>AT11C_HUMAN (Q8NB49) Probable phospholipid-transporting ATPase IG (EC 3.6.3.1)|
            (ATPase class I type 11C) (ATPase IG) (ATPase IQ) (ATPase
            class VI type 11C)
          Length = 1132

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = -3

Query: 106  YFFFLRIPRYITTWVYVLLCLFVSLFPRV 20
            YF F ++   ++TW+ ++L +F+SLFP +
Sbjct: 1057 YFVFAQMLSSVSTWLAIILLIFISLFPEI 1085

>AT11C_MOUSE (Q9QZW0) Probable phospholipid-transporting ATPase 11C (EC 3.6.3.1)|
           (Fragment)
          Length = 347

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = -3

Query: 106 YFFFLRIPRYITTWVYVLLCLFVSLFPRV 20
           YF F ++   ++TW+ ++L +F+SLFP +
Sbjct: 285 YFVFAQMLCSVSTWLAIILLIFISLFPEI 313

>RT03_ACACA (P46754) Mitochondrial ribosomal protein S3|
          Length = 298

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -3

Query: 184 FGRLITLVNLFPVLCVMRDV*CSAISYFFFLRIPRYITTW 65
           F R   L  +F +     +V  + IS FFF+R+ +Y T W
Sbjct: 169 FSRSSFLSKIFIIGLSKMNVNANIISEFFFIRLTQYYTIW 208

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 90   RRKKK*EMAEHYTSRITHSTGNRLTKVIKRPNQPGAGRRYVR 215
            R++ K       T+R+ +   +R+ K ++R N P AG  +VR
Sbjct: 1319 RKENKFSAKRLQTTRLGNHLEDRVNKFLRRQNHPEAGEVFVR 1360

>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +3

Query: 90   RRKKK*EMAEHYTSRITHSTGNRLTKVIKRPNQPGAGRRYVR 215
            R++ K       T+R+ +   +R+ K ++R N P AG  +VR
Sbjct: 1320 RKENKFSAKRLQTTRLGNHLEDRVNKFLRRQNHPEAGEVFVR 1361

>NU5M_ANOQU (P33510) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 576

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 105 TFFSFVFHVTLPLGFMYCFVYLLVYFRGSGDYTSS 1
           +FF F F      G   C+ + LVY+  +GD+ SS
Sbjct: 377 SFFLFFFST----GLTVCYSFRLVYYSMTGDFNSS 407

>NU5M_ANOGA (P34854) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 580

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 105 TFFSFVFHVTLPLGFMYCFVYLLVYFRGSGDYTSS 1
           +FF F F      G   C+ + LVY+  +GD+ SS
Sbjct: 381 SFFLFFFST----GLTVCYSFRLVYYSMTGDFNSS 411

>M130_STRPU (P08472) Mesenchyme-specific cell surface glycoprotein precursor|
           (MSP130)
          Length = 779

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 38  NK*TKQYINPSGNVTWNTKEKKVGNGRALHVTHHT 142
           N  TK+Y+NP G +T       V NG +  + + T
Sbjct: 202 NNYTKKYVNPEGTITTVRLAGSVSNGPSQQIVNTT 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,318,327
Number of Sequences: 219361
Number of extensions: 751647
Number of successful extensions: 1682
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1682
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)