Clone Name | rbart59d07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsi... | 32 | 0.54 | 2 | PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic... | 29 | 2.7 | 3 | PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic... | 29 | 2.7 | 4 | PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic... | 29 | 3.5 |
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>PIP13_ORYSA (Q9SXF8) Aquaporin PIP 1.3 (Plasma membrane intrinsic protein 1.3)| (OsPIP1.3) (Water channel protein RWC3) (RWC-3) Length = 288 Score = 31.6 bits (70), Expect = 0.54 Identities = 14/14 (100%), Positives = 14/14 (100%) Frame = -1 Query: 288 HVVVIRAIPFKSRD 247 HVVVIRAIPFKSRD Sbjct: 275 HVVVIRAIPFKSRD 288
>PIP11_VICFA (P61838) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = -1 Query: 288 HVVVIRAIPFKSR 250 HVVVIRAIPFKSR Sbjct: 273 HVVVIRAIPFKSR 285
>PIP11_ARATH (P61837) Aquaporin PIP1.1 (Plasma membrane intrinsic protein 1a)| (PIP1a) (Aquaporin 1) (Plasma membrane aquaporin 1) Length = 286 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = -1 Query: 288 HVVVIRAIPFKSR 250 HVVVIRAIPFKSR Sbjct: 273 HVVVIRAIPFKSR 285
>PIP12_ARATH (Q06611) Aquaporin PIP1.2 (Plasma membrane intrinsic protein 1b)| (PIP1b) (Transmembrane protein A) (TMP-A) (AthH2) Length = 286 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/13 (92%), Positives = 13/13 (100%) Frame = -1 Query: 288 HVVVIRAIPFKSR 250 HV+VIRAIPFKSR Sbjct: 273 HVIVIRAIPFKSR 285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,069,013 Number of Sequences: 219361 Number of extensions: 788881 Number of successful extensions: 1926 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1888 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1926 length of database: 80,573,946 effective HSP length: 71 effective length of database: 64,999,315 effective search space used: 1559983560 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)