ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59d11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, com... 190 1e-45
2ref|XM_737243.1| Plasmodium chabaudi chabaudi microfibril-associ... 46 0.047
3ref|XM_755010.1| Ustilago maydis 521 hypothetical protein (UM039... 44 0.18
4ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predic... 42 0.73
5gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 0.73
6ref|XM_569755.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 0.73
7ref|XM_569756.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 0.73
8ref|XM_569757.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 0.73
9emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chro... 42 0.73
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.73
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.73
12gb|AC133184.3| Mus musculus BAC clone RP24-186A17 from chromosom... 42 0.73
13dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.73
14dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.73
15dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 42 0.73
16dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.73
17dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.73
18dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.73
19tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 0.73
20gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 0.73
21gb|AC154880.17| Mus musculus chromosome 15, clone RP24-191N3, co... 42 0.73
22gb|BC043352.2| Homo sapiens zinc finger and BTB domain containin... 40 2.9
23ref|XM_464808.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.9
24gb|AY432607.1| Aedes aegypti ASAP ID: 35787 transcription factor... 40 2.9
25ref|XM_871492.1| PREDICTED: Bos taurus similar to adenylate cycl... 40 2.9
26ref|XM_957839.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.9
27ref|XM_326070.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.9
28gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete se... 40 2.9
29gb|BC015902.1| Homo sapiens zinc finger and BTB domain containin... 40 2.9
30ref|XM_805852.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 2.9
31ref|XM_537394.2| PREDICTED: Canis familiaris similar to adenylat... 40 2.9
32gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, c... 40 2.9
33gb|AY302699.1| Homo sapiens KAISO-like zinc finger protein 1 mRN... 40 2.9
34ref|NM_020899.2| Homo sapiens zinc finger and BTB domain contain... 40 2.9
35dbj|AK127065.1| Homo sapiens cDNA FLJ45122 fis, clone BRAWH30362... 40 2.9
36dbj|AK122971.1| Homo sapiens cDNA FLJ16715 fis, clone UTERU30002... 40 2.9
37dbj|AK122826.1| Homo sapiens cDNA FLJ16429 fis, clone BRACE3008238 40 2.9
38gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 40 2.9
39gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, compl... 40 2.9
40ref|XM_683538.1| PREDICTED: Danio rerio similar to zinc finger p... 40 2.9
41gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, compl... 40 2.9
42gb|AY757327.1| Oreochromis niloticus isolate B6a Hox protein gen... 40 2.9
43dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
44dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
45dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
46gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079... 40 2.9
47gb|AF256078.1|AF256078 Drosophila simulans strain sim8 cut prote... 40 2.9
48gb|AF256077.1|AF256077 Drosophila simulans strain sim7 cut prote... 40 2.9
49gb|AF256076.1|AF256076 Drosophila simulans strain sim5 cut prote... 40 2.9
50gb|AF256075.1|AF256075 Drosophila simulans strain sim4 cut prote... 40 2.9
51gb|AF256074.1|AF256074 Drosophila simulans strain sim3 cut prote... 40 2.9
52gb|AF256073.1|AF256073 Drosophila simulans strain sim2 cut prote... 40 2.9
53dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.9
54emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 2.9
55gb|AC006059.3|AC006059 Homo sapiens PAC RPCI4-613B23 (Roswell P... 40 2.9
56gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, compl... 40 2.9
57gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
58gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 2.9
59emb|AL663081.10| Mouse DNA sequence from clone RP23-138F13 on ch... 40 2.9
60gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.9
61dbj|AB040971.2| Homo sapiens mRNA for KIAA1538 protein, partial cds 40 2.9

>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds
          Length = 1282

 Score =  190 bits (96), Expect = 1e-45
 Identities = 167/190 (87%), Gaps = 3/190 (1%)
 Strand = Plus / Minus

                                                                        
Query: 37   gcgaacggacaccgactaacccgcacgcccgtgcactggcattcaagcacgcacacatca 96
            |||||||||||||||| | || ||||||||||||| | ||||||||| ||||| ||||||
Sbjct: 1192 gcgaacggacaccgaccagccagcacgcccgtgcattcgcattcaaggacgcatacatca 1133

                                                                        
Query: 97   ggccatggcgaccttgtcgtgcgagcccgggcggcggagcatctcgatcgccccagcgta 156
            | || |||||||||| ||||  |||||||| |||||||||||||||||| ||||||||| 
Sbjct: 1132 gcccttggcgaccttatcgtcggagcccggtcggcggagcatctcgatcaccccagcgt- 1074

                                                                        
Query: 157  agaagcggacgaagaggaggaggacgggttgaccaggctgcagttgaggcggatctggcc 216
              | ||||||||||| ||||||| ||||||||| ||||||||||||||||||||||  ||
Sbjct: 1073 --aggcggacgaagaagaggaggccgggttgacgaggctgcagttgaggcggatctcccc 1016

                      
Query: 217  ctgcgtgccg 226
            ||||||||||
Sbjct: 1015 ctgcgtgccg 1006



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>ref|XM_737243.1| Plasmodium chabaudi chabaudi microfibril-associated protein
           (PC000485.02.0) partial mRNA
          Length = 960

 Score = 46.1 bits (23), Expect = 0.047
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 158 gaagcggacgaagaggaggagga 180
           |||||||||||||||||||||||
Sbjct: 112 gaagcggacgaagaggaggagga 134



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>ref|XM_755010.1| Ustilago maydis 521 hypothetical protein (UM03956.1) partial mRNA
          Length = 492

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 157 agaagcggacgaagaggaggaggacg 182
           |||||||||||| |||||||||||||
Sbjct: 462 agaagcggacgacgaggaggaggacg 487



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>ref|NM_183816.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1062

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212
           ||||||||||||||   |||||||||||| |||||||
Sbjct: 983 gaggacgggttgacggcgctgcagttgagccggatct 947



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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 158     gaagcggacgaagaggaggaggacg 182
               |||| ||||||||||||||||||||
Sbjct: 1651277 gaagaggacgaagaggaggaggacg 1651301



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>ref|XM_569755.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein
            (CNC05530) partial mRNA
          Length = 2291

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 158  gaagcggacgaagaggaggaggacg 182
            |||| ||||||||||||||||||||
Sbjct: 1469 gaagaggacgaagaggaggaggacg 1493



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>ref|XM_569756.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein
            (CNC05530) partial mRNA
          Length = 1907

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 158  gaagcggacgaagaggaggaggacg 182
            |||| ||||||||||||||||||||
Sbjct: 1469 gaagaggacgaagaggaggaggacg 1493



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>ref|XM_569757.1| Cryptococcus neoformans var. neoformans JEC21 cytoplasm protein
            (CNC05530) partial mRNA
          Length = 1843

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 158  gaagcggacgaagaggaggaggacg 182
            |||| ||||||||||||||||||||
Sbjct: 1405 gaagaggacgaagaggaggaggacg 1429



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>emb|AL731867.27| Mouse DNA sequence from clone RP23-73A4 on chromosome 11 Contains the
             5' end of the Kcnip1 gene for Kv channel-interacting
             protein 1, the Kcnmb1 gene for potassium large conductance
             calcium-activated channel, subfamily M, beta member 1 and
             the 3' end of a novel gene, complete sequence
          Length = 173783

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 156   aagaagcggacgaagaggaggagga 180
             |||||| ||||||||||||||||||
Sbjct: 24787 aagaaggggacgaagaggaggagga 24811



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 160      agcggacgaagaggaggagga 180
                |||||||||||||||||||||
Sbjct: 20349420 agcggacgaagaggaggagga 20349440



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 176      gaggacgggttgaccaggctgcagttgaggcggatct 212
                ||||||||||||||   |||||||||||| |||||||
Sbjct: 12552477 gaggacgggttgacggcgctgcagttgagccggatct 12552441



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>gb|AC133184.3| Mus musculus BAC clone RP24-186A17 from chromosome 5, complete sequence
          Length = 169357

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 156   aagaagcggacgaagaggaggagga 180
             |||||||||| ||||||||||||||
Sbjct: 59751 aagaagcggaggaagaggaggagga 59775



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>dbj|AP004731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0016D02
          Length = 157822

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 160   agcggacgaagaggaggagga 180
             |||||||||||||||||||||
Sbjct: 72815 agcggacgaagaggaggagga 72835



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>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 176   gaggacgggttgaccaggctgcagttgaggcggatct 212
             ||||||||||||||   |||||||||||| |||||||
Sbjct: 64087 gaggacgggttgacggcgctgcagttgagccggatct 64051



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>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1135C02
          Length = 152306

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                   
Query: 176    gaggacgggttgaccaggctgcagttgaggcggatct 212
              ||||||||||||||   |||||||||||| |||||||
Sbjct: 138092 gaggacgggttgacggcgctgcagttgagccggatct 138056



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>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full
            insert sequence
          Length = 1271

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 176  gaggacgggttgaccaggctgcagttgaggcggatct 212
            ||||||||||||||   |||||||||||| |||||||
Sbjct: 1053 gaggacgggttgacggcgctgcagttgagccggatct 1017



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>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full
            insert sequence
          Length = 1492

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 176  gaggacgggttgaccaggctgcagttgaggcggatct 212
            ||||||||||||||   |||||||||||| |||||||
Sbjct: 1058 gaggacgggttgacggcgctgcagttgagccggatct 1022



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>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full
           insert sequence
          Length = 1015

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 176 gaggacgggttgaccaggctgcagttgaggcggatct 212
           ||||||||||||||   |||||||||||| |||||||
Sbjct: 747 gaggacgggttgacggcgctgcagttgagccggatct 711



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>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for
            class III peroxidase 15 precursor, exons 1-3
          Length = 5322

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 176  gaggacgggttgaccaggctgcagttgaggcggatct 212
            ||||||||||||||   |||||||||||| |||||||
Sbjct: 5243 gaggacgggttgacggcgctgcagttgagccggatct 5207



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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 81      aagcacgcacacatcaggcca 101
               |||||||||||||||||||||
Sbjct: 3726479 aagcacgcacacatcaggcca 3726459



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>gb|AC154880.17| Mus musculus chromosome 15, clone RP24-191N3, complete sequence
          Length = 184220

 Score = 42.1 bits (21), Expect = 0.73
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 156    aagaagcggacgaagaggaggagga 180
              |||||| ||||||||||||||||||
Sbjct: 153236 aagaagaggacgaagaggaggagga 153260



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>gb|BC043352.2| Homo sapiens zinc finger and BTB domain containing 4, mRNA (cDNA
            clone MGC:49935 IMAGE:6175382), complete cds
          Length = 5888

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggacgaagaggaggaggacg 182
            ||||||||||||||||||||
Sbjct: 2189 ggacgaagaggaggaggacg 2208



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>ref|XM_464808.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 411

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 161 gcggacgaagaggaggagga 180
           ||||||||||||||||||||
Sbjct: 357 gcggacgaagaggaggagga 376



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>gb|AY432607.1| Aedes aegypti ASAP ID: 35787 transcription factor mRNA sequence
          Length = 348

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 150 ggacgaagaggaggaggacg 169



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>ref|XM_871492.1| PREDICTED: Bos taurus similar to adenylate cyclase 4 (LOC619170),
           partial mRNA
          Length = 690

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 157 agaagcggacgaagaggaggagga 180
           |||||| |||||||||||||||||
Sbjct: 71  agaagcagacgaagaggaggagga 48



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>ref|XM_957839.1| Neurospora crassa OR74A hypothetical protein (NCU06216.1) partial
            mRNA
          Length = 3789

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 156  aagaagcggacgaagaggaggaggacgg 183
            |||||| ||| |||||||||||||||||
Sbjct: 3674 aagaagaggaagaagaggaggaggacgg 3701



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>ref|XM_326070.1| Neurospora crassa OR74A hypothetical protein (NCU06216.1) partial
            mRNA
          Length = 3789

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 156  aagaagcggacgaagaggaggaggacgg 183
            |||||| ||| |||||||||||||||||
Sbjct: 3674 aagaagaggaagaagaggaggaggacgg 3701



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>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence
          Length = 294716

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ggacgaagaggaggaggacg 182
              ||||||||||||||||||||
Sbjct: 188763 ggacgaagaggaggaggacg 188744



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>gb|BC015902.1| Homo sapiens zinc finger and BTB domain containing 4, mRNA (cDNA
           clone IMAGE:3915660), partial cds
          Length = 3226

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 164 ggacgaagaggaggaggacg 183



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>ref|XM_805852.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510823.60) partial mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggacgaagaggaggaggacg 182
            ||||||||||||||||||||
Sbjct: 1839 ggacgaagaggaggaggacg 1858



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>ref|XM_537394.2| PREDICTED: Canis familiaris similar to adenylate cyclase 4
            (LOC480271), mRNA
          Length = 3299

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 157  agaagcggacgaagaggaggagga 180
            |||||| |||||||||||||||||
Sbjct: 1894 agaagcagacgaagaggaggagga 1871



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>gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, complete sequence
          Length = 184349

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    ggacgaagaggaggaggacg 182
              ||||||||||||||||||||
Sbjct: 113151 ggacgaagaggaggaggacg 113132



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>gb|AY302699.1| Homo sapiens KAISO-like zinc finger protein 1 mRNA, complete cds
          Length = 5801

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggacgaagaggaggaggacg 182
            ||||||||||||||||||||
Sbjct: 2080 ggacgaagaggaggaggacg 2099



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>ref|NM_020899.2| Homo sapiens zinc finger and BTB domain containing 4 (ZBTB4), mRNA
          Length = 5888

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggacgaagaggaggaggacg 182
            ||||||||||||||||||||
Sbjct: 2189 ggacgaagaggaggaggacg 2208



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>dbj|AK127065.1| Homo sapiens cDNA FLJ45122 fis, clone BRAWH3036247, weakly  similar
            to Zinc finger protein 228
          Length = 3772

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 157  agaagcggacgaagaggaggaggacggg 184
            ||||| ||| ||||||||||||||||||
Sbjct: 1214 agaagaggaagaagaggaggaggacggg 1241



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>dbj|AK122971.1| Homo sapiens cDNA FLJ16715 fis, clone UTERU3000298, weakly  similar
            to ZINC FINGER PROTEIN 151
          Length = 5009

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggacgaagaggaggaggacg 182
            ||||||||||||||||||||
Sbjct: 2064 ggacgaagaggaggaggacg 2083



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>dbj|AK122826.1| Homo sapiens cDNA FLJ16429 fis, clone BRACE3008238
          Length = 4437

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggacgaagaggaggaggacg 182
            ||||||||||||||||||||
Sbjct: 1492 ggacgaagaggaggaggacg 1511



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>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ggacgaagaggaggaggacg 182
             ||||||||||||||||||||
Sbjct: 29304 ggacgaagaggaggaggacg 29323



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>gb|AC092041.2| Homo sapiens chromosome 3 clone RP11-132K4, complete sequence
          Length = 171461

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 157   agaagcggacgaagaggaggaggacggg 184
             ||||| ||| ||||||||||||||||||
Sbjct: 92634 agaagaggaagaagaggaggaggacggg 92607



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>ref|XM_683538.1| PREDICTED: Danio rerio similar to zinc finger protein 567
           (LOC560148), mRNA
          Length = 1697

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 157 agaagcggacgaagaggaggagga 180
           ||||||||| ||||||||||||||
Sbjct: 542 agaagcggatgaagaggaggagga 565



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>gb|AC011498.7| Homo sapiens chromosome 19 clone CTB-50L17, complete sequence
          Length = 273403

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    aggaggacgggttgaccagg 193
              ||||||||||||||||||||
Sbjct: 222525 aggaggacgggttgaccagg 222506



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>gb|AY757327.1| Oreochromis niloticus isolate B6a Hox protein gene, partial cds
          Length = 225

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 183 ggacgaagaggaggaggacg 164



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      ggacgaagaggaggaggacg 182
                ||||||||||||||||||||
Sbjct: 16906152 ggacgaagaggaggaggacg 16906171



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 159    aagcggacgaagaggaggag 178
              ||||||||||||||||||||
Sbjct: 694905 aagcggacgaagaggaggag 694924



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 161     gcggacgaagaggaggagga 180
               ||||||||||||||||||||
Sbjct: 8320038 gcggacgaagaggaggagga 8320019



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>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete
             sequence
          Length = 147452

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ggacgaagaggaggaggacg 182
             ||||||||||||||||||||
Sbjct: 90604 ggacgaagaggaggaggacg 90623



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>gb|AF256078.1|AF256078 Drosophila simulans strain sim8 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 599 ggacgaagaggaggaggacg 618



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>gb|AF256077.1|AF256077 Drosophila simulans strain sim7 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 599 ggacgaagaggaggaggacg 618



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>gb|AF256076.1|AF256076 Drosophila simulans strain sim5 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 599 ggacgaagaggaggaggacg 618



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>gb|AF256075.1|AF256075 Drosophila simulans strain sim4 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 599 ggacgaagaggaggaggacg 618



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>gb|AF256074.1|AF256074 Drosophila simulans strain sim3 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 599 ggacgaagaggaggaggacg 618



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>gb|AF256073.1|AF256073 Drosophila simulans strain sim2 cut protein (ct) gene, partial cds
          Length = 1090

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 ggacgaagaggaggaggacg 182
           ||||||||||||||||||||
Sbjct: 599 ggacgaagaggaggaggacg 618



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>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0090H18
          Length = 174842

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   gcggacgaagaggaggagga 180
             ||||||||||||||||||||
Sbjct: 96709 gcggacgaagaggaggagga 96690



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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 158    gaagcggacgaagaggagga 177
              ||||||||||||||||||||
Sbjct: 742535 gaagcggacgaagaggagga 742516



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>gb|AC006059.3|AC006059 Homo sapiens  PAC RPCI4-613B23 (Roswell Park Cancer Institute Human PAC
              Library) complete sequence
          Length = 185161

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 157    agaagcggacgaagaggaggaggacggg 184
              ||||| ||| ||||||||||||||||||
Sbjct: 109183 agaagaggaagaagaggaggaggacggg 109156



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>gb|AC174763.1| Gasterosteus aculeatus clone VMRC28-119C03, complete sequence
          Length = 138567

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    cgtttattatggggagggat 32
             ||||||||||||||||||||
Sbjct: 68929 cgtttattatggggagggat 68910



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 163      ggacgaagaggaggaggacg 182
                ||||||||||||||||||||
Sbjct: 16915192 ggacgaagaggaggaggacg 16915211



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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 164     gacgaagaggaggaggacgg 183
               ||||||||||||||||||||
Sbjct: 1752633 gacgaagaggaggaggacgg 1752614



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>emb|AL663081.10| Mouse DNA sequence from clone RP23-138F13 on chromosome X, complete
              sequence
          Length = 206915

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 156    aagaagcggacgaagaggaggagg 179
              |||||| |||||||||||||||||
Sbjct: 120935 aagaagaggacgaagaggaggagg 120912



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>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   aagcggacgaagaggaggag 178
             ||||||||||||||||||||
Sbjct: 40104 aagcggacgaagaggaggag 40123



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>dbj|AB040971.2| Homo sapiens mRNA for KIAA1538 protein, partial cds
          Length = 5851

 Score = 40.1 bits (20), Expect = 2.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 163  ggacgaagaggaggaggacg 182
            ||||||||||||||||||||
Sbjct: 2164 ggacgaagaggaggaggacg 2183


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,954,046
Number of Sequences: 3902068
Number of extensions: 1954046
Number of successful extensions: 207499
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 206578
Number of HSP's gapped (non-prelim): 920
length of query: 226
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 204
effective length of database: 17,147,199,772
effective search space: 3498028753488
effective search space used: 3498028753488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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