ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYAB_BORPE (P18770) Cyclolysin secretion/processing ATP-binding ... 29 2.5

>CYAB_BORPE (P18770) Cyclolysin secretion/processing ATP-binding protein cyaB|
           (EC 3.4.22.-)
          Length = 712

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 208 VRPHRPAPAGLPWCPCPEVS 149
           VR HRPAPA LP  P P ++
Sbjct: 60  VRRHRPAPARLPRAPLPAIA 79


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,988,113
Number of Sequences: 219361
Number of extensions: 728151
Number of successful extensions: 1588
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 80,573,946
effective HSP length: 96
effective length of database: 59,515,290
effective search space used: 1428366960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top