ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59f04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HUTG_FUSNN (Q8RFN0) Formimidoylglutamase (EC 3.5.3.8) (Formimino... 35 0.064
2O5AK2_HUMAN (Q8NH90) Olfactory receptor 5AK2 30 1.2
3O5AK3_HUMAN (Q8NH89) Olfactory receptor 5AK3 30 2.0
4HIS8_SHIBS (Q323J1) Histidinol-phosphate aminotransferase (EC 2.... 28 4.6
5IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2) 28 4.6
6Y813_PROAC (Q6A9J7) UPF0042 protein PPA0813 28 6.0
7CLIC3_MOUSE (Q9D7P7) Chloride intracellular channel protein 3 28 7.8
8ENP1_MOUSE (P55772) Ectonucleoside triphosphate diphosphohydrola... 28 7.8
9S17A5_HUMAN (Q9NRA2) Sialin (Solute carrier family 17 member 5) ... 28 7.8

>HUTG_FUSNN (Q8RFN0) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)|
           (Formiminoglutamate hydrolase)
          Length = 318

 Score = 34.7 bits (78), Expect = 0.064
 Identities = 21/66 (31%), Positives = 36/66 (54%)
 Frame = +2

Query: 44  IEQNLLLQFTICGTTWHSTPKTGYSTPKTNYLWYFESTGSILGSISKGYIRTLKNQTIIL 223
           +E+N  +  TIC   +H T   G S P+T  +W  ++ G +L +I+K    T KN T+ +
Sbjct: 230 LERNDYIHLTICTDVFHITCAPGVSAPQTFGIWPNQAIG-LLNTIAK----TKKNLTLEV 284

Query: 224 VSRTPK 241
              +P+
Sbjct: 285 AEISPR 290



to top

>O5AK2_HUMAN (Q8NH90) Olfactory receptor 5AK2|
          Length = 309

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 18/69 (26%), Positives = 30/69 (43%)
 Frame = -2

Query: 229 AYQYYRLVFQSPDISFGYRT*YGTCALKIP*VVCFWGRISCFWS*MPSGTAYRKLEQQVL 50
           +Y Y          S G +  + TCA  +  V  F+G +S  +    S  +   ++   +
Sbjct: 217 SYIYIMATILKMSSSAGRKKSFSTCASHLTAVTIFYGTLSYMYLQSHSNNSQENMKVAFI 276

Query: 49  FYGPVIWLL 23
           FYG VI +L
Sbjct: 277 FYGTVIPML 285



to top

>O5AK3_HUMAN (Q8NH89) Olfactory receptor 5AK3|
          Length = 298

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 17/69 (24%), Positives = 31/69 (44%)
 Frame = -2

Query: 229 AYQYYRLVFQSPDISFGYRT*YGTCALKIP*VVCFWGRISCFWS*MPSGTAYRKLEQQVL 50
           +Y Y  +       + G +  + TCA  +  V  F+G +S  +    S  +   ++   +
Sbjct: 217 SYIYIMVTILKMSSTAGRKKSFSTCASHLTAVTIFYGTLSYMYLQPQSNNSQENMKVASI 276

Query: 49  FYGPVIWLL 23
           FYG VI +L
Sbjct: 277 FYGTVIPML 285



to top

>HIS8_SHIBS (Q323J1) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 356

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 174 EPSMEPVLSKYHR*FVFGVEYPVFGVECQVVPHIVNW 64
           EP  + +L       ++GV     GVEC+ VP + NW
Sbjct: 97  EPGKDAILYCPPTYGMYGVSAETIGVECRTVPTLDNW 133



to top

>IRS2_HUMAN (Q9Y4H2) Insulin receptor substrate 2 (IRS-2)|
          Length = 1338

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = +2

Query: 17  PL*QPNYRTIEQNLLLQFTICGTTWHSTPKTGYSTPKTNYLWYFESTGSI 166
           P+ QP+  ++++  L++ T  G+     P    S+PK  Y  Y E  G I
Sbjct: 586 PVPQPSSASLDEYTLMRATFSGSAGRLCPSCPASSPKVAYHPYPEDYGDI 635



to top

>Y813_PROAC (Q6A9J7) UPF0042 protein PPA0813|
          Length = 291

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
 Frame = +2

Query: 101 PKTGYSTPKTNYLW-------YFESTGSILGSISKGYIRTLKNQTIILVSRT 235
           PKTG S+   +Y+        + +    +LG ++ GY+R  K Q  + V  T
Sbjct: 206 PKTGLSSDVASYVMAQAGATEFIDRVEQLLGGMAPGYLREGKKQVTVAVGCT 257



to top

>CLIC3_MOUSE (Q9D7P7) Chloride intracellular channel protein 3|
          Length = 237

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -3

Query: 186 PLDIEPSMEPVLSKYHR*FVFGVEYPVFGVECQVVP--HIVN 67
           PLD E + EP L + HR F+ G ++ +   +C ++P  HIV+
Sbjct: 146 PLDHELAQEPHLRESHRRFLDGDQFTL--ADCSLLPKLHIVD 185



to top

>ENP1_MOUSE (P55772) Ectonucleoside triphosphate diphosphohydrolase 1 (EC|
           3.6.1.5) (NTPDase1) (Ecto-ATP diphosphohydrolase)
           (ATPDase) (Lymphoid cell activation antigen)
           (Ecto-apyrase) (CD39 antigen)
          Length = 510

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +2

Query: 44  IEQNLLLQFT--ICGTTWHSTPKTGYSTPKTNYLWYFESTGSILGSISKGY 190
           I Q  + + T   C  +W  T KT Y + K  YL  +  +G+ + S+ +GY
Sbjct: 378 ISQEKMTEITKNFCSKSWEET-KTSYPSVKEKYLSEYCFSGAYILSLLQGY 427



to top

>S17A5_HUMAN (Q9NRA2) Sialin (Solute carrier family 17 member 5) (Sodium/sialic|
           acid cotransporter) (AST) (Membrane glycoprotein HP59)
          Length = 495

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 92  HSTP-KTGYSTPKTNYLWYFESTGSILGSISKGYIRT 199
           HS P K  ++     Y W  E+ G ILGS   GYI T
Sbjct: 86  HSAPIKVHHNQTGKKYQWDAETQGWILGSFFYGYIIT 122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,167,749
Number of Sequences: 219361
Number of extensions: 1049199
Number of successful extensions: 2452
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2452
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top