>gb|BT017018.1| Zea mays clone EK07D2312B04.c mRNA sequence
          Length = 1095

 Score =  153 bits (77), Expect = 5e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 250 tcgtacaggggctttggctccagatctatgaattcgttcgagttgtttgccagatgtgat 309
           |||||| ||| ||| ||||||||||| ||||| | ||| |||||||| ||||||||||||
Sbjct: 855 tcgtactgggccttcggctccagatcgatgaactggtttgagttgttggccagatgtgat 796

                                                                       
Query: 310 atgctcaccctcccatgcttcctgatgtagtctgcaacagcctgcatctcctcaattgat 369
           |||||||| ||||| |||||||| ||||| |||||||| |||| |||||| ||| | || 
Sbjct: 795 atgctcactctcccttgcttcctcatgtactctgcaactgccttcatctcttcagtggag 736

                                                    
Query: 370 atgtatatgaactttccacggtcatccatcacgccagataa 410
           ||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 735 atgtagatgaacttcccacggtcatccatcacaccagataa 695

>gb|AY106392.1| Zea mays PCO096998 mRNA sequence
          Length = 442

 Score =  153 bits (77), Expect = 5e-34
 Identities = 140/161 (86%)
 Strand = Plus / Minus

                                                                       
Query: 250 tcgtacaggggctttggctccagatctatgaattcgttcgagttgtttgccagatgtgat 309
           |||||| ||| ||| ||||||| ||| ||||| | ||| |||||||| ||||||||||||
Sbjct: 170 tcgtactgggccttcggctccaaatcgatgaactggtttgagttgttggccagatgtgat 111

                                                                       
Query: 310 atgctcaccctcccatgcttcctgatgtagtctgcaacagcctgcatctcctcaattgat 369
           |||||||| ||||| |||||||||||||| |||||||| |||| |||||| ||| | || 
Sbjct: 110 atgctcactctcccttgcttcctgatgtactctgcaactgccttcatctcttcagtggag 51

                                                    
Query: 370 atgtatatgaactttccacggtcatccatcacgccagataa 410
           ||||| |||||||| ||||||||||||||||| ||||||||
Sbjct: 50  atgtagatgaacttcccacggtcatccatcacaccagataa 10

>ref|NM_194214.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score =  143 bits (72), Expect = 5e-31
 Identities = 141/164 (85%)
 Strand = Plus / Minus

                                                                       
Query: 246 ctcatcgtacaggggctttggctccagatctatgaattcgttcgagttgtttgccagatg 305
           ||||| |||| ||||||||||||||| ||| || ||||  || |||||  | |||| |||
Sbjct: 864 ctcattgtactggggctttggctccaaatcaataaattgatttgagttactggccaaatg 805

                                                                       
Query: 306 tgatatgctcaccctcccatgcttcctgatgtagtctgcaacagcctgcatctcctcaat 365
           |||||||||||||||||| || ||||||||||| ||||| ||||||| |||||||||| |
Sbjct: 804 tgatatgctcaccctcccttgtttcctgatgtaatctgcgacagccttcatctcctcagt 745

                                                       
Query: 366 tgatatgtatatgaactttccacggtcatccatcacgccagata 409
            ||||||||||||||||| ||||| |||||||| || |||||||
Sbjct: 744 agatatgtatatgaacttcccacgatcatccatgacaccagata 701

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score =  143 bits (72), Expect = 5e-31
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                          
Query: 246    ctcatcgtacaggggctttggctccagatctatgaattcgttcgagttgtttgccagatg 305
              ||||| |||| ||||||||||||||| ||| || ||||  || |||||  | |||| |||
Sbjct: 195924 ctcattgtactggggctttggctccaaatcaataaattgatttgagttactggccaaatg 195983

                                                                          
Query: 306    tgatatgctcaccctcccatgcttcctgatgtagtctgcaacagcctgcatctcctcaat 365
              |||||||||||||||||| || ||||||||||| ||||| ||||||| |||||||||| |
Sbjct: 195984 tgatatgctcaccctcccttgtttcctgatgtaatctgcgacagccttcatctcctcagt 196043

                                                          
Query: 366    tgatatgtatatgaactttccacggtcatccatcacgccagata 409
               ||||||||||||||||| ||||| |||||||| || |||||||
Sbjct: 196044 agatatgtatatgaacttcccacgatcatccatgacaccagata 196087

>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0446F04
          Length = 175390

 Score =  143 bits (72), Expect = 5e-31
 Identities = 141/164 (85%)
 Strand = Plus / Plus

                                                                         
Query: 246   ctcatcgtacaggggctttggctccagatctatgaattcgttcgagttgtttgccagatg 305
             ||||| |||| ||||||||||||||| ||| || ||||  || |||||  | |||| |||
Sbjct: 30788 ctcattgtactggggctttggctccaaatcaataaattgatttgagttactggccaaatg 30847

                                                                         
Query: 306   tgatatgctcaccctcccatgcttcctgatgtagtctgcaacagcctgcatctcctcaat 365
             |||||||||||||||||| || ||||||||||| ||||| ||||||| |||||||||| |
Sbjct: 30848 tgatatgctcaccctcccttgtttcctgatgtaatctgcgacagccttcatctcctcagt 30907

                                                         
Query: 366   tgatatgtatatgaactttccacggtcatccatcacgccagata 409
              ||||||||||||||||| ||||| |||||||| || |||||||
Sbjct: 30908 agatatgtatatgaacttcccacgatcatccatgacaccagata 30951

>gb|AC144822.2| Danio rerio clone CH211-13O4, complete sequence
          Length = 164460

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 6      cagttctgaatttcccatgatg 27
              ||||||||||||||||||||||
Sbjct: 160142 cagttctgaatttcccatgatg 160163

>emb|AL845513.9| Zebrafish DNA sequence from clone CH211-13O4 in linkage group 16,
            complete sequence
          Length = 164117

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 6    cagttctgaatttcccatgatg 27
            ||||||||||||||||||||||
Sbjct: 4307 cagttctgaatttcccatgatg 4286

>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10,
             complete sequence
          Length = 143073

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 58    gatgccaagccgccaccgagg 78
             |||||||||||||||||||||
Sbjct: 88570 gatgccaagccgccaccgagg 88590

>gb|AY313718.1| Limnonectes macrocephalus specimen_voucher FMNH259268 tRNA-Phe gene,
            partial sequence; 12S ribosomal RNA and tRNA-Val genes,
            complete sequence; and 16S ribosomal RNA gene, partial
            sequence; mitochondrial genes for mitochondrial products
          Length = 2425

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 88   actataataacatccctagaaaaca 112
            ||||||||||||| |||||||||||
Sbjct: 1753 actataataacatacctagaaaaca 1777

>gb|AC083836.6| Homo sapiens, clone RP11-90D11, complete sequence
          Length = 173428

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 305    gtgatatgctcaccctcccat 325
              |||||||||||||||||||||
Sbjct: 113085 gtgatatgctcaccctcccat 113105

>gb|AC024995.8| Homo sapiens, clone RP11-328L11, complete sequence
          Length = 171873

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 305   gtgatatgctcaccctcccat 325
             |||||||||||||||||||||
Sbjct: 13637 gtgatatgctcaccctcccat 13657

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 58       gatgccaagccgccaccgagg 78
                |||||||||||||||||||||
Sbjct: 25448209 gatgccaagccgccaccgagg 25448229

>dbj|AP004220.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1483D9
          Length = 162604

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 305   gtgatatgctcaccctcccat 325
             |||||||||||||||||||||
Sbjct: 55344 gtgatatgctcaccctcccat 55324

>emb|AL590552.12| Human DNA sequence from clone RP11-374N7 on chromosome 6 Contains a
             thioredoxin (TXN) pseudogene and the 5' end of a novel
             gene, complete sequence
          Length = 144802

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   gaaattaaaatgatagatgc 150
             ||||||||||||||||||||
Sbjct: 25647 gaaattaaaatgatagatgc 25628

>emb|BX571715.10| Zebrafish DNA sequence from clone DKEY-6E3 in linkage group 3, complete
             sequence
          Length = 141705

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    taaccctttctcatcttgta 50
             ||||||||||||||||||||
Sbjct: 62225 taaccctttctcatcttgta 62206

>emb|BX649368.5| Zebrafish DNA sequence from clone CH211-191A16 in linkage group 15,
              complete sequence
          Length = 147849

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    tcctcaattgatatgtatat 377
              ||||||||||||||||||||
Sbjct: 110536 tcctcaattgatatgtatat 110517

>gb|AC114785.5| Homo sapiens BAC clone RP11-607G14 from 2, complete sequence
          Length = 118022

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 383   ttccacggtcatccatcacgccag 406
             |||||| |||||||||||||||||
Sbjct: 22582 ttccaccgtcatccatcacgccag 22605

>gb|AC068718.6| Homo sapiens BAC clone RP11-123G24 from 2, complete sequence
          Length = 161955

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    agaaattaaaatgatagatg 149
              ||||||||||||||||||||
Sbjct: 119061 agaaattaaaatgatagatg 119080

>gb|AC154366.2| Mus musculus BAC clone RP24-567I24 from 17, complete sequence
          Length = 147597

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tcttgcacagaaattaaaat 141
             ||||||||||||||||||||
Sbjct: 34764 tcttgcacagaaattaaaat 34783

>gb|AC133209.4| Mus musculus BAC clone RP23-21E5 from chromosome 3, complete sequence
          Length = 164837

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 126    gcacagaaattaaaatgata 145
              ||||||||||||||||||||
Sbjct: 113568 gcacagaaattaaaatgata 113549


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,771,135
Number of Sequences: 3902068
Number of extensions: 3771135
Number of successful extensions: 68990
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68918
Number of HSP's gapped (non-prelim): 72
length of query: 412
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 390
effective length of database: 17,147,199,772
effective search space: 6687407911080
effective search space used: 6687407911080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)