ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein 305 2e-80
2gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr... 48 0.009
3emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in... 40 2.3
4gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 2.3
5emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chr... 40 2.3
6emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 40 2.3
7gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, co... 40 2.3
8gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, co... 40 2.3
9gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas... 40 2.3
10gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, co... 40 2.3
11gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, comp... 40 2.3
12gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, co... 40 2.3
13emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chro... 40 2.3
14gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, com... 38 9.1
15gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, com... 38 9.1
16gb|AC169627.2| Mus musculus chromosome 5, clone wi1-232C12, comp... 38 9.1
17gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, comp... 38 9.1
18gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 9.1
19gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome... 38 9.1
20gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CI... 38 9.1
21gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, comp... 38 9.1
22gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, co... 38 9.1
23gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome... 38 9.1
24gb|AC108948.3| Mus musculus BAC clone RP23-183P12 from 15, compl... 38 9.1
25emb|AL353751.13| Human DNA sequence from clone RP11-149I23 on ch... 38 9.1
26gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hos... 38 9.1
27ref|XM_796784.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 38 9.1
28ref|XM_775014.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 38 9.1
29emb|CR628336.1| Legionella pneumophila str. Paris complete genome 38 9.1
30gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, com... 38 9.1
31emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 i... 38 9.1
32gb|AC093419.2| Homo sapiens chromosome 1 clone RP11-135A15, comp... 38 9.1
33gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Par... 38 9.1
34dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
35gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, comp... 38 9.1
36dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
37gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, comple... 38 9.1
38dbj|AB045779.1| Lentinula edodes Le.cyp1 gene for cytochrome P45... 38 9.1
39gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, comp... 38 9.1
40gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, comp... 38 9.1
41gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, comp... 38 9.1
42gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, com... 38 9.1
43gb|AC125455.3| Mus musculus BAC clone RP24-170L2 from chromosome... 38 9.1
44dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
45dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
46dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
47dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic D... 38 9.1
48emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, ... 38 9.1
49emb|AL133240.4|CNS01DUD Human chromosome 14 DNA sequence BAC R-6... 38 9.1
50dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 9.1
51gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, comp... 38 9.1
52gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, comp... 38 9.1
53emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chr... 38 9.1
54gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complet... 38 9.1
55emb|AL121773.5|CNS01DSE Human chromosome 14 DNA sequence BAC R-4... 38 9.1
56gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 38 9.1
57gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, com... 38 9.1
58emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on ch... 38 9.1
59gb|AC034194.5| Homo sapiens chromosome 3 clone RP11-669E3 map 3p... 38 9.1
60gb|AC026204.5| Homo sapiens chromosome 3 clone RP11-590A20 map 3... 38 9.1
61dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 38 9.1
62dbj|AB038653.1| Homo sapiens genomic DNA, chromosome 14q32.1, BA... 38 9.1 
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
          Length = 1020

 Score =  305 bits (154), Expect = 2e-80
 Identities = 154/154 (100%)
 Strand = Plus / Minus

                                                                        
Query: 31   aattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcacc 90
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 aattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcacc 960

                                                                        
Query: 91   acaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaact 150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 959  acaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaact 900

                                              
Query: 151  taaacgactcatgactggaagcaaggggagacgc 184
            ||||||||||||||||||||||||||||||||||
Sbjct: 899  taaacgactcatgactggaagcaaggggagacgc 866
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>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
            complete cds
          Length = 1133

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 61/72 (84%), Gaps = 6/72 (8%)
 Strand = Plus / Minus

                                                                        
Query: 1    caactgaacttgaaattactcggg-----cggacaaattcacaggttttacacaagcaaa 55
            ||||| ||||||||||||||||||     ||| | |||||||| |||||||| |||||||
Sbjct: 1097 caactcaacttgaaattactcgggcgggacgggcgaattcaca-gttttacagaagcaaa 1039

                        
Query: 56   ttgacagggtcg 67
            ||||||| ||||
Sbjct: 1038 ttgacagtgtcg 1027



 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 142 aagcaaacttaaacgactcatg 163
           ||||||||||||||||||||||
Sbjct: 977 aagcaaacttaaacgactcatg 956
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>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
              sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    attcattcattcaaagcaaa 148
              ||||||||||||||||||||
Sbjct: 143356 attcattcattcaaagcaaa 143337
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>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   gatggattcattcattcaaa 143
             ||||||||||||||||||||
Sbjct: 68036 gatggattcattcattcaaa 68017
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>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
             Contains 3' end of the DAB1 gene for disabled homolog 1
             (Drosophila), a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 60856

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gatggattcattcattcaaa 143
             ||||||||||||||||||||
Sbjct: 53885 gatggattcattcattcaaa 53904
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>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   gggatggattcattcattca 141
             ||||||||||||||||||||
Sbjct: 10001 gggatggattcattcattca 10020
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>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence
          Length = 177355

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   aatgggatggattcattcattcaa 142
             |||||||| |||||||||||||||
Sbjct: 47407 aatgggattgattcattcattcaa 47384
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>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence
          Length = 171987

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   aatgggatggattcattcattcaa 142
             |||||||| |||||||||||||||
Sbjct: 31404 aatgggattgattcattcattcaa 31381
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>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aactgaacttgaaattactc 21
             ||||||||||||||||||||
Sbjct: 98129 aactgaacttgaaattactc 98148
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>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence
          Length = 180708

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 119    aatgggatggattcattcattcaa 142
              |||||||| |||||||||||||||
Sbjct: 146597 aatgggattgattcattcattcaa 146620
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>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence
          Length = 132353

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   aatgggatggattcattcattcaa 142
             |||||||| |||||||||||||||
Sbjct: 74998 aatgggattgattcattcattcaa 74975
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>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence
          Length = 194754

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 119    aatgggatggattcattcattcaa 142
              |||||||| |||||||||||||||
Sbjct: 116188 aatgggattgattcattcattcaa 116211
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>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete
             sequence
          Length = 100090

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   attcattcattcaaagcaaa 148
             ||||||||||||||||||||
Sbjct: 53765 attcattcattcaaagcaaa 53784
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>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence
          Length = 235823

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    ggatggattcattcattca 141
              |||||||||||||||||||
Sbjct: 123677 ggatggattcattcattca 123659
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>gb|AC164397.6| Mus musculus chromosome 1, clone RP23-276M15, complete sequence
          Length = 196086

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 163   gactggaagcaaggggaga 181
             |||||||||||||||||||
Sbjct: 55626 gactggaagcaaggggaga 55644
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>gb|AC169627.2| Mus musculus chromosome 5, clone wi1-232C12, complete sequence
          Length = 44799

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     actgaacttgaaattactc 21
             |||||||||||||||||||
Sbjct: 39913 actgaacttgaaattactc 39931
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>gb|AC122782.8| Mus musculus chromosome 5, clone RP24-224N3, complete sequence
          Length = 173643

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     actgaacttgaaattactc 21
             |||||||||||||||||||
Sbjct: 12554 actgaacttgaaattactc 12572
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 43      ttacacaagcaaattgaca 61
               |||||||||||||||||||
Sbjct: 5770706 ttacacaagcaaattgaca 5770724
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>gb|AC160335.6| Mus musculus BAC clone RP23-38N19 from chromosome 15, complete sequence
          Length = 212090

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 159   tcatgactggaagcaaggg 177
             |||||||||||||||||||
Sbjct: 38096 tcatgactggaagcaaggg 38078
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>gb|AC002307.1|HUAC002307 Homo sapiens Chromosome 16 BAC clone CIT987-SK37914  ~complete genomic
              sequence, complete sequence
          Length = 161580

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     attcacaggttttacacaa 50
              |||||||||||||||||||
Sbjct: 123756 attcacaggttttacacaa 123738
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>gb|AC114938.3| Homo sapiens chromosome 16 clone CTD-2244D9, complete sequence
          Length = 166928

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 32   attcacaggttttacacaa 50
            |||||||||||||||||||
Sbjct: 6390 attcacaggttttacacaa 6372
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>gb|AC138225.11| Mus musculus chromosome 1, clone RP23-164F17, complete sequence
          Length = 239758

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 163    gactggaagcaaggggaga 181
              |||||||||||||||||||
Sbjct: 203438 gactggaagcaaggggaga 203420
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>gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome 5, complete sequence
          Length = 196947

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 131    tcattcattcaaagcaaacttaa 153
              |||||||||||||||| ||||||
Sbjct: 105868 tcattcattcaaagcagacttaa 105846
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>gb|AC108948.3| Mus musculus BAC clone RP23-183P12 from 15, complete sequence
          Length = 196923

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 159    tcatgactggaagcaaggg 177
              |||||||||||||||||||
Sbjct: 155166 tcatgactggaagcaaggg 155148
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>emb|AL353751.13| Human DNA sequence from clone RP11-149I23 on chromosome 10 Contains the
             5' end of the LIPA gene for lipase A lysosomal acid
             cholesterol esterase (Wolman disease), a novel gene, the
             IFIT2 gene for interferon-induced protein with
             tetratricopeptide repeats 2, the IFIT4 gene for
             interferon-induced protein with tetratricopeptide repeats
             4, an interferon-induced protein with tetratricopeptide
             repeats 1 (IFIT1) pseudogene, the gene for a novel protein
             similar to interferon-induced protein with
             tetratricopeptide repeats 1 (IFIT1) and a CpG island,
             complete sequence
          Length = 169404

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 137   attcaaagcaaacttaaac 155
             |||||||||||||||||||
Sbjct: 22882 attcaaagcaaacttaaac 22864
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>gb|AC094241.9| Rattus norvegicus 1 BAC CH230-3C7 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215638

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    ggatggattcattcattca 141
              |||||||||||||||||||
Sbjct: 161106 ggatggattcattcattca 161124
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>ref|XM_796784.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC577037, transcript variant 2 (LOC577037), mRNA
          Length = 4300

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 83   acagcaccacaaactgatg 101
            |||||||||||||||||||
Sbjct: 3837 acagcaccacaaactgatg 3819
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>ref|XM_775014.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
            LOC577037, transcript variant 1 (LOC577037), mRNA
          Length = 4269

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 83   acagcaccacaaactgatg 101
            |||||||||||||||||||
Sbjct: 3806 acagcaccacaaactgatg 3788
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 2       aactgaacttgaaattact 20
               |||||||||||||||||||
Sbjct: 2771253 aactgaacttgaaattact 2771235
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>gb|AC141070.2| Homo sapiens chromosome 16 clone RP11-171B13, complete sequence
          Length = 161261

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    attcacaggttttacacaa 50
             |||||||||||||||||||
Sbjct: 87559 attcacaggttttacacaa 87541
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>emb|AL772279.7| Zebrafish DNA sequence from clone CH211-191N13 in linkage group 7
              Contains a putative novel gene, a novel retrotransposon and
              eight CpG islands, complete sequence
          Length = 146786

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    ggatggattcattcattca 141
              |||||||||||||||||||
Sbjct: 133007 ggatggattcattcattca 133025
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>gb|AC093419.2| Homo sapiens chromosome 1 clone RP11-135A15, complete sequence
          Length = 163209

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 130   ttcattcattcaaagcaaa 148
             |||||||||||||||||||
Sbjct: 70533 ttcattcattcaaagcaaa 70551
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>gb|AC007543.4| Homo sapiens 12p12 BAC RPCI11-1018J8 (Roswell Park Cancer Institute
            Human BAC Library) complete sequence
          Length = 212176

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 129  attcattcattcaaagcaa 147
            |||||||||||||||||||
Sbjct: 9383 attcattcattcaaagcaa 9401
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 135      tcattcaaagcaaacttaa 153
                |||||||||||||||||||
Sbjct: 18316748 tcattcaaagcaaacttaa 18316766
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>gb|AC133569.4| Homo sapiens chromosome 16 clone RP11-96K14, complete sequence
          Length = 107932

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 32   attcacaggttttacacaa 50
            |||||||||||||||||||
Sbjct: 3345 attcacaggttttacacaa 3327
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 121      tgggatggattcattcatt 139
                |||||||||||||||||||
Sbjct: 22720457 tgggatggattcattcatt 22720439



 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 41       ttttacacaagcaaattga 59
                |||||||||||||||||||
Sbjct: 21774443 ttttacacaagcaaattga 21774461
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>gb|AC062039.3| Homo sapiens BAC clone RP11-814A15 from 2, complete sequence
          Length = 141040

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 123   ggatggattcattcattca 141
             |||||||||||||||||||
Sbjct: 34557 ggatggattcattcattca 34575
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>dbj|AB045779.1| Lentinula edodes Le.cyp1 gene for cytochrome P450 1, complete cds
          Length = 3987

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 118  gaatgggatggattcattcattc 140
            |||||||||| ||||||||||||
Sbjct: 3334 gaatgggatgcattcattcattc 3356
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>gb|AC137800.3| Homo sapiens chromosome 16 clone RP11-652G5, complete sequence
          Length = 196550

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    attcacaggttttacacaa 50
             |||||||||||||||||||
Sbjct: 82011 attcacaggttttacacaa 82029
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>gb|AC141293.2| Homo sapiens chromosome 16 clone RP11-51M16, complete sequence
          Length = 185339

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     attcacaggttttacacaa 50
              |||||||||||||||||||
Sbjct: 181995 attcacaggttttacacaa 182013
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>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence
          Length = 167832

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    attcacaggttttacacaa 50
             |||||||||||||||||||
Sbjct: 64125 attcacaggttttacacaa 64107
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>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence
          Length = 221622

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     attcacaggttttacacaa 50
              |||||||||||||||||||
Sbjct: 151955 attcacaggttttacacaa 151973
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>gb|AC125455.3| Mus musculus BAC clone RP24-170L2 from chromosome 15, complete sequence
          Length = 145059

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 159   tcatgactggaagcaaggg 177
             |||||||||||||||||||
Sbjct: 62806 tcatgactggaagcaaggg 62824
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    ttttacacaagcaaattga 59
             |||||||||||||||||||
Sbjct: 91626 ttttacacaagcaaattga 91644
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>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0463G11
          Length = 154188

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   tcattcaaagcaaacttaa 153
             |||||||||||||||||||
Sbjct: 31484 tcattcaaagcaaacttaa 31502
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>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1773_H01
          Length = 146543

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 121    tgggatggattcattcatt 139
              |||||||||||||||||||
Sbjct: 138355 tgggatggattcattcatt 138337
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>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1092_A07
          Length = 137081

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 121   tgggatggattcattcatt 139
             |||||||||||||||||||
Sbjct: 39799 tgggatggattcattcatt 39781
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>emb|BX248393.5| Zebrafish DNA sequence from clone CH211-233O13, complete sequence
          Length = 166286

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   ggatggattcattcattca 141
             |||||||||||||||||||
Sbjct: 94461 ggatggattcattcattca 94443
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>emb|AL133240.4|CNS01DUD Human chromosome 14 DNA sequence BAC R-639F2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196853

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 124    gatggattcattcattcaa 142
              |||||||||||||||||||
Sbjct: 143969 gatggattcattcattcaa 143987
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>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 2      aactgaacttgaaattact 20
              |||||||||||||||||||
Sbjct: 249759 aactgaacttgaaattact 249777
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>gb|AC121101.8| Mus musculus chromosome 8, clone RP24-511A8, complete sequence
          Length = 158957

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    ggatggattcattcattca 141
              |||||||||||||||||||
Sbjct: 101741 ggatggattcattcattca 101759
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>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence
          Length = 182046

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    attcacaggttttacacaa 50
             |||||||||||||||||||
Sbjct: 64125 attcacaggttttacacaa 64107
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>emb|AL845489.10| Mouse DNA sequence from clone RP23-300E5 on chromosome 2, complete
             sequence
          Length = 183980

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 120   atgggatggattcattcattcaa 142
             ||||||| |||||||||||||||
Sbjct: 89017 atgggatcgattcattcattcaa 88995
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>gb|AC126939.5| Mus musculus BAC clone RP23-62M8 from 13, complete sequence
          Length = 236514

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 123    ggatggattcattcattca 141
              |||||||||||||||||||
Sbjct: 218166 ggatggattcattcattca 218184
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>emb|AL121773.5|CNS01DSE Human chromosome 14 DNA sequence BAC R-472N19 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158489

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 124   gatggattcattcattcaa 142
             |||||||||||||||||||
Sbjct: 88906 gatggattcattcattcaa 88888
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>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    attcacaggttttacacaa 50
             |||||||||||||||||||
Sbjct: 38149 attcacaggttttacacaa 38167
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>gb|AC136437.2| Homo sapiens chromosome 16 clone RP11-347D23, complete sequence
          Length = 161397

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     attcacaggttttacacaa 50
              |||||||||||||||||||
Sbjct: 128089 attcacaggttttacacaa 128071
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>emb|AL732330.14| Mouse DNA sequence from clone RP23-130L11 on chromosome 2, complete
              sequence
          Length = 241418

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    ggatggattcattcattca 141
              |||||||||||||||||||
Sbjct: 149171 ggatggattcattcattca 149153
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>gb|AC034194.5| Homo sapiens chromosome 3 clone RP11-669E3 map 3p, complete sequence
          Length = 179255

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 28    acaaattcacaggttttacacaa 50
             ||||||||||||| |||||||||
Sbjct: 71996 acaaattcacaggctttacacaa 71974
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>gb|AC026204.5| Homo sapiens chromosome 3 clone RP11-590A20 map 3p, complete sequence
          Length = 171061

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 28     acaaattcacaggttttacacaa 50
              ||||||||||||| |||||||||
Sbjct: 163593 acaaattcacaggctttacacaa 163571
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>dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B382J1, SOD-AML
             region, complete sequence
          Length = 105567

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 2     aactgaacttgaaattact 20
             |||||||||||||||||||
Sbjct: 41704 aactgaacttgaaattact 41722
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>dbj|AB038653.1| Homo sapiens genomic DNA, chromosome 14q32.1, BAC clone:B445M7
          Length = 175330

 Score = 38.2 bits (19), Expect = 9.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 124   gatggattcattcattcaa 142
             |||||||||||||||||||
Sbjct: 64515 gatggattcattcattcaa 64533


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,886,435
Number of Sequences: 3902068
Number of extensions: 1886435
Number of successful extensions: 290491
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 290080
Number of HSP's gapped (non-prelim): 411
length of query: 184
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 162
effective length of database: 17,147,199,772
effective search space: 2777846363064
effective search space used: 2777846363064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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