ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart59c12 |
|---|---|
| Clone Library Name | barley_pub |
>KLK5_HUMAN (Q9Y337) Kallikrein-5 precursor (EC 3.4.21.-) (Stratum corneum| tryptic enzyme) (Kallikrein-like protein 2) (KLK-L2) Length = 293 Score = 29.3 bits (64), Expect = 2.8 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = -1 Query: 210 YRRLVDDGSIVYCV---SCRISCVG*GGSPALCNGDVR-TVSW 94 Y R +DD ++C + R SC G G P +CNG ++ VSW Sbjct: 221 YPRQIDD--TMFCAGDKAGRDSCQGDSGGPVVCNGSLQGLVSW 261
>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)| (KP) Length = 634 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = +3 Query: 111 HHHYTAQGNHLSPHKKFDKKHNIQWSHHPP 200 HHH+ Q H +PH+ H+ + +H P Sbjct: 66 HHHHQHQHQHQAPHQAHHHHHHGEVNHQAP 95
>KNOB_PLAFN (P06719) Knob-associated histidine-rich protein precursor (KAHRP)| Length = 657 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = +3 Query: 111 HHHYTAQGNHLSPHKKFDKKHNIQWSHHPP 200 HHH+ Q H +PH+ H+ + +H P Sbjct: 70 HHHHQHQAPHQAPHQAHHHHHHGEVNHQAP 99
>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)| (HRPI) (Fragment) Length = 473 Score = 28.9 bits (63), Expect = 3.6 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = +3 Query: 111 HHHYTAQGNHLSPHKKFDKKHNIQWSHHPP 200 HHH+ Q H +PH+ H+ + +H P Sbjct: 66 HHHHQHQHQHQAPHQAHHHHHHGEVNHQAP 95
>SSAA_STAES (Q7CCJ3) Staphylococcal secretory antigen ssaA precursor| Length = 257 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +1 Query: 34 RTTQPTSGQSH*HPTKSASYPAHGTYITITQRRGTTLAHTRNSTRNTIYNG 186 RTTQPT G + T S++ H T + G +L++ R+++ N +G Sbjct: 111 RTTQPTGGLGASYSTSSSN--VHVTTTSAPSSNGVSLSNARSASGNLYTSG 159
>SSAA_STAEQ (Q5HLV2) Staphylococcal secretory antigen ssaA precursor| Length = 257 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +1 Query: 34 RTTQPTSGQSH*HPTKSASYPAHGTYITITQRRGTTLAHTRNSTRNTIYNG 186 RTTQPT G + T S++ H T + G +L++ R+++ N +G Sbjct: 111 RTTQPTGGLGASYSTSSSN--VHVTTTSAPSSNGVSLSNARSASGNLYTSG 159
>SSAA_STAEP (Q9KJT6) Staphylococcal secretory antigen ssaA precursor| Length = 257 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/51 (31%), Positives = 27/51 (52%) Frame = +1 Query: 34 RTTQPTSGQSH*HPTKSASYPAHGTYITITQRRGTTLAHTRNSTRNTIYNG 186 RTTQPT G + T S++ H T + G +L++ R+++ N +G Sbjct: 111 RTTQPTGGLGASYSTSSSN--VHVTTTSAPSSNGVSLSNARSASGNLYTSG 159
>PHOSP_PI1HE (P32532) Phosphoprotein (Protein P)| Length = 568 Score = 28.5 bits (62), Expect = 4.7 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +1 Query: 28 VHRTTQPTSGQSH*HPTKSASY--PAHGTYITITQRRGTTLAHTRNSTRNTIYNGAIIHQ 201 +H++T S H TK++ P+ +TQ+ T+++T N N + Sbjct: 249 LHKSTSGDSSNLEDHNTKTSQKIPPSKNEEPAVTQKNNHNHRKTKHTTNNANNNAKCLPT 308 Query: 202 PTIDTTA 222 P DTT+ Sbjct: 309 PEHDTTS 315
>PURL_SYMTH (Q67KF8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 778 Score = 28.1 bits (61), Expect = 6.2 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = +1 Query: 52 SGQSH*HPTKSASYPAHGTYITITQRRGTTLAHTRNSTRNTIYNGA 189 SGQ+ +AS +G Y+ + RRGT +A + RN + GA Sbjct: 467 SGQAGPPKGIAASVDCNGRYVYLNPRRGTAIA-VAEAARNCVVTGA 511
>NCLN_HUMAN (Q969V3) Nicalin precursor (Nicastrin-like protein)| Length = 563 Score = 28.1 bits (61), Expect = 6.2 Identities = 13/39 (33%), Positives = 23/39 (58%) Frame = +3 Query: 135 NHLSPHKKFDKKHNIQWSHHPPAYDRYDGLLFLLQAYRL 251 +HLS + K K+H+++ P + YD L ++ AYR+ Sbjct: 481 HHLSRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRV 519
>UL04_EHV1V (P84457) Gene 58 protein| Length = 225 Score = 28.1 bits (61), Expect = 6.2 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 195 DDGSIVYCVSCRISCVG*GGSPALCNGDVRTVSWIASRFSWMLVRL--PACGLCSSVYC 25 +DGS++ C CVG +G V T+SW S+ +++ V + P C ++ C Sbjct: 96 EDGSVLVVPFCGWVCVGRDRCLRSMSGGVLTISWDTSQTAYISVAVYRPPTLQCHALDC 154
>UL04_EHV1B (P28943) Gene 58 protein| Length = 225 Score = 28.1 bits (61), Expect = 6.2 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%) Frame = -1 Query: 195 DDGSIVYCVSCRISCVG*GGSPALCNGDVRTVSWIASRFSWMLVRL--PACGLCSSVYC 25 +DGS++ C CVG +G V T+SW S+ +++ V + P C ++ C Sbjct: 96 EDGSVLVVPFCGWVCVGRDRCLRSMSGGVLTISWDTSQTAYISVAVYRPPTLQCHALDC 154
>VSP3_TRIMU (Q91509) Mucrofibrase-3 precursor (EC 3.4.21.-)| Length = 257 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = -1 Query: 156 SCVG*GGSPALCNGDVR-TVSW 94 SCVG G P +CNG + VSW Sbjct: 198 SCVGDSGGPLICNGQFQGIVSW 219
>VSP1_TRIMU (Q91507) Mucrofibrase-1 precursor (EC 3.4.21.-)| Length = 257 Score = 27.7 bits (60), Expect = 8.1 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = -1 Query: 156 SCVG*GGSPALCNGDVR-TVSW 94 SCVG G P +CNG + VSW Sbjct: 198 SCVGDSGGPLICNGQFQGIVSW 219
>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor| Length = 351 Score = 27.7 bits (60), Expect = 8.1 Identities = 14/61 (22%), Positives = 22/61 (36%) Frame = +3 Query: 12 SHTHHSTQNYTTHKRAVALTSN*IC*LSSSRYVHHHYTAQGNHLSPHKKFDKKHNIQWSH 191 +H HH +++ H A + HHH+ +H +PH H H Sbjct: 140 AHHHHHEEHHHHHHAA-----------HHHPWFHHHHLGYHHHHAPHHHHHHHHAPHHHH 188 Query: 192 H 194 H Sbjct: 189 H 189
>TCT1_PHYPO (O61063) Tectonin-1 (Tectonin I)| Length = 216 Score = 27.7 bits (60), Expect = 8.1 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +3 Query: 114 HHYTAQGNHLSPHKKFDKKHNIQWSHHPPAYDRYDGLL 227 HH+ NHL H +W HH +D+ DG L Sbjct: 91 HHHVWGVNHLD--------HIYKWDHHHNKWDKIDGAL 120
>CTRB_GADMO (P80646) Chymotrypsin B (EC 3.4.21.1) [Contains: Chymotrypsin B| chain A; Chymotrypsin B chain B] Length = 245 Score = 27.7 bits (60), Expect = 8.1 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 5/64 (7%) Frame = -1 Query: 252 AIDKPAKEKVSRRIYRRLVDDGSIVYCVSCRISCVG*GGSPALCNGD-----VRTVSWIA 88 A+ + E+ S+ ++ D I + SC+G G P +C D V VSW + Sbjct: 158 ALPLMSNEECSQTWGNNMISDVMICAGAAGATSCMGDSGGPLVCQKDNVWTLVGIVSWGS 217 Query: 87 SRFS 76 SR S Sbjct: 218 SRCS 221 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,167,210 Number of Sequences: 219361 Number of extensions: 786165 Number of successful extensions: 2453 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 2359 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2426 length of database: 80,573,946 effective HSP length: 62 effective length of database: 66,973,564 effective search space used: 1607365536 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
