>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 90/106 (84%), Gaps = 7/106 (6%)
 Strand = Plus / Plus

                                                                           
Query: 7       agattacgacgattttattcaggttcgctgccccttgcagcgattcggactacagacgct 66
               |||||| |||||||| |||||||||| ||| ||| |||||||| | ||||||||||| ||
Sbjct: 9850097 agattatgacgattt-attcaggttcactgtcccctgcagcgact-ggactacagacact 9850154

                                                             
Query: 67      tggtaaaa----gggtttaccactg-aaaatacgttggtaaacgag 107
               ||| ||||    |||||||||| || |||||||| |||||||||||
Sbjct: 9850155 tggaaaaagaaggggtttaccattgaaaaatacgctggtaaacgag 9850200

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 90/106 (84%), Gaps = 7/106 (6%)
 Strand = Plus / Plus

                                                                           
Query: 7       agattacgacgattttattcaggttcgctgccccttgcagcgattcggactacagacgct 66
               |||||| |||||||| |||||||||| ||| ||| |||||||| | ||||||||||| ||
Sbjct: 9848218 agattatgacgattt-attcaggttcactgtcccctgcagcgact-ggactacagacact 9848275

                                                             
Query: 67      tggtaaaa----gggtttaccactg-aaaatacgttggtaaacgag 107
               ||| ||||    |||||||||| || |||||||| |||||||||||
Sbjct: 9848276 tggaaaaagaaggggtttaccattgaaaaatacgctggtaaacgag 9848321

>gb|AC137074.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0022M22, from chromosome 3, complete sequence
          Length = 124166

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 90/106 (84%), Gaps = 7/106 (6%)
 Strand = Plus / Plus

                                                                         
Query: 7     agattacgacgattttattcaggttcgctgccccttgcagcgattcggactacagacgct 66
             |||||| |||||||| |||||||||| ||| ||| |||||||| | ||||||||||| ||
Sbjct: 12486 agattatgacgattt-attcaggttcactgtcccctgcagcgact-ggactacagacact 12543

                                                           
Query: 67    tggtaaaa----gggtttaccactg-aaaatacgttggtaaacgag 107
             ||| ||||    |||||||||| || |||||||| |||||||||||
Sbjct: 12544 tggaaaaagaaggggtttaccattgaaaaatacgctggtaaacgag 12589

>gb|AC134232.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0013D02, complete sequence
          Length = 131883

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 90/106 (84%), Gaps = 7/106 (6%)
 Strand = Plus / Minus

                                                                         
Query: 7     agattacgacgattttattcaggttcgctgccccttgcagcgattcggactacagacgct 66
             |||||| |||||||| |||||||||| ||| ||| |||||||| | ||||||||||| ||
Sbjct: 24400 agattatgacgattt-attcaggttcactgtcccctgcagcgact-ggactacagacact 24343

                                                           
Query: 67    tggtaaaa----gggtttaccactg-aaaatacgttggtaaacgag 107
             ||| ||||    |||||||||| || |||||||| |||||||||||
Sbjct: 24342 tggaaaaagaaggggtttaccattgaaaaatacgctggtaaacgag 24297

>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full
            insert sequence
          Length = 1377

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 90/106 (84%), Gaps = 7/106 (6%)
 Strand = Plus / Minus

                                                                        
Query: 7    agattacgacgattttattcaggttcgctgccccttgcagcgattcggactacagacgct 66
            |||||| |||||||| |||||||||| ||| ||| |||||||| | ||||||||||| ||
Sbjct: 1371 agattatgacgattt-attcaggttcactgtcccctgcagcgact-ggactacagacact 1314

                                                          
Query: 67   tggtaaaa----gggtttaccactg-aaaatacgttggtaaacgag 107
            ||| ||||    |||||||||| || |||||||| |||||||||||
Sbjct: 1313 tggaaaaagaaggggtttaccattgaaaaatacgctggtaaacgag 1268

>gb|AC132458.3| Mus musculus BAC clone RP23-152C8 from chromosome 5, complete sequence
          Length = 219470

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 282   cttgttataatcagaaagaca 302
             |||||||||||||||||||||
Sbjct: 32113 cttgttataatcagaaagaca 32093

>emb|AL357552.25| Human DNA sequence from clone RP4-633I8 on chromosome 1p36.21-36.32
             Contains the 5' end of the RERE gene for arginine-glutamic
             acid dipeptide (RE) repeats (FLJ38775), two ribosomal
             protein L7 (RPL7) pseudogenes, a ribosomal protein L27
             (RPL27) pseudogene, a novel gene and a CpG island,
             complete sequence
          Length = 143969

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   ttataatcagaaagacagat 305
             ||||||||||||||||||||
Sbjct: 68548 ttataatcagaaagacagat 68529

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 208     aggcggcaaggctggctagaccac 231
               ||||||||||||||||||| ||||
Sbjct: 1091374 aggcggcaaggctggctaggccac 1091397

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 180     gagttagagggaattgaacg 199
               ||||||||||||||||||||
Sbjct: 3968755 gagttagagggaattgaacg 3968736


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,078,801
Number of Sequences: 3902068
Number of extensions: 2078801
Number of successful extensions: 30183
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 30114
Number of HSP's gapped (non-prelim): 64
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)