase 3, complete cds Length = 1148 Score = 81.8 bits (41), Expect = 1e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 252 ttggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgctt 311 ||||||||||||||| ||||| | ||||||| || ||| | || ||| ||||||||||| Sbjct: 996 ttggttgtagcagtccaggttgtcaccgtagctgacgccaaggaggtcgcagtagcgctt 937 Query: 312 gtagaacccgatccggtcggc 332 ||||||||||||||||||||| Sbjct: 936 gtagaacccgatccggtcggc 916
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 96288 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 96229 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 96228 tagaagccgatccggt 96213 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||||| ||||| | ||| |||||||||||||||||| ||| ||||||||| Sbjct: 107042 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 106986 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 87376 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 87317 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 87316 tagaagccgatccggt 87301
>gb|AY444342.1| Oryza sativa chitinase gene, complete cds Length = 1101 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 1064 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 1005 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 1004 tagaagccgatccggt 989
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 19292213 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 19292154 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 19292153 tagaagccgatccggt 19292138 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||||| ||||| | ||| |||||||||||||||||| ||| ||||||||| Sbjct: 19302967 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 19302911 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 19283301 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 19283242 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 19283241 tagaagccgatccggt 19283226
>gb|AF280437.1|AF280437 Secale cereale 31.7 kDa class I endochitinase-antifreeze protein precursor, mRNA, complete cds Length = 1192 Score = 79.8 bits (40), Expect = 6e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| || || | ||||||| || ||||| || |||||||||||||||| Sbjct: 989 tggttgtagcagtccagattgtggccgtagctgacgccgaggaggtcacagtagcgcttg 930 Query: 313 tagaacccgatccggtcggc 332 ||||||||||| |||||||| Sbjct: 929 tagaacccgattcggtcggc 910
>gb|AY437443.1| Triticum aestivum cultivar Ning 7840 class I chitinase mRNA, complete cds Length = 1121 Score = 79.8 bits (40), Expect = 6e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| ||||| | ||||||| || ||||| | ||| |||||||||||| Sbjct: 1009 tggttgtagcagtccaggttgtcgccgtagctgacgccgagtaggtcgcagtagcgcttg 950 Query: 313 tagaacccgatccggtcggc 332 |||||||||||||||||||| Sbjct: 949 tagaacccgatccggtcggc 930
>gb|L34211.1|BLYCHI33A Hordeum vulgare chitinase (CHI33) gene, complete cds Length = 1779 Score = 79.8 bits (40), Expect = 6e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| ||||||||||| ||| | ||||| |||||||||| | Sbjct: 1634 tggttgtagcagtcgaggttgcccccgtagccgacgccaaggatgttgcagtagcgctgg 1575 Query: 313 tagaacccgatccggtcggc 332 ||||| |||||||||||||| Sbjct: 1574 tagaagccgatccggtcggc 1555
>gb|L34210.1|BLYCHI26A Hordeum vulgare chitinase (CHI26) gene, complete cds Length = 3169 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 257 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaga 316 ||||||| |||||||| || |||||||| | ||||| ||||||||||||||||||||| | Sbjct: 2478 tgtagcaatcgaggttgttgccgtagccaacgccgaggatgtcacagtagcgcttgtaaa 2419 Query: 317 acccgatccggtcggc 332 ||||||| || ||||| Sbjct: 2418 acccgattcgatcggc 2403
>gb|L37289.1|RICCHITA Oryza sativa chitinase mRNA, complete cds Length = 1291 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||| ||||||||||||||| |||||||||||||||||| | ||| |||||||||| | Sbjct: 1007 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgtcgcagtagcgctgg 948 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 947 tagaagccgatccggt 932
>gb|M62904.1|BLYCHI H.vulgare L. 26kD chitinase mRNA, complete cds Length = 998 Score = 79.8 bits (40), Expect = 6e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 257 tgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgtaga 316 ||||||| |||||||| || |||||||| | ||||| ||||||||||||||||||||| | Sbjct: 841 tgtagcaatcgaggttgttgccgtagccaacgccgaggatgtcacagtagcgcttgtaaa 782 Query: 317 acccgatccggtcggc 332 ||||||| || ||||| Sbjct: 781 acccgattcgatcggc 766
>gb|AF000964.1|AF000964 Poa pratensis chitinase (Chi1) gene, complete cds Length = 1252 Score = 77.8 bits (39), Expect = 2e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 255 gttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttgta 314 |||||||||||| ||||| | ||||||| || ||||| || ||| |||||||||||||| Sbjct: 975 gttgtagcagtccaggttgtctccgtagctgacgccgaggaggtcgcagtagcgcttgta 916 Query: 315 gaacccgatccggtc 329 ||||||||||||||| Sbjct: 915 gaacccgatccggtc 901 Score = 46.1 bits (23), Expect = 0.082 Identities = 32/35 (91%) Strand = Plus / Minus Query: 345 ctgccccttgccgcattcgatcccgccattgatga 379 |||||| |||||||| |||| |||||||||||||| Sbjct: 879 ctgccctttgccgcactcgagcccgccattgatga 845
>gb|L40336.1|RICCHITB Oryza sativa chitinase (Rcht2) gene, complete cds Length = 5595 Score = 75.8 bits (38), Expect = 9e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 4846 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 4787 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 4786 tagtagccgatgcggtcg 4769
>gb|L40338.1|RICRCH0 Oryza sativa (clone RCH08) chitinase (Rcht2) mRNA, 3' end of cds Length = 652 Score = 75.8 bits (38), Expect = 9e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 509 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 450 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 449 tagtagccgatgcggtcg 432
>gb|AF013580.1|AF013580 Oryza sativa clone RGCH8 chitinase gene, complete cds Length = 2730 Score = 75.8 bits (38), Expect = 9e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 2296 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 2237 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 2236 tagtagccgatgcggtcg 2219
>gb|AF001500.1|OSAF001500 Oryza sativa clone MIRCH1 chitinase mRNA, partial cds Length = 913 Score = 75.8 bits (38), Expect = 9e-11 Identities = 68/78 (87%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||| Sbjct: 756 tggttgtagcagtcgaggttgctcccgtagcctgtgccgagcatgtcgcagtagcgcttg 697 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 696 tagtagccgatgcggtcg 679
>gb|AY997529.2| Musa x paradisiaca chitinase (Chi-1) mRNA, complete cds Length = 1082 Score = 71.9 bits (36), Expect = 1e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 277 ccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||| || ||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 981 ccgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 926
>gb|L40337.1|RICRCH1 Oryza sativa chitinase (Rcht1) mRNA, complete cds Length = 1204 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||| ||||||||||||||| |||||||||||||||||| | || |||||||||| | Sbjct: 971 tggtcgtagcagtcgaggttgctcccgtagccgatgccgagcacgttgcagtagcgctgg 912 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 911 tagaagccgatccggt 896
>ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA Length = 981 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 278 cgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 |||||| || ||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 937 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 883
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 278 cgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 |||||| || ||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 17204043 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 17203989
>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete sequence Length = 115326 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 278 cgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 |||||| || ||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 36787 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 36733
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 278 cgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 |||||| || ||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 95436 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 95382
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 6e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 278 cgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 |||||| || ||||| |||||| ||||||||||||||||| |||||||||||||| Sbjct: 17197612 cgtagctgacgccgaggatgtcgcagtagcgcttgtagaagccgatccggtcggc 17197558
>gb|AY106654.1| Zea mays PCO078819 mRNA sequence Length = 574 Score = 65.9 bits (33), Expect = 9e-08 Identities = 51/57 (89%) Strand = Plus / Plus Query: 275 tcccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcgg 331 ||||||||||||||| ||||| || ||||||||||||||||| || |||||||||| Sbjct: 229 tcccgtagccgatgcggaagacatcgcagtagcgcttgtagaagccaatccggtcgg 285
>gb|AY378172.1| Oryza sativa (japonica cultivar-group) OsmChiI-34 mRNA, partial cds Length = 894 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 890 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 831 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 830 tagaacccaatccggtcggc 811
>emb|Z29961.1|OSCHITIA O.sativa (PCH16) mRNA for chitinase class I Length = 1159 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1073 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 1014 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 1013 tagaacccaatccggtcggc 994
>emb|X87109.1|OSDNARC24 O.sativa RC24 gene Length = 2048 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 2006 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 1947 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 1946 tagaacccaatccggtcggc 1927
>emb|X76041.1|TACHIG T.aestivum (Chinese spring) chi gene for endochitinase Length = 1985 Score = 63.9 bits (32), Expect = 4e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 301 cagtagcgcttgtagaacccgatccggtcggc 332 |||||||||||||||||||||||||||||||| Sbjct: 1531 cagtagcgcttgtagaacccgatccggtcggc 1500
>emb|X56063.1|OSENDO O.sativa mRNA for endochitinase Length = 1160 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 905 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 846 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 845 tagaacccaatccggtcggc 826
>dbj|AK105798.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A08, full insert sequence Length = 1141 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1010 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 951 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 950 tagaacccaatccggtcggc 931
>dbj|AK104020.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-C04, full insert sequence Length = 1136 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1005 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 946 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 945 tagaacccaatccggtcggc 926
>dbj|AK099339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028I21, full insert sequence Length = 1174 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 986 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 927 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 926 tagaacccaatccggtcggc 907
>dbj|AK061042.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-D05, full insert sequence Length = 1217 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 1008 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 949 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 948 tagaacccaatccggtcggc 929
>dbj|D16221.1|RICCHT1 Oryza sativa (japonica cultivar-group) Cht-1 gene for endochitinase, complete cds Length = 2739 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| ||||||| || ||| || ||||| |||||||||||| Sbjct: 2270 tggttgtagcagtccaagttggcgccgtagctgacgcccaacatgtcgcagtagcgcttg 2211 Query: 313 tagaacccgatccggtcggc 332 |||||||| ||||||||||| Sbjct: 2210 tagaacccaatccggtcggc 2191
>emb|Z78202.1|PACHI1 Persea americana mRNA for endochitinase Length = 1120 Score = 61.9 bits (31), Expect = 1e-06 Identities = 70/83 (84%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggccaccttgtcgttctgccccttgcc 356 ||||||||| | ||||||||| || || ||||| ||||||||||| || |||||||| Sbjct: 922 gtcacagtacctcttgtagaagccaatgcggtctgccaccttgtcattgaatcccttgcc 863 Query: 357 gcattcgatcccgccattgatga 379 |||||||||||| || ||||||| Sbjct: 862 gcattcgatcccaccgttgatga 840
>ref|NM_197596.1| Oryza sativa (japonica cultivar-group) chitinase (OSJNBb0015I11.14), mRNA Length = 924 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 767 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 708 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 707 tagtagccgatgcggtcg 690
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 89608 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 89549 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 89548 tagtagccgatgcggtcg 89531 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggtt 272 |||||||||||||||||||| Sbjct: 104334 tggttgtagcagtcgaggtt 104315 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 295 atgtcacagtagcgcttgtagaacccgatccggtcg 330 ||||| ||||||||||||||| | ||||| |||||| Sbjct: 104292 atgtcgcagtagcgcttgtagtagccgatgcggtcg 104257
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 20688156 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 20688097 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 20688096 tagtagccgatgcggtcg 20688079 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggtt 272 |||||||||||||||||||| Sbjct: 20702882 tggttgtagcagtcgaggtt 20702863 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 295 atgtcacagtagcgcttgtagaacccgatccggtcg 330 ||||| ||||||||||||||| | ||||| |||||| Sbjct: 20702840 atgtcgcagtagcgcttgtagtagccgatgcggtcg 20702805
>dbj|AK070067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042L15, full insert sequence Length = 1073 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 793 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 734 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 733 tagtagccgatgcggtcg 716
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 20699428 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 20699369 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 20699368 tagtagccgatgcggtcg 20699351 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggtt 272 |||||||||||||||||||| Sbjct: 20714154 tggttgtagcagtcgaggtt 20714135 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 295 atgtcacagtagcgcttgtagaacccgatccggtcg 330 ||||| ||||||||||||||| | ||||| |||||| Sbjct: 20714112 atgtcgcagtagcgcttgtagtagccgatgcggtcg 20714077
>dbj|AB016497.1| Oryza sativa mRNA for chitinase, complete cds Length = 923 Score = 60.0 bits (30), Expect = 5e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| | |||||||| ||||| ||||| |||||||||||| Sbjct: 773 tggttgtagcagtcgaggttgctgccgtagcctgcgccgagcatgtcgcagtagcgcttg 714 Query: 313 tagaacccgatccggtcg 330 ||| | ||||| |||||| Sbjct: 713 tagtagccgatgcggtcg 696
>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16, complete sequence Length = 170233 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||||| ||||| | ||| |||||||||||||||||| ||| ||||||||| Sbjct: 6316 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 6260
>dbj|AK071196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086B11, full insert sequence Length = 1305 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||||| ||||| | ||| |||||||||||||||||| ||| ||||||||| Sbjct: 1029 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 973
>dbj|AB096139.1| Oryza sativa (japonica cultivar-group) Chia1d mRNA for chitinase, complete cds Length = 1285 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||||| ||||| | ||| |||||||||||||||||| ||| ||||||||| Sbjct: 1016 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 960
>dbj|AB012855.1| Oryza sativa mRNA for chitinase, complete cds Length = 1300 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||||| ||||| | ||| |||||||||||||||||| ||| ||||||||| Sbjct: 1031 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 975
>dbj|AB018248.1| Oryza sativa (indica cultivar-group) mRNA for chitinase, complete cds Length = 1280 Score = 58.0 bits (29), Expect = 2e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 276 cccgtagccgatgccgaagatgtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||||| ||||| | ||| |||||||||||||||||| ||| ||||||||| Sbjct: 1005 cccgtagccgacgccgagcacgtcgcagtagcgcttgtagaacgcgacccggtcggc 949
>emb|X56787.1|OSLMRNAC O.sativa L. mRNA for endochitinase Length = 1186 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 986 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 927 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 926 tagaagccgatccggt 911
>dbj|AK108949.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-C03, full insert sequence Length = 979 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 651 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 592 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 591 tagaagccgatccggt 576
>dbj|D16222.1|RICCHT2 Oryza sativa (japonica cultivar-group) Cht-2 gene for endochitinase, complete cds Length = 2986 Score = 56.0 bits (28), Expect = 9e-05 Identities = 64/76 (84%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||||||||| ||| |||||||||||| | |||||||||||| | Sbjct: 2421 tggttgtagcagtcgaggttgccgccggtgccgatgccgaacgcgccacagtagcgctgg 2362 Query: 313 tagaacccgatccggt 328 ||||| |||||||||| Sbjct: 2361 tagaagccgatccggt 2346
>gb|AY532766.1| Zea diploperennis isolate d8 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532765.1| Zea diploperennis isolate d7 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532764.1| Zea diploperennis isolate d6 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532763.1| Zea diploperennis isolate d5 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532762.1| Zea diploperennis isolate d5b chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532761.1| Zea diploperennis isolate d4 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532760.1| Zea diploperennis isolate d3 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532759.1| Zea diploperennis isolate d2 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532758.1| Zea diploperennis isolate d1 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532757.1| Zea mays subsp. parviglumis isolate p15 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532756.1| Zea mays subsp. parviglumis isolate p14b chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532755.1| Zea mays subsp. parviglumis isolate p14 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532754.1| Zea mays subsp. parviglumis isolate p13b chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532753.1| Zea mays subsp. parviglumis isolate p13 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532752.1| Zea mays subsp. parviglumis isolate p12 chitinase (chiI) gene, complete cds Length = 1082 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532751.1| Zea mays subsp. parviglumis isolate p11 chitinase (chiI) gene, complete cds Length = 1081 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>gb|AY532750.1| Zea mays subsp. parviglumis isolate p9 chitinase (chiI) gene, complete cds Length = 1084 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 909 gtcacagtatcgtttgtagaagccgatccggtcggc 874
>gb|AY532749.1| Zea mays subsp. parviglumis isolate p8 chitinase (chiI) gene, complete cds Length = 1081 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>gb|AY532748.1| Zea mays subsp. parviglumis isolate p6 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532747.1| Zea mays subsp. parviglumis isolate p5 chitinase (chiI) gene, complete cds Length = 1089 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>gb|AY532746.1| Zea mays subsp. parviglumis isolate p4 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532745.1| Zea mays subsp. parviglumis isolate p3 chitinase (chiI) gene, complete cds Length = 1078 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532744.1| Zea mays subsp. parviglumis isolate p2 chitinase (chiI) gene, complete cds Length = 1087 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 903 gtcacagtatcgtttgtagaagccgatccggtcggc 868
>gb|AY532743.1| Zea mays subsp. parviglumis isolate p1 chitinase (chiI) gene, complete cds Length = 1081 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 906 gtcacagtatcgtttgtagaagccgatccggtcggc 871
>dbj|AB051578.1| Secale cereale rsca mRNA for seed chitinase-a, complete cds Length = 1191 Score = 48.1 bits (24), Expect = 0.021 Identities = 66/80 (82%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||| ||||||||||| || || ||||| | | | |||||| |||||||||||| Sbjct: 1007 tggttgtaacagtcgaggttgttgccatagccaacacgaaggatgtcgcagtagcgcttg 948 Query: 313 tagaacccgatccggtcggc 332 || |||||||| || ||||| Sbjct: 947 taaaacccgattcgatcggc 928
>gb|L00973.1|MZECHITC Zea mays acidic class I chitinase mRNA, complete cds Length = 1128 Score = 48.1 bits (24), Expect = 0.021 Identities = 33/36 (91%) Strand = Plus / Minus Query: 297 gtcacagtagcgcttgtagaacccgatccggtcggc 332 ||||||||| || |||||||| |||||||||||||| Sbjct: 921 gtcacagtatcgtttgtagaagccgatccggtcggc 886
>emb|BX572080.18| Zebrafish DNA sequence from clone DKEY-22N17 in linkage group 13, complete sequence Length = 224120 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Plus Query: 166 tcacacccacacacgcacatgca 188 ||||||||||||||||||||||| Sbjct: 180764 tcacacccacacacgcacatgca 180786
>emb|AL772273.11| Zebrafish DNA sequence from clone CH211-153P8, complete sequence Length = 171830 Score = 46.1 bits (23), Expect = 0.082 Identities = 23/23 (100%) Strand = Plus / Minus Query: 166 tcacacccacacacgcacatgca 188 ||||||||||||||||||||||| Sbjct: 164820 tcacacccacacacgcacatgca 164798
>emb|AL035663.18|HS611N7 Human DNA sequence from clone RP4-611N7 on chromosome 20 Contains ESTs, STSs and GSSs, complete sequence Length = 104436 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgca 188 |||||||||||||||||||||| Sbjct: 1266 cacacccacacacgcacatgca 1287
>gb|AC084760.2| Gallus gallus clone WAG-65N20, complete sequence Length = 109569 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 118 tatttggtcataaaatacttac 139 |||||||||||||||||||||| Sbjct: 23660 tatttggtcataaaatacttac 23639
>gb|AC010142.4|AC010142 Homo sapiens BAC clone RP11-240N18 from Y, complete sequence Length = 136462 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgca 188 |||||||||||||||||||||| Sbjct: 89285 cacacccacacacgcacatgca 89306
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Minus Query: 354 gccgcattcgatcccgccattgatga 379 |||||||||||| ||||||||||||| Sbjct: 1140779 gccgcattcgatgccgccattgatga 1140754
>gb|AC163743.6| Mus musculus BAC clone RP23-415J4 from chromosome 13, complete sequence Length = 198305 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgca 188 |||||||||||||||||||||| Sbjct: 162613 cacacccacacacgcacatgca 162634
>gb|AC170897.3| Mus musculus BAC clone RP23-416P3 from chromosome 13, complete sequence Length = 213810 Score = 44.1 bits (22), Expect = 0.33 Identities = 22/22 (100%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatgca 188 |||||||||||||||||||||| Sbjct: 132891 cacacccacacacgcacatgca 132870
>gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, complete sequence Length = 198815 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 atcacacccacacacgcacatgcat 189 ||||||| ||||||||||||||||| Sbjct: 46248 atcacacacacacacgcacatgcat 46224
>emb|AL591393.10| Human DNA sequence from clone RP11-224J22 on chromosome 9 Contains a novel gene (FLJ33868) and 2 CpG islands, complete sequence Length = 174911 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 130 aaatacttaccaagattatttattt 154 |||||||||||||| |||||||||| Sbjct: 80594 aaatacttaccaagtttatttattt 80570
>emb|AL646097.25| Mouse DNA sequence from clone RP23-338M9 on chromosome 11 Contains the 3' end of the Gas7 gene for growth arrest specific 7, the Rcvrn gene for recoverin, the Glp2r gene for glucagon-like peptide 2 receptor, a novel gene and the gene for a novel protein (1110001P11Rik), complete sequence Length = 212636 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 atcacacccacacacgcacatgcat 189 ||||||| ||||||||||||||||| Sbjct: 65838 atcacactcacacacgcacatgcat 65862
>emb|BX465211.8| Zebrafish DNA sequence from clone CH211-142D23 in linkage group 17, complete sequence Length = 173690 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 169 cacccacacacgcacatgcat 189 ||||||||||||||||||||| Sbjct: 29672 cacccacacacgcacatgcat 29692
>gb|AC005719.2|AC005719 Drosophila melanogaster, chromosome 2L, region 38A5-38B4, BAC clone BACR48M05, complete sequence Length = 188341 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatgcatcc 191 ||||| ||||||||||||||||||| Sbjct: 96536 cacacacacacacgcacatgcatcc 96512
>gb|AC116620.6| Homo sapiens BAC clone RP11-261I22 from 2, complete sequence Length = 62301 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 164 catcacacccacacacgcacatgca 188 |||||||| |||||||||||||||| Sbjct: 25485 catcacacacacacacgcacatgca 25509
>gb|AE003664.3| Drosophila melanogaster chromosome 2L, section 73 of 83 of the complete sequence Length = 266287 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgcatcc 191 ||||| ||||||||||||||||||| Sbjct: 113971 cacacacacacacgcacatgcatcc 113995
>gb|L16798.1|MZECHITINA Zea mays class I acidic chitinase mRNA, partial cds Length = 1012 Score = 42.1 bits (21), Expect = 1.3 Identities = 90/113 (79%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| | ||||||| |||||| | |||||| ||||||| || Sbjct: 776 tggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtagctggtg 717 Query: 313 tagaacccgatccggtcggccaccttgtcgttctgccccttgccgcattcgat 365 ||||| | |||||| ||||||||| ||||| | || |||||||| ||||| Sbjct: 716 tagaagaaggtccggttggccaccttctcgttgtagcctttgccgcactcgat 664
>gb|AC120437.7| Mus musculus chromosome 5, clone RP24-571K14, complete sequence Length = 147493 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 37118 cacccacacacgcacatgca 37137
>ref|NM_197598.1| Oryza sativa (japonica cultivar-group) putative chitinase (OSJNBb0015I11.16), mRNA Length = 891 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggtt 272 |||||||||||||||||||| Sbjct: 863 tggttgtagcagtcgaggtt 844 Score = 40.1 bits (20), Expect = 5.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 295 atgtcacagtagcgcttgtagaacccgatccggtcg 330 ||||| ||||||||||||||| | ||||| |||||| Sbjct: 821 atgtcgcagtagcgcttgtagtagccgatgcggtcg 786
>gb|AC120004.14| Mus musculus chromosome 5, clone RP24-150N15, complete sequence Length = 199229 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 53058 cacccacacacgcacatgca 53039
>gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence Length = 187098 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ccatttatttggtcataaaa 132 |||||||||||||||||||| Sbjct: 13104 ccatttatttggtcataaaa 13085
>gb|AC127756.4| Rattus norvegicus 16 BAC CH230-166D23 (Children's Hospital Oakland Research Institute) complete sequence Length = 176794 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 tcacacccacacacgcacatgcatccat 193 |||||| ||||||| ||||||||||||| Sbjct: 169355 tcacacacacacacacacatgcatccat 169382
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence Length = 236084 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 37637 cacccacacacgcacatgca 37656
>gb|AC167241.2| Mus musculus BAC clone RP24-560M14 from chromosome 17, complete sequence Length = 184079 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 78422 cacacgcacacacgcacatgcatgcatg 78449
>gb|AC165263.2| Mus musculus BAC clone RP23-21E23 from chromosome 13, complete sequence Length = 180505 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 136012 cacacacacacacgcacatgcatgcatg 135985
>emb|BX901895.15| Zebrafish DNA sequence from clone CH211-218C11 in linkage group 7, complete sequence Length = 208436 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 aatatgtttataataaaagg 31 |||||||||||||||||||| Sbjct: 125720 aatatgtttataataaaagg 125739
>emb|CR931785.6| Zebrafish DNA sequence from clone DKEY-230N5 in linkage group 7, complete sequence Length = 196531 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 aatatgtttataataaaagg 31 |||||||||||||||||||| Sbjct: 145929 aatatgtttataataaaagg 145948
>gb|AC122466.2| Mus musculus BAC clone RP24-304N8 from chromosome 5, complete sequence Length = 196687 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 48737 cacccacacacgcacatgca 48718
>gb|AC121591.4| Mus musculus BAC clone RP23-289H3 from 1, complete sequence Length = 195393 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ccatttatttggtcataaaa 132 |||||||||||||||||||| Sbjct: 12989 ccatttatttggtcataaaa 13008
>ref|XM_859883.1| PREDICTED: Canis familiaris similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2), transcript variant 5 (LOC609835), mRNA Length = 3525 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 catcacacccacacacgcac 183 |||||||||||||||||||| Sbjct: 415 catcacacccacacacgcac 434
>ref|XM_846983.1| PREDICTED: Canis familiaris similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2), transcript variant 1 (LOC609835), mRNA Length = 3661 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 catcacacccacacacgcac 183 |||||||||||||||||||| Sbjct: 551 catcacacccacacacgcac 570
>ref|XM_859847.1| PREDICTED: Canis familiaris similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2), transcript variant 4 (LOC609835), mRNA Length = 3568 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 catcacacccacacacgcac 183 |||||||||||||||||||| Sbjct: 551 catcacacccacacacgcac 570
>ref|XM_859828.1| PREDICTED: Canis familiaris similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2), transcript variant 3 (LOC609835), mRNA Length = 3530 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 catcacacccacacacgcac 183 |||||||||||||||||||| Sbjct: 551 catcacacccacacacgcac 570
>ref|XM_859806.1| PREDICTED: Canis familiaris similar to Protein tyrosine phosphatase type IVA protein 2 (Protein-tyrosine phosphatase 4a2) (Protein-tyrosine phosphatase of regenerating liver-2) (PRL-2), transcript variant 2 (LOC609835), mRNA Length = 3586 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 catcacacccacacacgcac 183 |||||||||||||||||||| Sbjct: 551 catcacacccacacacgcac 570
>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082 Length = 340000 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 3522 cacccacacacgcacatgca 3503
>gb|AC122574.7| Rattus norvegicus 7 BAC CH230-134L8 (Children's Hospital Oakland Research Institute) complete sequence Length = 54870 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 45118 cacacgcacacacgcacatgcatacatg 45145
>emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chromosome 13, complete sequence Length = 236130 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 ccaagattatttatttgtgg 158 |||||||||||||||||||| Sbjct: 200200 ccaagattatttatttgtgg 200219
>gb|AC167968.5| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940121D9, complete sequence Length = 108830 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 gccgcattcgatcccgccattgatgacg 381 |||||| ||||| ||||||||||||||| Sbjct: 73169 gccgcactcgatgccgccattgatgacg 73196
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cccgtagccgatgccgaaga 295 |||||||||||||||||||| Sbjct: 399928 cccgtagccgatgccgaaga 399947
>emb|X63899.1|PSCHITIN P.sativum mRNA for chitinase Length = 1143 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 gccgcattcgatcccgccattgat 377 ||||||||| |||||||||||||| Sbjct: 879 gccgcattcaatcccgccattgat 856
>gb|AC155648.14| Mus musculus 6 BAC RP24-88B16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 199446 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 atcacacccacacacgcacatgca 188 ||||||| |||||||||||||||| Sbjct: 48824 atcacacacacacacgcacatgca 48847
>emb|AL591420.5| Zebrafish DNA sequence from clone BUSM1-221H6 in linkage group 7 Contains three genes for novel immune-type receptors (nitr), complete sequence Length = 51019 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aatatgtttataataaaagg 31 |||||||||||||||||||| Sbjct: 25542 aatatgtttataataaaagg 25523
>emb|CR376829.10| Zebrafish DNA sequence from clone CH211-218I18 in linkage group 8, complete sequence Length = 197983 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 32692 cacacacacacacgcacatgcatgcatg 32665
>gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164252 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatg 186 |||||||||||||||||||| Sbjct: 13710 cacacccacacacgcacatg 13691
>dbj|AK086752.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930049G22 product:hypothetical protein, full insert sequence Length = 2085 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 165 atcacacccacacacgcacatgca 188 ||||||| |||||||||||||||| Sbjct: 1294 atcacacacacacacgcacatgca 1317
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 cgatccggtcggccaccttg 339 |||||||||||||||||||| Sbjct: 6660758 cgatccggtcggccaccttg 6660777
>emb|AL954849.14| Zebrafish DNA sequence from clone DKEY-7N10 in linkage group 7, complete sequence Length = 162939 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aatatgtttataataaaagg 31 |||||||||||||||||||| Sbjct: 25634 aatatgtttataataaaagg 25615
>gb|AY111529.1| Zea mays CL2382_1 mRNA sequence Length = 990 Score = 40.1 bits (20), Expect = 5.1 Identities = 74/92 (80%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggttattcccgtagccgatgccgaagatgtcacagtagcgcttg 312 |||||||||||||| | ||| | ||||||| |||||| | |||||| ||||||| || Sbjct: 732 tggttgtagcagtccaagttgtcgccgtagctgatgccaaggatgtcgcagtagctggtg 673 Query: 313 tagaacccgatccggtcggccaccttgtcgtt 344 ||||| | |||||| ||||||||| ||||| Sbjct: 672 tagaagaaggtccggttggccaccttctcgtt 641
>emb|AL954231.3|PTB144O12 Pan troglodytes chromosome 22 BAC PTB-144O12, complete sequence Length = 180638 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 73665 cacccacacacgcacatgca 73646
>emb|AL954232.2|RP43039B12 Pan troglodytes chromosome 22 BAC RP43-039B12, complete sequence Length = 201761 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 81876 cacccacacacgcacatgca 81857
>emb|AL954230.2|RP43035C13 Pan troglodytes chromosome 22 BAC RP43-035C13, complete sequence Length = 157305 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 115446 cacccacacacgcacatgca 115427
>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete sequence Length = 308311 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatg 186 |||||||||||||||||||| Sbjct: 125030 cacacccacacacgcacatg 125011
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 cgatccggtcggccaccttg 339 |||||||||||||||||||| Sbjct: 1773332 cgatccggtcggccaccttg 1773313
>gb|AC134566.5| Mus musculus BAC clone RP24-196G8 from 3, complete sequence Length = 147839 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 acccacacacgcacatgcatccat 193 |||||||||| ||||||||||||| Sbjct: 18934 acccacacacacacatgcatccat 18957
>gb|AC154211.1| Mus musculus BAC clone RP24-113P8 from 17, complete sequence Length = 146732 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 106833 cacacacacacacgcacatgcatgcatg 106860
>gb|AF064865.1|AF064865 Homo sapiens chromosome 21q22.3 PAC 58D10, complete sequence Length = 159424 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 cacccacacacgcacatgca 188 |||||||||||||||||||| Sbjct: 107155 cacccacacacgcacatgca 107136
>gb|AC124011.4| Mus musculus BAC clone RP23-218I3 from 9, complete sequence Length = 208088 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 39089 cacacacacacacgcacatgcatgcatg 39116
>gb|AC170884.3| Mus musculus BAC clone RP24-111L17 from chromosome 17, complete sequence Length = 180189 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 11555 cacacgcacacacgcacatgcatgcatg 11582
>gb|L37876.1|PEACHI2I Pisum sativum chitinase class I (chi2) gene, complete cds Length = 1670 Score = 40.1 bits (20), Expect = 5.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 295 atgtcacagtagcgcttgtagaacccgatccg 326 ||||||||||| | |||||| ||||||||||| Sbjct: 1137 atgtcacagtatctcttgtaaaacccgatccg 1106
>emb|AL663064.12| Mouse DNA sequence from clone RP23-12F1 on chromosome X, complete sequence Length = 220522 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 agattatttatttgtgggtg 161 |||||||||||||||||||| Sbjct: 154398 agattatttatttgtgggtg 154417
>emb|AL355887.4|CNS05TCY Human chromosome 14 DNA sequence BAC R-179O11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 159183 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cacacacgcacatgcatccatgga 196 ||||||| |||||||||||||||| Sbjct: 105774 cacacacacacatgcatccatgga 105797
>emb|AL031640.1|DMC114D9 Drosophila melanogaster cosmid clone 114D9 Length = 30168 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatg 186 |||||||||||||||||||| Sbjct: 13826 cacacccacacacgcacatg 13807
>gb|U02286.1|OSU02286 Oryza sativa IR58 chitinase mRNA, complete cds Length = 1051 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 tggttgtagcagtcgaggtt 272 |||||||||||||||||||| Sbjct: 975 tggttgtagcagtcgaggtt 956
>emb|AL845552.2|CNS08CBB Human chromosome 14 DNA sequence BAC C-2062F14 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 130569 Score = 40.1 bits (20), Expect = 5.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 167 cacacccacacacgcacatgcatccatg 194 ||||| ||||||||||||||||| |||| Sbjct: 103577 cacacacacacacgcacatgcatgcatg 103550 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,507,415 Number of Sequences: 3902068 Number of extensions: 3507415 Number of successful extensions: 109247 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 108714 Number of HSP's gapped (non-prelim): 520 length of query: 381 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 359 effective length of database: 17,147,199,772 effective search space: 6155844718148 effective search space used: 6155844718148 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
