ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59e03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192784.1| Oryza sativa (japonica cultivar-group), predic... 66 8e-08
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
3dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic D... 66 8e-08
4dbj|AP001541.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 44 0.29
5dbj|AP001284.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 44 0.29
6gb|AY663412.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
7gb|AY663410.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
8gb|AY663408.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
9gb|AY663407.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
10gb|AY663405.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
11gb|AY663404.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
12gb|AY663402.1| Gorilla gorilla voucher Coriell Cell Repository D... 42 1.1
13gb|AY663399.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
14gb|AY663397.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
15gb|AY663396.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
16gb|AY663394.1| Homo sapiens voucher Coriell Cell Repository DNA ... 42 1.1
17emb|CR854861.1| Human DNA sequence from clone XX-BQB97F8_109B10_... 42 1.1
18emb|Z84489.1|HS93N13 Human DNA sequence from clone RP1-93N13 on ... 42 1.1
19emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on ch... 42 1.1
20emb|CR753901.9| Human DNA sequence from clone DADB-166N19 on chr... 42 1.1
21emb|CR753835.3| Human DNA sequence from clone DAMA-265D9 on chro... 42 1.1
22emb|CR753309.2| Human DNA sequence from clone DADB-102D14 on chr... 42 1.1
23gb|AC154217.2| Mus musculus BAC clone RP24-357L19 from chromosom... 42 1.1
24emb|AJ132431.1|GPU132431 Gibberella pulicaris acl1 gene, exons 1... 42 1.1
25ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predic... 40 4.5
26gb|AC142119.2| Homo sapiens fosmid clone XXFOS-80464F2 from 2, c... 40 4.5
27emb|CR932703.1|CNS0KYEU Paramecium tetraurelia, Small GTPase rab... 40 4.5
28emb|CR812847.5| Zebrafish DNA sequence from clone DKEY-9I15 in l... 40 4.5
29emb|BX890620.9| Zebrafish DNA sequence from clone DKEY-48C14 in ... 40 4.5
30emb|BX324223.23| Zebrafish DNA sequence from clone CH211-217F24 ... 40 4.5
31gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cance... 40 4.5
32gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complet... 40 4.5
33gb|AC009505.3| Homo sapiens BAC clone RP11-526D2 from 2, complet... 40 4.5
34gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosom... 40 4.5
35dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
36emb|BX005228.7| Zebrafish DNA sequence from clone CH211-163M17 i... 40 4.5
37dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
38dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
39dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
40dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
41dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
42dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
43emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chr... 40 4.5
44emb|AL929503.4| Zebrafish DNA sequence from clone CH211-158I6, c... 40 4.5 
>ref|NM_192784.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1341

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                        
Query: 243  acttggcaagctcgtcggcgaacacagccgcgtgtggctcctccacgcaacggagcatca 302
            ||||||| ||||||||||||||  | || ||||| |||||||| ||||| |||||||| |
Sbjct: 1333 acttggcgagctcgtcggcgaaggcggcggcgtgcggctcctcgacgcagcggagcatga 1274

                                     
Query: 303  gtcggatcccacgcttgggtgccgg 327
            | ||||| || |||||||| |||||
Sbjct: 1273 ggcggatgccgcgcttgggcgccgg 1249
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                            
Query: 243      acttggcaagctcgtcggcgaacacagccgcgtgtggctcctccacgcaacggagcatca 302
                ||||||| ||||||||||||||  | || ||||| |||||||| ||||| |||||||| |
Sbjct: 24391412 acttggcgagctcgtcggcgaaggcggcggcgtgcggctcctcgacgcagcggagcatga 24391471

                                         
Query: 303      gtcggatcccacgcttgggtgccgg 327
                | ||||| || |||||||| |||||
Sbjct: 24391472 ggcggatgccgcgcttgggcgccgg 24391496



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 208     cggccacggccaagaagcag 227
               ||||||||||||||||||||
Sbjct: 4872532 cggccacggccaagaagcag 4872551
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>dbj|AP002866.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0410E01
          Length = 166753

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                          
Query: 243    acttggcaagctcgtcggcgaacacagccgcgtgtggctcctccacgcaacggagcatca 302
              ||||||| ||||||||||||||  | || ||||| |||||||| ||||| |||||||| |
Sbjct: 137316 acttggcgagctcgtcggcgaaggcggcggcgtgcggctcctcgacgcagcggagcatga 137375

                                       
Query: 303    gtcggatcccacgcttgggtgccgg 327
              | ||||| || |||||||| |||||
Sbjct: 137376 ggcggatgccgcgcttgggcgccgg 137400
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>dbj|AP001541.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-683O4, complete
              sequence
          Length = 212884

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 63     gaaaagaaatcaacgcatggaagagatact 92
              |||||||||||||  |||||||||||||||
Sbjct: 197214 gaaaagaaatcaatacatggaagagatact 197243
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>dbj|AP001284.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-885L14, complete
             sequence
          Length = 153591

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 63    gaaaagaaatcaacgcatggaagagatact 92
             |||||||||||||  |||||||||||||||
Sbjct: 46625 gaaaagaaatcaatacatggaagagatact 46654
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>gb|AY663412.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA00576 MHC
             class II antigen (HLA-DQB1) gene, MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, and MHC class
             II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*110101 allele,
             complete cds
          Length = 108785

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 49100 gtgaagaaaaagtacagtgag 49080
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>gb|AY663410.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA00576 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302
             allele and MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II
             antigen (HLA-DRB1) gene, partial cds
          Length = 105171

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 71811 gtgaagaaaaagtacagtgag 71791
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>gb|AY663408.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA04535 MHC
             class II antigen (HLA-DQB1) gene, MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC
             class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*140501
             allele, complete cds
          Length = 100515

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 53828 gtgaagaaaaagtacagtgag 53808
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>gb|AY663407.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10923 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*020101
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*050101 allele, and MHC class II antigen
             (HLA-DRB1) gene, HLA-DRB1-DRB1*030101 allele, complete cds
          Length = 106318

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 60591 gtgaagaaaaagtacagtgag 60571
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>gb|AY663405.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC
             class II antigen (HLA-DQB1) gene, MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*010401 allele, and MHC
             class II antigen (HLA-DRB1) gene, complete cds
          Length = 116082

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 56156 gtgaagaaaaagtacagtgag 56136
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>gb|AY663404.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10540 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*030302
             allele and MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*0302 allele, complete cds; and MHC class II
             antigen (HLA-DRB1) gene, partial cds
          Length = 109441

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 77105 gtgaagaaaaagtacagtgag 77085
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>gb|AY663402.1| Gorilla gorilla voucher Coriell Cell Repository DNA sample NG05251 MHC
             class II antigen (HLA-DRB1) gene, complete cds
          Length = 54488

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 15227 gtgaagaaaaagtacagtgag 15207
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>gb|AY663399.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01018 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*020101
             allele, MHC class II antigen (HLA-DQA1) gene,
             HLA-DQA1-DQA1*050101 allele, and MHC class II antigen
             (HLA-DRB1) gene, HLA-DRB1-DRB1*030101 allele, complete cds
          Length = 105464

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 53906 gtgaagaaaaagtacagtgag 53886
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>gb|AY663397.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA01960 MHC
             class II antigen (HLA-DQB1), MHC class II antigen
             (HLA-DQA1), and MHC class II antigen (HLA-DRB1) genes,
             complete cds
          Length = 94591

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 49295 gtgaagaaaaagtacagtgag 49275
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>gb|AY663396.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14660 MHC
             class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*050101
             allele and MHC class II antigen (HLA-DQA1) gene, complete
             cds; and MHC class II antigen (HLA-DRB1) gene, partial cds
          Length = 100091

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 65800 gtgaagaaaaagtacagtgag 65780
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>gb|AY663394.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14661 MHC
             class II antigen (HLA-DQB1) gene, MHC class II antigen
             (HLA-DQA1) gene, HLA-DQA1-DQA1*0505 allele, and MHC class
             II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*110401 allele,
             complete cds
          Length = 127159

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 68567 gtgaagaaaaagtacagtgag 68547
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>emb|CR854861.1| Human DNA sequence from clone XX-BQB97F8_109B10_3 on chromosome 6,
            complete sequence
          Length = 8396

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 158  gtgaagaaaaagtacagtgag 178
            |||||||||||||||||||||
Sbjct: 2597 gtgaagaaaaagtacagtgag 2617
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>emb|Z84489.1|HS93N13 Human DNA sequence from clone RP1-93N13 on chromosome 6p21 Contains the
             HLA-DRB1*03011 and HLA-DQA1*05011 genes for major
             histocompatibility complex class II DR beta 1 and DQ alpha
             1, a CpG island, ESTs, STSs and GSSs, complete sequence
          Length = 86896

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 40388 gtgaagaaaaagtacagtgag 40368
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>emb|AL662842.3| Human DNA sequence from clone XXbac-181I15 on chromosome 6 contains the
              HLA-DRB3 gene for major histocompatibility complex, class
              II, DR beta 3, a major histocompatibility complex, class
              II, DR beta pseudogene, the HLA-DRB1 gene for major
              histocompatibility complex, class II, DR beta 1 and one CpG
              island, complete sequence
          Length = 130819

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 158    gtgaagaaaaagtacagtgag 178
              |||||||||||||||||||||
Sbjct: 110645 gtgaagaaaaagtacagtgag 110665
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>emb|CR753901.9| Human DNA sequence from clone DADB-166N19 on chromosome 6, complete
            sequence
          Length = 110625

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 158  gtgaagaaaaagtacagtgag 178
            |||||||||||||||||||||
Sbjct: 2495 gtgaagaaaaagtacagtgag 2515
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>emb|CR753835.3| Human DNA sequence from clone DAMA-265D9 on chromosome 6, complete
             sequence
          Length = 101064

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 70801 gtgaagaaaaagtacagtgag 70821
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>emb|CR753309.2| Human DNA sequence from clone DADB-102D14 on chromosome 6, complete
             sequence
          Length = 107898

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 158   gtgaagaaaaagtacagtgag 178
             |||||||||||||||||||||
Sbjct: 79720 gtgaagaaaaagtacagtgag 79740
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>gb|AC154217.2| Mus musculus BAC clone RP24-357L19 from chromosome 17, complete sequence
          Length = 183535

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 171    acagtgagaaggtgttacaggcatgagaa 199
              |||| ||||||||| ||||||||||||||
Sbjct: 115536 acagagagaaggtggtacaggcatgagaa 115508
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>emb|AJ132431.1|GPU132431 Gibberella pulicaris acl1 gene, exons 1-2, isolate R-6380
          Length = 2819

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 240  cgtacttggcaagctcgtcggcgaa 264
            |||| ||||||||||||||||||||
Sbjct: 2118 cgtagttggcaagctcgtcggcgaa 2094
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>ref|NM_189664.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 912

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 cggccacggccaagaagcag 227
           ||||||||||||||||||||
Sbjct: 40  cggccacggccaagaagcag 21
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>gb|AC142119.2| Homo sapiens fosmid clone XXFOS-80464F2 from 2, complete sequence
          Length = 10256

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 93   agtgtggtttatacctgcac 112
            ||||||||||||||||||||
Sbjct: 5332 agtgtggtttatacctgcac 5313
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>emb|CR932703.1|CNS0KYEU Paramecium tetraurelia, Small GTPase rab, putative, complete gene
          Length = 3001

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 48  ctatttttgcacattgaaaa 67
           ||||||||||||||||||||
Sbjct: 495 ctatttttgcacattgaaaa 514
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>emb|CR812847.5| Zebrafish DNA sequence from clone DKEY-9I15 in linkage group 14,
             complete sequence
          Length = 230522

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    agatactagtgtggtttata 105
             ||||||||||||||||||||
Sbjct: 97669 agatactagtgtggtttata 97650
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>emb|BX890620.9| Zebrafish DNA sequence from clone DKEY-48C14 in linkage group 14,
              complete sequence
          Length = 214857

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 147    tgcacaccaatgtgaagaaaaagt 170
              ||||||||| ||||||||||||||
Sbjct: 193251 tgcacaccattgtgaagaaaaagt 193228
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>emb|BX324223.23| Zebrafish DNA sequence from clone CH211-217F24 in linkage group 21,
              complete sequence
          Length = 223297

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 51     tttttgcacattgaaaagaaatca 74
              ||||||||||||||||| ||||||
Sbjct: 115077 tttttgcacattgaaaataaatca 115100
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>gb|AC125610.4| Homo sapiens 3 BAC RP11-189B7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 159706

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    tatttttgcacattgaaaagaaat 72
             ||||||||||||||||||| ||||
Sbjct: 87054 tatttttgcacattgaaaataaat 87077
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>gb|AC106899.5| Homo sapiens BAC clone RP11-734N2 from 2, complete sequence
          Length = 132562

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     caccataaactgaattttat 24
             ||||||||||||||||||||
Sbjct: 84470 caccataaactgaattttat 84489
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>gb|AC009505.3| Homo sapiens BAC clone RP11-526D2 from 2, complete sequence
          Length = 163880

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    aaaagaaatcaacgcatgga 83
             ||||||||||||||||||||
Sbjct: 97155 aaaagaaatcaacgcatgga 97136
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>gb|AC156569.3| Mus musculus BAC clone RP23-315K10 from chromosome 13, complete
             sequence
          Length = 165570

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   ccacggccaagaagcagtat 230
             ||||||||||||||||||||
Sbjct: 51899 ccacggccaagaagcagtat 51880
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>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0710E05
          Length = 179714

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    cggccacggccaagaagcag 227
              ||||||||||||||||||||
Sbjct: 117181 cggccacggccaagaagcag 117200
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>emb|BX005228.7| Zebrafish DNA sequence from clone CH211-163M17 in linkage group 14,
              complete sequence
          Length = 171037

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     agatactagtgtggtttata 105
              ||||||||||||||||||||
Sbjct: 133548 agatactagtgtggtttata 133567
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>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full
           insert sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 cggccacggccaagaagcag 227
           ||||||||||||||||||||
Sbjct: 63  cggccacggccaagaagcag 44
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>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full
           insert sequence
          Length = 1094

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 cggccacggccaagaagcag 227
           ||||||||||||||||||||
Sbjct: 62  cggccacggccaagaagcag 43
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>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full
           insert sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 cggccacggccaagaagcag 227
           ||||||||||||||||||||
Sbjct: 63  cggccacggccaagaagcag 44
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>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full
           insert sequence
          Length = 1308

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 cggccacggccaagaagcag 227
           ||||||||||||||||||||
Sbjct: 276 cggccacggccaagaagcag 257
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>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full
           insert sequence
          Length = 1095

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 cggccacggccaagaagcag 227
           ||||||||||||||||||||
Sbjct: 63  cggccacggccaagaagcag 44
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>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full
           insert sequence
          Length = 1114

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 cggccacggccaagaagcag 227
           ||||||||||||||||||||
Sbjct: 63  cggccacggccaagaagcag 44
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>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete
              sequence
          Length = 176581

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    ccacggccaagaagcagtat 230
              ||||||||||||||||||||
Sbjct: 165197 ccacggccaagaagcagtat 165178
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>emb|AL929503.4| Zebrafish DNA sequence from clone CH211-158I6, complete sequence
          Length = 174012

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 147   tgcacaccaatgtgaagaaaaagt 170
             ||||||||| ||||||||||||||
Sbjct: 17299 tgcacaccattgtgaagaaaaagt 17322


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,958,812
Number of Sequences: 3902068
Number of extensions: 3958812
Number of successful extensions: 94736
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94602
Number of HSP's gapped (non-prelim): 134
length of query: 337
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 315
effective length of database: 17,147,199,772
effective search space: 5401367928180
effective search space used: 5401367928180
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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