>gb|AC124725.3| Mus musculus BAC clone RP23-459F16 from chromosome 2, complete sequence
          Length = 168983

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 33    aaactaacaaataaacaaagcag 55
             |||||||||||||||||||||||
Sbjct: 77392 aaactaacaaataaacaaagcag 77370

>emb|BX294446.6| Mouse DNA sequence from clone RP23-459F16 on chromosome 2, complete
             sequence
          Length = 73907

 Score = 46.1 bits (23), Expect = 0.082
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 33    aaactaacaaataaacaaagcag 55
             |||||||||||||||||||||||
Sbjct: 20845 aaactaacaaataaacaaagcag 20867

>gb|AC125168.4| Mus musculus BAC clone RP24-449N2 from chromosome 3, complete sequence
          Length = 166604

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 29    aaataaactaacaaataaacaaagca 54
             |||||||| |||||||||||||||||
Sbjct: 78394 aaataaacaaacaaataaacaaagca 78369

>gb|AC099414.4| Mus musculus BAC clone RP23-122C18 from 3, complete sequence
          Length = 203057

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 29    aaataaactaacaaataaacaaagca 54
             |||||||| |||||||||||||||||
Sbjct: 11127 aaataaacaaacaaataaacaaagca 11152

>gb|AC139063.11| Mus musculus chromosome 7, clone RP23-73F23, complete sequence
          Length = 202863

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 30    aataaactaacaaataaacaaa 51
             ||||||||||||||||||||||
Sbjct: 60092 aataaactaacaaataaacaaa 60113

>gb|AC074313.29| Mus musculus strain C57BL/6J clone rp23-412j23 map 7, complete sequence
          Length = 199260

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 30     aataaactaacaaataaacaaa 51
              ||||||||||||||||||||||
Sbjct: 152024 aataaactaacaaataaacaaa 152003

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 345     gttcttccacctcgtcgacctcgttctcgc 374
               ||||||| ||||||||||||| ||||||||
Sbjct: 2760563 gttcttcgacctcgtcgaccttgttctcgc 2760592

>gb|AC146610.4| Mus musculus BAC clone RP23-68E7 from chromosome 7, complete sequence
          Length = 218291

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 228   ggttcaggaggcccttgaacc 248
             |||||||||||||||||||||
Sbjct: 52487 ggttcaggaggcccttgaacc 52467

>gb|AC122523.5| Mus musculus BAC clone RP24-492N18 from chromosome 7, complete sequence
          Length = 163841

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 228    ggttcaggaggcccttgaacc 248
              |||||||||||||||||||||
Sbjct: 131891 ggttcaggaggcccttgaacc 131871

>emb|AL445523.11| Human DNA sequence from clone RP11-231N9 on chromosome X Contains a
             karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
             (KPNA2) pseudogene and a chaperonin containing TCP1,
             subunit 4 (delta) (CCT4) pseudogene, complete sequence
          Length = 157946

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    taaactaacaaataaacaaag 52
             |||||||||||||||||||||
Sbjct: 13984 taaactaacaaataaacaaag 13964

>emb|CR847858.15| Zebrafish DNA sequence from clone DKEY-78H3 in linkage group 5,
             complete sequence
          Length = 255113

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 30    aataaactaacaaataaacaa 50
             |||||||||||||||||||||
Sbjct: 61248 aataaactaacaaataaacaa 61228

>emb|BX465863.11| Zebrafish DNA sequence from clone RP71-5C20 in linkage group 5, complete
              sequence
          Length = 117261

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 30     aataaactaacaaataaacaa 50
              |||||||||||||||||||||
Sbjct: 110668 aataaactaacaaataaacaa 110688

>emb|AL670238.5| Mouse DNA sequence from clone RP23-16J5 on chromosome X, complete
             sequence
          Length = 223392

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 27    ggaaataaactaacaaataaacaaa 51
             |||||||||| ||||||||||||||
Sbjct: 56732 ggaaataaacaaacaaataaacaaa 56708

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 157    gattaaccaaagtaattaaac 177
              |||||||||||||||||||||
Sbjct: 320411 gattaaccaaagtaattaaac 320391

>ref|NM_001017003.2| Xenopus tropicalis hypothetical protein LOC549757 (LOC549757), mRNA
          Length = 1754

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 143 cagtacagggaacagattaa 162
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552

>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0004D06, complete sequence
          Length = 157547

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ggcggcggccgccatggctg 304
             ||||||||||||||||||||
Sbjct: 29333 ggcggcggccgccatggctg 29314

>ref|XM_718121.1| Candida albicans SC5314 sugar transporter-like protein
           (CaO19_6005), mRNA
          Length = 2235

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaataaactaacaaataaac 48
           ||||||||||||||||||||
Sbjct: 615 aaataaactaacaaataaac 596

>ref|XM_717974.1| Candida albicans SC5314 sugar transporter-like protein
           (CaO19_13426), mRNA
          Length = 2235

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 29  aaataaactaacaaataaac 48
           ||||||||||||||||||||
Sbjct: 615 aaataaactaacaaataaac 596

>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    gcgccggccggcggtacgta 212
              ||||||||||||||||||||
Sbjct: 472526 gcgccggccggcggtacgta 472507

>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBb0076M06, complete sequence
          Length = 133581

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ggcggcggccgccatggctg 304
              ||||||||||||||||||||
Sbjct: 129150 ggcggcggccgccatggctg 129131

>emb|Z75741.1|HS107N3 Human DNA sequence from clone RP1-107N3 on chromosome X Contains a
            kinesin heavy chain member 2 (KIF2) pseudogene and a
            Huntingtin interacting protein K (HYPK) pseudogene,
            complete sequence
          Length = 174045

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   aaactaacaaataaacaaag 52
            ||||||||||||||||||||
Sbjct: 7207 aaactaacaaataaacaaag 7188

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 29      aaataaactaacaaataaac 48
               ||||||||||||||||||||
Sbjct: 2705854 aaataaactaacaaataaac 2705873

>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01,
             complete sequence
          Length = 133331

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ggcggcggccgccatggctg 304
             ||||||||||||||||||||
Sbjct: 92328 ggcggcggccgccatggctg 92309

>emb|AL592495.1| Zebrafish DNA sequence from clone BUSM1-129I22 in linkage group 22
             Contains a novel gene similar to human and rodent IER5
             (immediately early response 5), the scl gene for stem-cell
             leukemia hematopoietic transcription factor [tal-1 /
             T-cell acute lymphocytic leukemia 1 (TAL1); T-cell acute
             lymphocytic leukemia 1 (Tal1)],  a novel gene, a novel
             gene for a protein similar to human PDZ domain proteins,
             ESTs, STSs, GSSs and two CpG islands.ESTs, STSs, GSSs and
             two CpG islands, complete sequence
          Length = 84543

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    gaaataaactaacaaataaa 47
             ||||||||||||||||||||
Sbjct: 76246 gaaataaactaacaaataaa 76265

>emb|BX321884.15| Zebrafish DNA sequence from clone DKEYP-29A10 in linkage group 3,
             complete sequence
          Length = 173019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    aaataaactaacaaataaac 48
             ||||||||||||||||||||
Sbjct: 94790 aaataaactaacaaataaac 94809

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      ggcggcggccgccatggctg 304
                ||||||||||||||||||||
Sbjct: 34786769 ggcggcggccgccatggctg 34786750

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      ggcggcggccgccatggctg 304
                ||||||||||||||||||||
Sbjct: 26327501 ggcggcggccgccatggctg 26327482

>dbj|AK120361.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067O03, full
           insert sequence
          Length = 3399

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ggcggcggccgccatggctg 304
           ||||||||||||||||||||
Sbjct: 135 ggcggcggccgccatggctg 116

>dbj|AK107890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E06, full
           insert sequence
          Length = 833

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ggcggcggccgccatggctg 304
           ||||||||||||||||||||
Sbjct: 126 ggcggcggccgccatggctg 107

>dbj|AK106728.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H07, full
            insert sequence
          Length = 2386

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 285  ggcggcggccgccatggctg 304
            ||||||||||||||||||||
Sbjct: 2100 ggcggcggccgccatggctg 2119

>dbj|AK105350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-A05, full
           insert sequence
          Length = 1300

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ggcggcggccgccatggctg 304
           ||||||||||||||||||||
Sbjct: 57  ggcggcggccgccatggctg 38

>emb|BX322568.13| Zebrafish DNA sequence from clone DKEY-38N4 in linkage group 22,
             complete sequence
          Length = 134716

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    gaaataaactaacaaataaa 47
             ||||||||||||||||||||
Sbjct: 38354 gaaataaactaacaaataaa 38373

>emb|AL732354.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0901F07, complete
             sequence
          Length = 110682

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   ggcggcggccgccatggctg 304
             ||||||||||||||||||||
Sbjct: 31971 ggcggcggccgccatggctg 31952

>emb|CR762314.2| Xenopus tropicalis finished cDNA, clone TGas109f05
          Length = 1754

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 143 cagtacagggaacagattaa 162
           ||||||||||||||||||||
Sbjct: 533 cagtacagggaacagattaa 552

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      ggcggcggccgccatggctg 304
                ||||||||||||||||||||
Sbjct: 26641759 ggcggcggccgccatggctg 26641740

>emb|BX000479.11| Mouse DNA sequence from clone RP23-139I16 on chromosome X, complete
             sequence
          Length = 145084

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    aaactaacaaataaacaaag 52
             ||||||||||||||||||||
Sbjct: 88779 aaactaacaaataaacaaag 88760

>emb|CT027681.7| Mouse DNA sequence from clone RP24-330H24 on chromosome 16, complete
             sequence
          Length = 190475

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   cctcgccaagcttcctagcc 343
             ||||||||||||||||||||
Sbjct: 20391 cctcgccaagcttcctagcc 20372


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,831,341
Number of Sequences: 3902068
Number of extensions: 2831341
Number of successful extensions: 74356
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74102
Number of HSP's gapped (non-prelim): 254
length of query: 381
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 359
effective length of database: 17,147,199,772
effective search space: 6155844718148
effective search space used: 6155844718148
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)