ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59d02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 115 4e-26
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 60 1e-09
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 45 4e-05
4CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 45 5e-05
5CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 40 0.002
6CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 39 0.003
7CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 38 0.006
8CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.010
9CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.013
10CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 33 0.19
11CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 33 0.19
12CONB_CANEN (P49347) Concanavalin B precursor (Con B) 31 0.93
13CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 30 1.2
14CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel al... 28 4.6

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score =  115 bits (287), Expect = 4e-26
 Identities = 51/54 (94%), Positives = 53/54 (98%)
 Frame = -3

Query: 287 LTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 126
           LTADDKS+QWVHPKNVYY VAPV+QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA
Sbjct: 251 LTADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 60.1 bits (144), Expect = 1e-09
 Identities = 24/41 (58%), Positives = 30/41 (73%)
 Frame = -3

Query: 248 KNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 126
           K +YY + P  QK  NYGGIMLWDR++DKQT Y   +KY+A
Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 16/47 (34%), Positives = 30/47 (63%)
 Frame = -3

Query: 287 LTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYS 147
           + + ++   W+  K++YY +    +   NYGG+ ++DRYFDK+ NY+
Sbjct: 241 VASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = -3

Query: 251 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 135
           P NV  S + PV ++   YGG+MLW +Y+D Q+ YSS IK
Sbjct: 259 PANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSSSIK 298



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 251 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 135
           PK V  S V P  +    YGG+MLW+R FD Q  YSS I+
Sbjct: 252 PKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSSAIR 291



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -3

Query: 230 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 135
           V P  +    YGG+M+WDR+ D Q+ YS+ IK
Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSNAIK 290



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = -3

Query: 260 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 138
           +V P  +   + P  +K   YGG+MLW +++D +  YSS I
Sbjct: 255 YVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSSSI 295



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -3

Query: 260 WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 138
           ++ P  +   + P  +K   YGG+MLW +++D +  YSS I
Sbjct: 258 YIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSI 298



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 230 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLI 138
           V P  +    YGG+MLWDR+ D Q+ YS  I
Sbjct: 264 VLPTIKGSSKYGGVMLWDRFNDGQSGYSGAI 294



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 251 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 135
           P +V  S V P+      YGG+MLW +++D    YSS IK
Sbjct: 251 PSDVLVSQVLPLINGSPKYGGVMLWSKFYD--NGYSSAIK 288



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 33.1 bits (74), Expect = 0.19
 Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -3

Query: 251 PKNVYYS-VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 135
           P +V  S V P  +   NYGG+MLW + FD    YS  IK
Sbjct: 251 PADVLISQVLPTIKASSNYGGVMLWSKAFD--NGYSDSIK 288



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 260 WVHPKNVYYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 132
           ++ P  +   V P +   +  Y GI LW+R  DK+T YS ++I+Y
Sbjct: 263 YIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -3

Query: 230 VAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIK 135
           V P  +    YGG+MLW + +D  + YSS IK
Sbjct: 261 VLPTIKGSAKYGGVMLWSKAYD--SGYSSAIK 290



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>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 17/33 (51%), Positives = 17/33 (51%)
 Frame = +2

Query: 173  TGPRA*CRRSCPSSATPARRCSRRSWGVPTGRT 271
            TGPRA C R   SS  PARR   R    PT  T
Sbjct: 968  TGPRA-CPREAESSEEPARRHRARHKAPPTQET 999


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,044,156
Number of Sequences: 219361
Number of extensions: 488752
Number of successful extensions: 1333
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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