>ZN200_HUMAN (P98182) Zinc finger protein 200|
          Length = 394

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +3

Query: 279 SSSPCG-GFRRRSHVALHEGLHLLENL 356
           S S CG  FR+ SH + HEG+H+ E +
Sbjct: 308 SCSQCGKNFRQNSHRSRHEGIHIREKI 334

>IL1B_RABIT (P14628) Interleukin-1 beta precursor (IL-1 beta) (Lymphocyte|
           proliferation potentiating factor)
          Length = 268

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -3

Query: 221 VLCSVITDYNVSCETVRSLH 162
           VLC+   DY++ C+ VRSLH
Sbjct: 103 VLCNTWDDYSLECDAVRSLH 122

>HIW_DROME (Q9NB71) Ubiquitin ligase protein highwire (EC 6.3.2.-) (Protein|
            pam/highwire/rpm-1)
          Length = 5233

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +3

Query: 192  IVISDHTTQNTMIKSTNLIFEPLVPWITASSSP-CGGFRRRSHVAL 326
            +V SDH  ++  I S  + F P V W+T    P CG  +   ++ L
Sbjct: 2507 VVESDHPYKSASISSYRVEFPPCVQWLTIEFDPQCGTAQLEDYLLL 2552

>ZN330_DROME (Q9VAU9) Zinc finger protein 330 homolog (Nucleolar autoantigen 36|
           homolog)
          Length = 315

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -3

Query: 233 FDHCVLCSVITDYNVSCETVRSLHEYVCLSSR---CEGWTEKYSF 108
           F+H   C V+   N  C++   L +Y CL  +   CE    +  F
Sbjct: 157 FEHQASCQVLESENYKCQSCNKLGQYSCLRCKTCYCEDHVRRKGF 201

>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-4) (Irregular xylem protein 5)
           (AtIRX5)
          Length = 1049

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -3

Query: 83  REKITFTCKPSWICLC 36
           R+K+T  C PSWIC C
Sbjct: 592 RKKMTCDCWPSWICCC 607

>ZNF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96)|
          Length = 501

 Score = 26.2 bits (56), Expect(2) = 3.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 140 SSLNKHIRARSGQSHNSHCNQ 202
           S+LN+H R  SG+ H  HCN+
Sbjct: 338 SALNQHQRLHSGEKH-YHCNE 357



 Score = 21.2 bits (43), Expect(2) = 3.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 300 FRRRSHVALHEGLH 341
           F RRS ++ H+G+H
Sbjct: 390 FNRRSTLSQHQGVH 403

>KLHL6_HUMAN (Q8WZ60) Kelch-like protein 6|
          Length = 610

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/63 (23%), Positives = 29/63 (46%)
 Frame = +3

Query: 57  FACERYLFSISLVLSDHEAIFFCPSLTSRA*TNIFVQGADSLTTHIVISDHTTQNTMIKS 236
           F+C R + + +   S++    FC  L  +    I ++G D+ T H ++    T   +I  
Sbjct: 72  FSCHRVVLAAA---SNYFRAMFCNDLKEKYEKRIIIKGVDAETMHTLLDYTYTSKALITK 128

Query: 237 TNL 245
            N+
Sbjct: 129 QNV 131

>GATB_BOMMO (P52167) Transcription factor BCFI (GATA-beta) (BmGATA-beta)|
          Length = 508

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = -1

Query: 328 WRATWLRRRNPP 293
           WRA W+RRR+PP
Sbjct: 397 WRAYWMRRRSPP 408

>CD276_XENLA (Q68EV1) CD276 antigen homolog precursor|
          Length = 308

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +3

Query: 153 NIFVQGADSLTTHI---VISDHTTQNTMIKSTNLIFEPLVPWITASSSPC 293
           ++ ++ +D+ T  +   V+ D T  +  +   +L F PLV W+T   S C
Sbjct: 199 SVILETSDTYTCLVFNPVLQDVTHASLTVTGQHLSFPPLVLWVTVGLSIC 248

>NUOH_BUCAI (P57258) NADH-quinone oxidoreductase chain H (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain H) (NDH-1, chain H)
          Length = 322

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 50  WICLCLWFVLILIFF 6
           WI  C+WF+L +IFF
Sbjct: 264 WIPSCIWFILKIIFF 278

>DLDH2_BACSU (P54533) Dihydrolipoyl dehydrogenase (EC 1.8.1.4) (E3 component of|
           branched-chain alpha-keto acid dehydrogenase complex)
           (LPD-Val) (Dihydrolipoamide dehydrogenase)
          Length = 474

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 20/56 (35%), Positives = 30/56 (53%)
 Frame = +3

Query: 201 SDHTTQNTMIKSTNLIFEPLVPWITASSSPCGGFRRRSHVALHEGLHLLENLAGVS 368
           +D  T+N MI S N   +     I A     GG +  +HVA HEG+  +E+ AG++
Sbjct: 293 TDIVTENGMI-SVNESCQTKESHIYAIGDVIGGLQL-AHVASHEGIIAVEHFAGLN 346

>IFH1_YEAST (P39520) Protein IFH1 (Protein RRP3)|
          Length = 1085

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 149 NKHIRARSGQSHNSHCNQ*SHYTKHNDQINKSYFRT 256
           +K  R +SG+SH  H N+ S+  K ND +  S   T
Sbjct: 515 SKKGRHKSGKSHIEHKNKGSNLIKSNDDLEPSTHST 550

>IL3RB_MOUSE (P26955) Cytokine receptor common beta chain precursor|
           (GM-CSF/IL-3/IL-5 receptor common beta-chain) (CD131
           antigen)
          Length = 896

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 68  FTCKPSWICLCLWFVLILIF 9
           +T K  W+   LW VLIL+F
Sbjct: 435 YTWKTDWVMPTLWIVLILVF 454

>ZN583_MOUSE (Q3V080) Zinc finger protein 583|
          Length = 568

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 300 FRRRSHVALHEGLHLLENLAGVS 368
           FR+R+H+A HE +H +E+   +S
Sbjct: 528 FRQRAHLAHHEKVHTMESFLSLS 550

>DOT6_YEAST (P40059) Disrupter of telomere silencing protein 6|
          Length = 670

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
 Frame = +2

Query: 110 SYIFLSIPHISSLNK----HIRAR---SGQSHNSHCNQ*SHYTKHNDQI 235
           SY F+ +PH SS++     H   R   SG S  S CN  + ++K  D +
Sbjct: 398 SYTFMDLPHSSSVSSSSTLHKSKRGSFSGHSMKSSCNPTNLWSKDEDAL 446


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,842,886
Number of Sequences: 219361
Number of extensions: 966554
Number of successful extensions: 2642
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2642
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)