Clone Name | rbart59d07 |
---|---|
Clone Library Name | barley_pub |
>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds Length = 1248 Score = 91.7 bits (46), Expect = 1e-15 Identities = 46/46 (100%) Strand = Plus / Minus Query: 243 actagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 actagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 897
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds Length = 1285 Score = 75.8 bits (38), Expect = 7e-11 Identities = 44/46 (95%) Strand = Plus / Minus Query: 243 actagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 ||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 957 actagccgcggctcttgaaggggatcgccctgatcaccaccacgtg 912
>ref|XM_468463.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1319 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 245 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 1018 tagtcccggctcttgaaggggattgctctgatcaccaccacgtg 975
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 245 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 35369413 tagtcccggctcttgaaggggattgctctgatcaccaccacgtg 35369370
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 245 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 29961 tagtcccggctcttgaaggggattgctctgatcaccaccacgtg 29918
>dbj|AK102174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086K14, full insert sequence Length = 1318 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 245 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 1017 tagtcccggctcttgaaggggattgctctgatcaccaccacgtg 974
>dbj|AB029325.1| Oryza sativa gene for water channel protein RWC3, promoter region and complete cds Length = 5325 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 245 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 4916 tagtcccggctcttgaaggggattgctctgatcaccaccacgtg 4873
>dbj|AB016623.1| Oryza sativa gene for RWC-3, complete cds Length = 1403 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 245 tagtcgcggctcttgaaggggatggccctgatcaccaccacgtg 288 ||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 995 tagtcccggctcttgaaggggattgctctgatcaccaccacgtg 952
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcgctc 98 |||||||||||||||||||||||||| Sbjct: 111061 acacacacacgctcgctcgctcgctc 111036
>gb|AC104278.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1345_B12, complete sequence Length = 119909 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcgctc 98 |||||||||||||||||||||||||| Sbjct: 25253 acacacacacgctcgctcgctcgctc 25228
>gb|AC126262.4| Mus musculus BAC clone RP23-359F12 from chromosome 12, complete sequence Length = 208710 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 73 acacacacacgctcgctcgctcgctc 98 |||||||||||||||||||||||||| Sbjct: 138231 acacacacacgctcgctcgctcgctc 138256
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcgctc 98 |||||||||||||||||||||||||| Sbjct: 26872821 acacacacacgctcgctcgctcgctc 26872796
>ref|NM_014978.1| Homo sapiens sortilin-related VPS10 domain containing receptor 3 (SORCS3), mRNA Length = 5757 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 72 tacacacacacgctcgctcgctcgc 96 ||||||||||||||||||||||||| Sbjct: 118 tacacacacacgctcgctcgctcgc 142
>gb|AY491806.1| Euphydryas aurinia clone EA26 microsatellite sequence Length = 429 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Minus Query: 75 acacacacgctcgctcgctcgctca 99 ||||||||||||||||||||||||| Sbjct: 315 acacacacgctcgctcgctcgctca 291
>emb|AL355350.8| Human DNA sequence from clone RP11-483B5 on chromosome 10 Contains two novel genes, the 5'end of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3) and a CpG island, complete sequence Length = 153764 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 72 tacacacacacgctcgctcgctcgc 96 ||||||||||||||||||||||||| Sbjct: 85719 tacacacacacgctcgctcgctcgc 85743
>emb|AL161646.10| Human DNA sequence from clone RP11-127O4 on chromosome 10 Contains two novel genes, the 5'end of the gene for VPS10 domain receptor protein SORCS 3 (SORCS3) and one CpG island, complete sequence Length = 183833 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 72 tacacacacacgctcgctcgctcgc 96 ||||||||||||||||||||||||| Sbjct: 171862 tacacacacacgctcgctcgctcgc 171886
>dbj|AB028982.1| Homo sapiens mRNA for KIAA1059 protein, complete cds Length = 5757 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 72 tacacacacacgctcgctcgctcgc 96 ||||||||||||||||||||||||| Sbjct: 118 tacacacacacgctcgctcgctcgc 142
>dbj|AB100870.1| Malus x domestica MdPIP1b mRNA for plasma membrane intrinsic protein, complete cds Length = 1223 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 256 cttgaaggggatggccctgatcaccaccacgtg 288 |||||| ||||||||||||||||| |||||||| Sbjct: 944 cttgaaagggatggccctgatcacaaccacgtg 912
>dbj|AB100869.1| Malus x domestica MdPIP1a mRNA for plasma membrane intrinsic protein, complete cds Length = 1260 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 256 cttgaaggggatggccctgatcaccaccacgtg 288 |||||| ||||||||||||||||| |||||||| Sbjct: 948 cttgaaagggatggccctgatcacaaccacgtg 916
>gb|AF067184.1|AF067184 Samanea saman aquaporin 1 (Aqp1) mRNA, complete cds Length = 1298 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 256 cttgaaggggatggccctgatcaccaccacgtg 288 ||||||||| ||||||||||||||||| ||||| Sbjct: 916 cttgaagggaatggccctgatcaccacgacgtg 884
>dbj|AB058679.1| Pyrus communis Py-PIP1-1 mRNA for plasma membrane intrinsic protein 1-1, complete cds Length = 1351 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 256 cttgaaggggatggccctgatcaccaccacgtg 288 |||||| ||||||||||||||||| |||||||| Sbjct: 1085 cttgaaagggatggccctgatcacaaccacgtg 1053
>gb|AC104538.2| Homo sapiens chromosome 19 clone CTB-66B24, complete sequence Length = 54423 Score = 48.1 bits (24), Expect = 0.015 Identities = 24/24 (100%) Strand = Plus / Minus Query: 76 cacacacgctcgctcgctcgctca 99 |||||||||||||||||||||||| Sbjct: 49593 cacacacgctcgctcgctcgctca 49570
>gb|AC186368.1| Pan troglodytes chromosome 7 clone CH251-329G12, complete sequence Length = 146205 Score = 46.1 bits (23), Expect = 0.061 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 acaacactgaaagatacacacac 80 ||||||||||||||||||||||| Sbjct: 91606 acaacactgaaagatacacacac 91628
>emb|AL359273.11| Human DNA sequence from clone RP11-376N17 on chromosome 1 Contains the gene for dnaj-like protein (LOC148418), the urate oxidase (UOX) pseudogene, a novel pseudogene and the gene for DNase II-like acid DNase (DLAD), complete sequence Length = 205034 Score = 46.1 bits (23), Expect = 0.061 Identities = 23/23 (100%) Strand = Plus / Plus Query: 58 acaacactgaaagatacacacac 80 ||||||||||||||||||||||| Sbjct: 119566 acaacactgaaagatacacacac 119588
>emb|AJ271796.1|ZMA271796 Zea mays mRNA for plasma membrane intrinsic protein (pip4 gene) Length = 1364 Score = 46.1 bits (23), Expect = 0.061 Identities = 29/31 (93%) Strand = Plus / Minus Query: 246 agtcgcggctcttgaaggggatggccctgat 276 |||||||||||||||| |||| ||||||||| Sbjct: 946 agtcgcggctcttgaaagggagggccctgat 916
>emb|BX548248.9| Zebrafish DNA sequence from clone DKEY-245P14 in linkage group 1, complete sequence Length = 173643 Score = 46.1 bits (23), Expect = 0.061 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcg 95 ||||||||||||||||||||||| Sbjct: 91070 acacacacacgctcgctcgctcg 91048
>gb|AF326489.1|AF326489 Zea mays plasma membrane integral protein ZmPIP1-5 mRNA, complete cds Length = 1338 Score = 46.1 bits (23), Expect = 0.061 Identities = 29/31 (93%) Strand = Plus / Minus Query: 246 agtcgcggctcttgaaggggatggccctgat 276 |||| |||||||||||||||| ||||||||| Sbjct: 937 agtcacggctcttgaaggggagggccctgat 907
>emb|BX530412.8| Zebrafish DNA sequence from clone DKEY-42F6 in linkage group 4, complete sequence Length = 218203 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcgctca 99 ||||||||| ||||||||||||||||| Sbjct: 110228 acacacacatgctcgctcgctcgctca 110202
>emb|BX649324.3| Zebrafish DNA sequence from clone DKEY-85M15 in linkage group 4, complete sequence Length = 218137 Score = 46.1 bits (23), Expect = 0.061 Identities = 26/27 (96%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcgctca 99 ||||||||| ||||||||||||||||| Sbjct: 109740 acacacacatgctcgctcgctcgctca 109714
>gb|AY107675.1| Zea mays PCO112712 mRNA sequence Length = 791 Score = 46.1 bits (23), Expect = 0.061 Identities = 29/31 (93%) Strand = Plus / Minus Query: 246 agtcgcggctcttgaaggggatggccctgat 276 |||| |||||||||||||||| ||||||||| Sbjct: 370 agtcacggctcttgaaggggagggccctgat 340
>gb|AC131671.3| Mus musculus BAC clone RP23-312H8 from chromosome 3, complete sequence Length = 195851 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 57 gacaacactgaaagatacacacacac 82 |||||||| ||||||||||||||||| Sbjct: 159278 gacaacacagaaagatacacacacac 159253
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 acacacgctcgctcgctcgctc 98 |||||||||||||||||||||| Sbjct: 20645192 acacacgctcgctcgctcgctc 20645171
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0024F24 Length = 172642 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 acacacgctcgctcgctcgctc 98 |||||||||||||||||||||| Sbjct: 107168 acacacgctcgctcgctcgctc 107147
>emb|BX296535.7| Zebrafish DNA sequence from clone CH211-234I2, complete sequence Length = 163120 Score = 44.1 bits (22), Expect = 0.24 Identities = 22/22 (100%) Strand = Plus / Plus Query: 222 attccatggctgattgagtata 243 |||||||||||||||||||||| Sbjct: 50610 attccatggctgattgagtata 50631
>ref|XM_521598.1| PREDICTED: Pan troglodytes similar to bA127O4.1 (KIAA1059 protein) (LOC466196), mRNA Length = 2466 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 72 tacacacacacgctcgctcgctcgc 96 ||||||||| ||||||||||||||| Sbjct: 1304 tacacacactcgctcgctcgctcgc 1328
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cacacgctcgctcgctcgctc 98 ||||||||||||||||||||| Sbjct: 102172 cacacgctcgctcgctcgctc 102152
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence Length = 219629 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 cacacgctcgctcgctcgctc 98 ||||||||||||||||||||| Sbjct: 24868 cacacgctcgctcgctcgctc 24848
>gb|AC004849.1| Homo sapiens PAC clone RP4-659J6 from 7, complete sequence Length = 126801 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgct 93 ||||||||||||||||||||| Sbjct: 10108 acacacacacgctcgctcgct 10088
>gb|AC020915.6|AC020915 Homo sapiens chromosome 19 clone CTD-3138B18, complete sequence Length = 160852 Score = 42.1 bits (21), Expect = 0.95 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 catccattccatggctgattg 237 ||||||||||||||||||||| Sbjct: 47541 catccattccatggctgattg 47561
>emb|CT025539.18| Mouse DNA sequence from clone RP23-221K23 on chromosome 12, complete sequence Length = 167603 Score = 42.1 bits (21), Expect = 0.95 Identities = 24/25 (96%) Strand = Plus / Plus Query: 73 acacacacacgctcgctcgctcgct 97 |||||||||||| |||||||||||| Sbjct: 89328 acacacacacgcacgctcgctcgct 89352
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tgaaagatacacacacacgc 84 |||||||||||||||||||| Sbjct: 111426 tgaaagatacacacacacgc 111407
>ref|XM_633657.1| Dictyostelium discoideum hypothetical protein (DDB0185844), partial mRNA Length = 1902 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 aaatgatggttgatgaacaa 201 |||||||||||||||||||| Sbjct: 849 aaatgatggttgatgaacaa 830
>gb|BT018400.1| Zea mays clone EL01N0323H01.d mRNA sequence Length = 1154 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 820 gctcttgaacgggatggccctgat 797
>gb|AC135599.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0045P14, complete sequence Length = 121894 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 acacacacgctcgctcgctcgctc 98 |||||| ||||||||||||||||| Sbjct: 80167 acacacgcgctcgctcgctcgctc 80190
>gb|DQ207683.1| Zea mays cultivar inbred line Mo17 IDP251 marker Length = 824 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 258 gctcttgaacgggatggccctgat 281
>gb|DQ207682.1| Zea mays cultivar B73 IDP251 marker Length = 763 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 519 gctcttgaacgggatggccctgat 496
>gb|AC145905.4| Pan troglodytes BAC clone RP43-9I21 from 7, complete sequence Length = 187893 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 acaacactgaaagatacacacaca 81 |||| ||||||||||||||||||| Sbjct: 101375 acaaaactgaaagatacacacaca 101352
>emb|AJ312850.1|RSE312850 Rhodeus sericeus microsatellite DNA Rser 10, clone BITT2E01 Length = 264 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cacacacgctcgctcgctcgctca 99 ||||||||| |||||||||||||| Sbjct: 57 cacacacgcgcgctcgctcgctca 34
>gb|AC122832.4| Mus musculus BAC clone RP23-179D3 from 12, complete sequence Length = 224056 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 actgaaagatacacacacac 82 |||||||||||||||||||| Sbjct: 57604 actgaaagatacacacacac 57585
>ref|XM_948657.1| Theileria annulata strain Ankara hypothetical protein (TA16895) partial mRNA Length = 1734 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 265 gatggccctgatcaccacca 284 |||||||||||||||||||| Sbjct: 760 gatggccctgatcaccacca 741
>emb|AL445673.9| Human DNA sequence from clone RP1-45C12 on chromosome 1 Contains part of the FMO1 gene for flavin containing monooxygenase 1 and the 5' end of a novel gene, complete sequence Length = 13892 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccatccattccatggctga 234 |||||||||||||||||||| Sbjct: 5537 tccatccattccatggctga 5556
>emb|AL162455.14| Human DNA sequence from clone RP11-62D23 on chromosome 13 Contains part of the GPC6 gene for glypican 6 and a novel gene, complete sequence Length = 173736 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 acaacactgaaagatacaca 77 |||||||||||||||||||| Sbjct: 132503 acaacactgaaagatacaca 132484
>emb|X87608.2|RPNODHPQG Rhizobium tropici nodI, nodJ, nodH, nodP and nodQ genes, and ORF1 for putative aldo-keto reductase Length = 6013 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 acacgctcgctcgctcgctc 98 |||||||||||||||||||| Sbjct: 3021 acacgctcgctcgctcgctc 3040
>emb|BX548059.13| Zebrafish DNA sequence from clone DKEYP-80D11 in linkage group 12, complete sequence Length = 205581 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 acacacacacgctcgctcgc 92 |||||||||||||||||||| Sbjct: 176269 acacacacacgctcgctcgc 176288
>emb|BX572625.7| Zebrafish DNA sequence from clone CH211-192O15 in linkage group 12, complete sequence Length = 155592 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 aacgtagacaacactgaaag 70 |||||||||||||||||||| Sbjct: 67604 aacgtagacaacactgaaag 67585
>dbj|AB242853.1| Quercus mongolica var. crispula DNA, microsatellite marker: bcqm76 Length = 396 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ttccatggctgattgagtat 242 |||||||||||||||||||| Sbjct: 255 ttccatggctgattgagtat 274
>dbj|AK128557.1| Homo sapiens cDNA FLJ46716 fis, clone TRACH3018108, highly similar to 51 kDa FK506-binding protein Length = 3530 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cacgctcgctcgctcgctca 99 |||||||||||||||||||| Sbjct: 50 cacgctcgctcgctcgctca 31
>gb|AF390559.1|AF390559 Sphyraena idiastes cytosolic malate dehydrogenase thermostable form (cMDH-S) mRNA, complete cds Length = 1474 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcgc 96 |||||||||| ||||||||||||| Sbjct: 1266 acacacacacactcgctcgctcgc 1243
>emb|BX001037.13| Zebrafish DNA sequence from clone DKEY-107I16 in linkage group 6, complete sequence Length = 92347 Score = 40.1 bits (20), Expect = 3.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 57 gacaacactgaaagatacacacacacgc 84 ||||||||||| ||| |||||||||||| Sbjct: 9761 gacaacactgagagacacacacacacgc 9734
>gb|AY714380.1| Aegiceras corniculatum aquaporin 1 mRNA, partial cds Length = 534 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cttgaaggggatggccctgatcac 279 ||||||||| |||||||||||||| Sbjct: 528 cttgaagggtatggccctgatcac 505
>gb|AY671949.1| Aegiceras corniculatum aquaporin 1 (PIP1) mRNA, complete cds Length = 867 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 cttgaaggggatggccctgatcac 279 ||||||||| |||||||||||||| Sbjct: 858 cttgaagggtatggccctgatcac 835
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 acacacacgctcgctcgctcgctc 98 |||||| ||||||||||||||||| Sbjct: 10890647 acacacgcgctcgctcgctcgctc 10890670
>gb|AF326490.1|AF326490 Zea mays plasma membrane integral protein ZmPIP1-6 mRNA, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 cttgaaggggatggccctga 275 |||||||||||||||||||| Sbjct: 1074 cttgaaggggatggccctga 1055
>gb|AF326488.1|AF326488 Zea mays plasma membrane integral protein ZmPIP1-4 mRNA, complete cds Length = 1153 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 970 gctcttgaacgggatggccctgat 947
>gb|AF326487.1|AF326487 Zea mays plasma membrane integral protein ZmPIP1-3 mRNA, complete cds Length = 1296 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 965 gctcttgaacgggatggccctgat 942
>dbj|AB206098.1| Mimosa pudica pip1;1 mRNA for plasma membrane intrinsic protein 1;1, complete cds Length = 1096 Score = 40.1 bits (20), Expect = 3.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 257 ttgaaggggatggccctgatcaccaccacgtg 288 ||||| || ||||||||||||||||| ||||| Sbjct: 933 ttgaatggaatggccctgatcaccacgacgtg 902
>ref|XM_574724.1| PREDICTED: Rattus norvegicus FK506 binding protein 5 (predicted) (Fkbp5_predicted), mRNA Length = 3571 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cacgctcgctcgctcgctca 99 |||||||||||||||||||| Sbjct: 93 cacgctcgctcgctcgctca 74
>gb|AY170841.1| Axonopus compressus plasma membrane MIP protein mRNA, partial cds Length = 423 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 414 gctcttgaacgggatggccctgat 391
>gb|AC008080.1|AC008080 Homo sapiens clone RP11-89N17 from 7p14-15, complete sequence Length = 178635 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 58 acaacactgaaagatacacacaca 81 |||| ||||||||||||||||||| Sbjct: 51257 acaaaactgaaagatacacacaca 51234
>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence Length = 257730 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 tgaaagatacacacacacgc 84 |||||||||||||||||||| Sbjct: 65479 tgaaagatacacacacacgc 65460
>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds Length = 13081 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 atacacacacacgctcgctc 90 |||||||||||||||||||| Sbjct: 1608 atacacacacacgctcgctc 1589
>emb|BX255922.4| Zebrafish DNA sequence from clone CH211-125A15 in linkage group 4, complete sequence Length = 155429 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 acacacacacgctcgctcgctcgc 96 |||||||||| ||||||||||||| Sbjct: 56212 acacacacacactcgctcgctcgc 56235
>emb|BX936317.16| Zebrafish DNA sequence from clone CH211-208C9 in linkage group 20, complete sequence Length = 208051 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 acacacacacgctcgctcgctcgc 96 |||||||||||| ||||||||||| Sbjct: 140703 acacacacacgcacgctcgctcgc 140680
>emb|BX005062.4| Zebrafish DNA sequence from clone CH211-95I5 in linkage group 19, complete sequence Length = 170213 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 acacacacgctcgctcgctcgctc 98 |||||||| ||||||||||||||| Sbjct: 138891 acacacacactcgctcgctcgctc 138914
>gb|AY103580.1| Zea mays PCO072544 mRNA sequence Length = 1633 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 1294 gctcttgaacgggatggccctgat 1271
>emb|CR760784.2| Xenopus tropicalis finished cDNA, clone TTpA011k06 Length = 2149 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 tttgcacattttggggaggt 24 |||||||||||||||||||| Sbjct: 1355 tttgcacattttggggaggt 1336
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 acacacacgctcgctcgctcgctc 98 |||||| ||||||||||||||||| Sbjct: 10969836 acacacgcgctcgctcgctcgctc 10969859
>gb|U87981.1|SBU87981 Sorghum bicolor membrane intrinsic protein (Mip1) mRNA, partial cds Length = 539 Score = 40.1 bits (20), Expect = 3.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 253 gctcttgaaggggatggccctgat 276 ||||||||| |||||||||||||| Sbjct: 346 gctcttgaacgggatggccctgat 323
>gb|U47272.1|RTU47272 Rhizobium tropici nodulation protein nodH, nodP and nodQ genes, complete cds Length = 4042 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 acacgctcgctcgctcgctc 98 |||||||||||||||||||| Sbjct: 1050 acacgctcgctcgctcgctc 1069
>gb|AY879266.1| Homo sapiens flavin containing monooxygenase 1 (FMO1) gene, complete cds Length = 38506 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tccatccattccatggctga 234 |||||||||||||||||||| Sbjct: 4162 tccatccattccatggctga 4181 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,842,044 Number of Sequences: 3902068 Number of extensions: 2842044 Number of successful extensions: 56486 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56244 Number of HSP's gapped (non-prelim): 238 length of query: 288 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 266 effective length of database: 17,147,199,772 effective search space: 4561155139352 effective search space used: 4561155139352 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)