Clone Name | rbart59d11 |
---|---|
Clone Library Name | barley_pub |
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds Length = 1282 Score = 190 bits (96), Expect = 1e-45 Identities = 167/190 (87%), Gaps = 3/190 (1%) Strand = Plus / Minus Query: 37 gcgaacggacaccgactaacccgcacgcccgtgcactggcattcaagcacgcacacatca 96 |||||||||||||||| | || ||||||||||||| | ||||||||| ||||| |||||| Sbjct: 1192 gcgaacggacaccgaccagccagcacgcccgtgcattcgcattcaaggacgcatacatca 1133 Query: 97 ggccatggcgaccttgtcgtgcgagcccgggcggcggagcatctcgatcgccccagcgta 156 | || |||||||||| |||| |||||||| |||||||||||||||||| ||||||||| Sbjct: 1132 gcccttggcgaccttatcgtcggagcccggtcggcggagcatctcgatcaccccagcgt- 1074 Query: 157 agaagcggacgaagaggaggaggacgggttgaccaggctgcagttgaggcggatctggcc 216 | ||||||||||| ||||||| ||||||||| |||||||||||||||||||||| || Sbjct: 1073 --aggcggacgaagaagaggaggccgggttgacgaggctgcagttgaggcggatctcccc 1016 Query: 217 ctgcgtgccg 226 |||||||||| Sbjct: 1015 ctgcgtgccg 1006
>ref|XM_737243.1| Plasmodium chabaudi chabaudi microfibril-associated protein (PC000485.02.0) partial mRNA Length = 960 Score = 46.1 bits (23), Expect = 0.047 Identities = 23/23 (100%) Strand = Plus / Plus Query: 158 gaagcggacgaagaggaggagga 180 ||||||||||||||||||||||| Sbjct: 112 gaagcggacgaagaggaggagga 134
>ref|XM_755010.1| Ustilago maydis 521 hypothetical protein (UM03956.1) partial mRNA Length = 492 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 157 agaagcggacgaagaggaggaggacg 182 |||||||||||| ||||||||||||| Sbjct: 462 agaagcggacgacgaggaggaggacg 487
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 983 gaggacgggttgacggcgctgcagttgagccggatct 947
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gaagcggacgaagaggaggaggacg 182 |||| |||||||||||||||||||| Sbjct: 1651277 gaagaggacgaagaggaggaggacg 1651301
>ref|XM_569755.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNC05530) partial mRNA Length = 2291 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gaagcggacgaagaggaggaggacg 182 |||| |||||||||||||||||||| Sbjct: 1469 gaagaggacgaagaggaggaggacg 1493
>ref|XM_569756.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNC05530) partial mRNA Length = 1907 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gaagcggacgaagaggaggaggacg 182 |||| |||||||||||||||||||| Sbjct: 1469 gaagaggacgaagaggaggaggacg 1493
>ref|XM_569757.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein (CNC05530) partial mRNA Length = 1843 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 158 gaagcggacgaagaggaggaggacg 182 |||| |||||||||||||||||||| Sbjct: 1405 gaagaggacgaagaggaggaggacg 1429
>emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chromosome 11 Contains the 5' end of the Kcnip1 gene for Kv channel-interacting protein 1, the Kcnmb1 gene for potassium large conductance calcium-activated channel, subfamily M, beta member 1 and the 3' end of a novel gene, complete sequence Length = 173783 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 aagaagcggacgaagaggaggagga 180 |||||| |||||||||||||||||| Sbjct: 24787 aagaaggggacgaagaggaggagga 24811
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 agcggacgaagaggaggagga 180 ||||||||||||||||||||| Sbjct: 20349420 agcggacgaagaggaggagga 20349440
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 12552477 gaggacgggttgacggcgctgcagttgagccggatct 12552441
>gb|AC133184.3| Mus musculus BAC clone RP24-186A17 from chromosome 5, complete sequence Length = 169357 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 aagaagcggacgaagaggaggagga 180 |||||||||| |||||||||||||| Sbjct: 59751 aagaagcggaggaagaggaggagga 59775
>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016D02 Length = 157822 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 agcggacgaagaggaggagga 180 ||||||||||||||||||||| Sbjct: 72815 agcggacgaagaggaggagga 72835
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 64087 gaggacgggttgacggcgctgcagttgagccggatct 64051
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 138092 gaggacgggttgacggcgctgcagttgagccggatct 138056
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 1053 gaggacgggttgacggcgctgcagttgagccggatct 1017
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full insert sequence Length = 1492 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 1058 gaggacgggttgacggcgctgcagttgagccggatct 1022
>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full insert sequence Length = 1015 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 747 gaggacgggttgacggcgctgcagttgagccggatct 711
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for class III peroxidase 15 precursor, exons 1-3 Length = 5322 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212 |||||||||||||| |||||||||||| ||||||| Sbjct: 5243 gaggacgggttgacggcgctgcagttgagccggatct 5207
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 aagcacgcacacatcaggcca 101 ||||||||||||||||||||| Sbjct: 3726479 aagcacgcacacatcaggcca 3726459
>gb|AC154880.17| Mus musculus chromosome 15, clone RP24-191N3, complete sequence Length = 184220 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 156 aagaagcggacgaagaggaggagga 180 |||||| |||||||||||||||||| Sbjct: 153236 aagaagaggacgaagaggaggagga 153260
>gb|BC043352.2| Homo sapiens zinc finger and BTB domain containing 4, mRNA (cDNA clone MGC:49935 IMAGE:6175382), complete cds Length = 5888 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 2189 ggacgaagaggaggaggacg 2208
>ref|XM_464808.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 gcggacgaagaggaggagga 180 |||||||||||||||||||| Sbjct: 357 gcggacgaagaggaggagga 376
>gb|AY432607.1| Aedes aegypti ASAP ID: 35787 transcription factor mRNA sequence Length = 348 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 150 ggacgaagaggaggaggacg 169
>ref|XM_871492.1| PREDICTED: Bos taurus similar to adenylate cyclase 4 (LOC619170), partial mRNA Length = 690 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 agaagcggacgaagaggaggagga 180 |||||| ||||||||||||||||| Sbjct: 71 agaagcagacgaagaggaggagga 48
>ref|XM_957839.1| Neurospora crassa OR74A hypothetical protein (NCU06216.1) partial mRNA Length = 3789 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 aagaagcggacgaagaggaggaggacgg 183 |||||| ||| ||||||||||||||||| Sbjct: 3674 aagaagaggaagaagaggaggaggacgg 3701
>ref|XM_326070.1| Neurospora crassa OR74A hypothetical protein (NCU06216.1) partial mRNA Length = 3789 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 156 aagaagcggacgaagaggaggaggacgg 183 |||||| ||| ||||||||||||||||| Sbjct: 3674 aagaagaggaagaagaggaggaggacgg 3701
>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence Length = 294716 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 188763 ggacgaagaggaggaggacg 188744
>gb|BC015902.1| Homo sapiens zinc finger and BTB domain containing 4, mRNA (cDNA clone IMAGE:3915660), partial cds Length = 3226 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 164 ggacgaagaggaggaggacg 183
>ref|XM_805852.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510823.60) partial mRNA Length = 2049 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 1839 ggacgaagaggaggaggacg 1858
>ref|XM_537394.2| PREDICTED: Canis familiaris similar to adenylate cyclase 4 (LOC480271), mRNA Length = 3299 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 157 agaagcggacgaagaggaggagga 180 |||||| ||||||||||||||||| Sbjct: 1894 agaagcagacgaagaggaggagga 1871
>gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, complete sequence Length = 184349 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 113151 ggacgaagaggaggaggacg 113132
>gb|AY302699.1| Homo sapiens KAISO-like zinc finger protein 1 mRNA, complete cds Length = 5801 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 2080 ggacgaagaggaggaggacg 2099
>ref|NM_020899.2| Homo sapiens zinc finger and BTB domain containing 4 (ZBTB4), mRNA Length = 5888 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 2189 ggacgaagaggaggaggacg 2208
>dbj|AK127065.1| Homo sapiens cDNA FLJ45122 fis, clone BRAWH3036247, weakly similar to Zinc finger protein 228 Length = 3772 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 157 agaagcggacgaagaggaggaggacggg 184 ||||| ||| |||||||||||||||||| Sbjct: 1214 agaagaggaagaagaggaggaggacggg 1241
>dbj|AK122971.1| Homo sapiens cDNA FLJ16715 fis, clone UTERU3000298, weakly similar to ZINC FINGER PROTEIN 151 Length = 5009 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 2064 ggacgaagaggaggaggacg 2083
>dbj|AK122826.1| Homo sapiens cDNA FLJ16429 fis, clone BRACE3008238 Length = 4437 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 1492 ggacgaagaggaggaggacg 1511
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 29304 ggacgaagaggaggaggacg 29323
>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence Length = 171461 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 157 agaagcggacgaagaggaggaggacggg 184 ||||| ||| |||||||||||||||||| Sbjct: 92634 agaagaggaagaagaggaggaggacggg 92607
>ref|XM_683538.1| PREDICTED: Danio rerio similar to zinc finger protein 567 (LOC560148), mRNA Length = 1697 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 agaagcggacgaagaggaggagga 180 ||||||||| |||||||||||||| Sbjct: 542 agaagcggatgaagaggaggagga 565
>gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, complete sequence Length = 273403 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 aggaggacgggttgaccagg 193 |||||||||||||||||||| Sbjct: 222525 aggaggacgggttgaccagg 222506
>gb|AY757327.1| Oreochromis niloticus isolate B6a Hox protein gene, partial cds Length = 225 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 183 ggacgaagaggaggaggacg 164
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 16906152 ggacgaagaggaggaggacg 16906171
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aagcggacgaagaggaggag 178 |||||||||||||||||||| Sbjct: 694905 aagcggacgaagaggaggag 694924
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcggacgaagaggaggagga 180 |||||||||||||||||||| Sbjct: 8320038 gcggacgaagaggaggagga 8320019
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 90604 ggacgaagaggaggaggacg 90623
>gb|AF256078.1|AF256078 Drosophila simulans strain sim8 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 599 ggacgaagaggaggaggacg 618
>gb|AF256077.1|AF256077 Drosophila simulans strain sim7 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 599 ggacgaagaggaggaggacg 618
>gb|AF256076.1|AF256076 Drosophila simulans strain sim5 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 599 ggacgaagaggaggaggacg 618
>gb|AF256075.1|AF256075 Drosophila simulans strain sim4 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 599 ggacgaagaggaggaggacg 618
>gb|AF256074.1|AF256074 Drosophila simulans strain sim3 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 599 ggacgaagaggaggaggacg 618
>gb|AF256073.1|AF256073 Drosophila simulans strain sim2 cut protein (ct) gene, partial cds Length = 1090 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 599 ggacgaagaggaggaggacg 618
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcggacgaagaggaggagga 180 |||||||||||||||||||| Sbjct: 96709 gcggacgaagaggaggagga 96690
>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia Length = 1923819 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 gaagcggacgaagaggagga 177 |||||||||||||||||||| Sbjct: 742535 gaagcggacgaagaggagga 742516
>gb|AC006059.3|AC006059 Homo sapiens PAC RPCI4-613B23 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 185161 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 157 agaagcggacgaagaggaggaggacggg 184 ||||| ||| |||||||||||||||||| Sbjct: 109183 agaagaggaagaagaggaggaggacggg 109156
>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence Length = 138567 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cgtttattatggggagggat 32 |||||||||||||||||||| Sbjct: 68929 cgtttattatggggagggat 68910
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 16915192 ggacgaagaggaggaggacg 16915211
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gacgaagaggaggaggacgg 183 |||||||||||||||||||| Sbjct: 1752633 gacgaagaggaggaggacgg 1752614
>emb|AL663081.10| Mouse DNA sequence from clone RP23-138F13 on chromosome X, complete sequence Length = 206915 Score = 40.1 bits (20), Expect = 2.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 aagaagcggacgaagaggaggagg 179 |||||| ||||||||||||||||| Sbjct: 120935 aagaagaggacgaagaggaggagg 120912
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 aagcggacgaagaggaggag 178 |||||||||||||||||||| Sbjct: 40104 aagcggacgaagaggaggag 40123
>dbj|AB040971.2| Homo sapiens mRNA for KIAA1538 protein, partial cds Length = 5851 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ggacgaagaggaggaggacg 182 |||||||||||||||||||| Sbjct: 2164 ggacgaagaggaggaggacg 2183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,954,046 Number of Sequences: 3902068 Number of extensions: 1954046 Number of successful extensions: 207499 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 206578 Number of HSP's gapped (non-prelim): 920 length of query: 226 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 204 effective length of database: 17,147,199,772 effective search space: 3498028753488 effective search space used: 3498028753488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)