ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart59c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full... 442 e-121
2ref|XM_479756.1| Oryza sativa (japonica cultivar-group), mRNA 198 8e-48
3ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group... 198 8e-48
4dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for ... 198 8e-48
5gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, compl... 198 8e-48
6dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 8e-48
7dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 8e-48
8dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clon... 198 8e-48
9gb|BT016469.1| Zea mays clone Contig302 mRNA sequence 153 4e-34
10gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds 153 4e-34
11gb|AY112523.1| Zea mays CL966_1 mRNA sequence 153 4e-34
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
13dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic D... 125 1e-25
14gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence 88 2e-14
15emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 50 0.005
16gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynth... 44 0.28
17emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-9... 44 0.28
18gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 42 1.1
19gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds 42 1.1
20gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin ... 42 1.1
21dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome 42 1.1
22gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.1
23ref|NM_194844.1| Oryza sativa (japonica cultivar-group) putative... 40 4.4
24ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothet... 40 4.4
25ref|NM_193931.1| Oryza sativa (japonica cultivar-group), predic... 40 4.4
26ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 4.4
27gb|BC003324.1| Mus musculus cDNA sequence BC003324, mRNA (cDNA c... 40 4.4
28ref|NM_030259.1| Mus musculus cDNA sequence BC003324 (BC003324),... 40 4.4
29gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosom... 40 4.4
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 4.4
31gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, comple... 40 4.4
32emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chrom... 40 4.4
33gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 4.4
34emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chrom... 40 4.4
35emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete ... 40 4.4
36emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in... 40 4.4
37gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 4.4
38gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, compl... 40 4.4
39gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, comp... 40 4.4
40gb|AF351608.1| Sus scrofa CRY (CRY) mRNA, complete cds 40 4.4
41dbj|AK133760.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 4.4
42gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, c... 40 4.4
43dbj|AK150252.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 4.4
44dbj|AK150123.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 4.4
45gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 4.4
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
47dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
48dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
49gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) ch... 40 4.4
50gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 40 4.4
51ref|NM_213881.1| Sus scrofa CRY protein (CRY), mRNA 40 4.4
52dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 4.4
53dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
54dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.4
55dbj|AK121939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
56dbj|AK103524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
57dbj|AK102729.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
58dbj|AK102295.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
59dbj|AK101329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.4
60gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequ... 40 4.4
61gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 4.4
62gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
63emb|AM114786.1| Platynereis dumerilii mRNA for Pit1 protein 40 4.4
64gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ... 40 4.4
65emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chr... 40 4.4 
>gb|BT008921.1| Triticum aestivum clone wyr1c.pk002.o12:fis, full insert mRNA
            sequence
          Length = 1348

 Score =  442 bits (223), Expect = e-121
 Identities = 313/340 (92%), Gaps = 11/340 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    caccacacatgcttgctttttattaagcgcccacgaggtcacacac---tgacacaagaa 57
            ||||||||||||||||||||||||||||||||||||||||||||||   |||| || |||
Sbjct: 1237 caccacacatgcttgctttttattaagcgcccacgaggtcacacacacttgactcacgaa 1178

                                                                        
Query: 58   ctaaaactcaactcatacctaataataa------aagtgcagctaaactcccctaaaatt 111
            ||||| ||||| |||| |||||||||||      |||||||||||||  | ||||| |||
Sbjct: 1177 ctaaa-ctcaattcatccctaataataataataaaagtgcagctaaaa-ctcctaagatt 1120

                                                                        
Query: 112  caaccccgacggcgcgacacaaggcgtctctagttgctgcccttgctgatgagctccagg 171
            ||||||||| |||||||||||| | |||||||||| ||||||||||||||||||||||||
Sbjct: 1119 caaccccgatggcgcgacacaatgagtctctagttactgcccttgctgatgagctccagg 1060

                                                                        
Query: 172  gcggtggcggtggtgggcagcgccgggatggctcccttcttggtggtgcaaatggcaccg 231
            |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 1059 gcggtggcggtggtgggcagcgccgggatggctcccttcttggtggtgcagatggcgccg 1000

                                                                        
Query: 232  caagcgttcgagaactgcagcacctccctcagcttggcctcattgtaaaagatggagtcg 291
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 999  caagcgttcgagaactgcagcacctccctcagcttggcctcattgtagaagatggagtcg 940

                                                    
Query: 292  tccttggagacattgacgaggagggagccgacgaaggcgt 331
            |||||||||||  |||||||||||||||||||||||||||
Sbjct: 939  tccttggagacgctgacgaggagggagccgacgaaggcgt 900
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>ref|XM_479756.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1314

 Score =  198 bits (100), Expect = 8e-48
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 212  tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 271
            |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 272  cattgtaaaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
            | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909
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>ref|XM_507097.1| PREDICTED Oryza sativa (japonica cultivar-group), P0498H04.29 mRNA
          Length = 1422

 Score =  198 bits (100), Expect = 8e-48
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 212  tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 271
            |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 272  cattgtaaaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
            | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909
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>dbj|AB110164.1| Oryza sativa (japonica cultivar-group) mRNA for fructokinase,
            complete cds, clone: 12FPB009
          Length = 1239

 Score =  198 bits (100), Expect = 8e-48
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1011 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 952

                                                                        
Query: 212  tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 271
            |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 951  tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 892

                                                                        
Query: 272  cattgtaaaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
            | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 891  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 832
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>gb|AF429947.1| Oryza sativa putative fructokinase II mRNA, complete cds
          Length = 1164

 Score =  198 bits (100), Expect = 8e-48
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1046 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 987

                                                                        
Query: 212  tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 271
            |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 986  tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 927

                                                                        
Query: 272  cattgtaaaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
            | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 926  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 867
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>dbj|AK099353.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041J08, full
            insert sequence
          Length = 1315

 Score =  198 bits (100), Expect = 8e-48
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 212  tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 271
            |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 272  cattgtaaaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
            | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909
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>dbj|AK070120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041C07, full
            insert sequence
          Length = 1422

 Score =  198 bits (100), Expect = 8e-48
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152  ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
            ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 1088 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 1029

                                                                        
Query: 212  tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 271
            |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 1028 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 969

                                                                        
Query: 272  cattgtaaaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
            | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 968  cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 909
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>dbj|AK061391.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C10, full
           insert sequence
          Length = 1165

 Score =  198 bits (100), Expect = 8e-48
 Identities = 160/180 (88%)
 Strand = Plus / Minus

                                                                       
Query: 152 ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
           ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 819 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 760

                                                                       
Query: 212 tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcct 271
           |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||  |||
Sbjct: 759 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagcttctcct 700

                                                                       
Query: 272 cattgtaaaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
           | ||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 699 cgttgtggaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 640
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>gb|BT016469.1| Zea mays clone Contig302 mRNA sequence
          Length = 1305

 Score =  153 bits (77), Expect = 4e-34
 Identities = 149/173 (86%)
 Strand = Plus / Plus

                                                                       
Query: 159 gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 218
           |||||| ||| |||||||||||   |||||||||||||||||||| ||||||||||||||
Sbjct: 448 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 507

                                                                       
Query: 219 gcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 278
           ||| ||||| ||||| ||||| |||||||  ||  |||| |  |||||  |||| |||| 
Sbjct: 508 gcagatggcgccgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtg 567

                                                                
Query: 279 aaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
            ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 568 gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 620
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>gb|AY197773.1| Zea mays fructokinase 2 (frk2) mRNA, complete cds
          Length = 1358

 Score =  153 bits (77), Expect = 4e-34
 Identities = 149/173 (86%)
 Strand = Plus / Minus

                                                                        
Query: 159  gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 218
            |||||| ||| |||||||||||   |||||||||||||||||||| ||||||||||||||
Sbjct: 1101 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 1042

                                                                        
Query: 219  gcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 278
            ||| ||||| ||||| ||||| |||||||  ||  |||| |  |||||  |||| |||| 
Sbjct: 1041 gcagatggcgccgcaggcgttggagaacttgagagcctcgcggagcttctcctcgttgtg 982

                                                                 
Query: 279  aaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
             ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 981  gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 929
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>gb|AY112523.1| Zea mays CL966_1 mRNA sequence
          Length = 1528

 Score =  153 bits (77), Expect = 4e-34
 Identities = 149/173 (86%)
 Strand = Plus / Minus

                                                                        
Query: 159  gatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttcttggtggt 218
            |||||| ||| |||||||||||   |||||||||||||||||||| ||||||||||||||
Sbjct: 1103 gatgaggtcctgggcggtggcgaccgtgggcagcgccgggatggcgcccttcttggtggt 1044

                                                                        
Query: 219  gcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagcttggcctcattgta 278
            ||| ||||| ||||| ||||| |||||||  ||  |||| |  |||||  |||| |||| 
Sbjct: 1043 gcagatggcgccgcaggcgttggagaacttgagggcctcgcggagcttctcctcgttgtg 984

                                                                 
Query: 279  aaagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
             ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 983  gaagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 931
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Minus

                                                                          
Query: 152    ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
              ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 697311 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 697252

                                                                     
Query: 212    tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 266
              |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||
Sbjct: 697251 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 697197



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                  
Query: 280    aagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
              ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 697107 aagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 697056
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>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0498H04
          Length = 151046

 Score =  125 bits (63), Expect = 1e-25
 Identities = 102/115 (88%)
 Strand = Plus / Minus

                                                                          
Query: 152    ccttgctgatgagctccagggcggtggcggtggtgggcagcgccgggatggctcccttct 211
              ||||||||||||||||| | |||  ||||  ||||||||||||||||||||| |||||||
Sbjct: 124689 ccttgctgatgagctcctgcgcgacggcgacggtgggcagcgccgggatggcacccttct 124630

                                                                     
Query: 212    tggtggtgcaaatggcaccgcaagcgttcgagaactgcagcacctccctcagctt 266
              |||||||||| ||||| ||||| |||||||||||||  ||| |||||||||||||
Sbjct: 124629 tggtggtgcagatggctccgcacgcgttcgagaacttgagcgcctccctcagctt 124575



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                                  
Query: 280    aagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
              ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 124485 aagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 124434
to top
>gb|AF457962.1| Zea mays clone csi1n.pk0029.c8, mRNA sequence
          Length = 543

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 50/52 (96%)
 Strand = Plus / Minus

                                                               
Query: 280 aagatggagtcgtccttggagacattgacgaggagggagccgacgaaggcgt 331
           ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 467 aagatggagtcgtccttggcgacgttgacgaggagggagccgacgaaggcgt 416
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 163     agctccagggcggtggcggtggtgggcagcgcc 195
               |||||| |||||||||||||| |||||||||||
Sbjct: 3534781 agctcctgggcggtggcggtgttgggcagcgcc 3534749



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    gtgggcagcgccgggatggc 203
              ||||||||||||||||||||
Sbjct: 409411 gtgggcagcgccgggatggc 409430
to top
>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster,
             complete sequence
          Length = 49461

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 166   tccagggcggtggcggtggtgg 187
             ||||||||||||||||||||||
Sbjct: 26035 tccagggcggtggcggtggtgg 26014
to top
>emb|AL132709.5|CNS01DTB Human chromosome 14 DNA sequence BAC R-909M7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 200540

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 183   ggtgggcagcgccgggatggct 204
             ||||||||||||||||||||||
Sbjct: 43941 ggtgggcagcgccgggatggct 43920
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 187     ggcagcgccgggatggctccc 207
               |||||||||||||||||||||
Sbjct: 1879208 ggcagcgccgggatggctccc 1879228
to top
>gb|AY197772.1| Zea mays fructokinase 1 (frk1) mRNA, complete cds
          Length = 1262

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 183 ggtgggcagcgccgggatggctcccttcttggtggtg 219
           ||||||||||| |||||| || |||||||| ||||||
Sbjct: 954 ggtgggcagcgacgggatcgcccccttcttcgtggtg 918
to top
>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
              complete sequence
          Length = 123580

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 306    gacgaggagggagccgacgaa 326
              |||||||||||||||||||||
Sbjct: 118524 gacgaggagggagccgacgaa 118544
to top
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome
          Length = 1738505

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 78     aataataaaagtgcagctaaa 98
              |||||||||||||||||||||
Sbjct: 763422 aataataaaagtgcagctaaa 763442
to top
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 170     gggcggtggcggtggtgggcagcgccggg 198
               |||||||||||| || |||||||||||||
Sbjct: 2040546 gggcggtggcggcggggggcagcgccggg 2040518
to top
>ref|NM_194844.1| Oryza sativa (japonica cultivar-group) putative AUX1-like permease
            (OSJNBb0016M10.2), mRNA
          Length = 1644

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  tgacgaggagggagccgacg 324
            ||||||||||||||||||||
Sbjct: 1201 tgacgaggagggagccgacg 1182
to top
>ref|NM_196736.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0094K20.11), mRNA
          Length = 3093

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 gggcggtggcggtggtgggc 189
           ||||||||||||||||||||
Sbjct: 68  gggcggtggcggtggtgggc 87
to top
>ref|NM_193931.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 492

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 166 tccagggcggtggcggtggtgggc 189
           ||||||||||||||||||| ||||
Sbjct: 368 tccagggcggtggcggtggagggc 391
to top
>ref|XM_361361.1| Magnaporthe grisea 70-15 predicted protein (MG03835.4) partial mRNA
          Length = 570

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 169 agggcggtggcggtggtggg 188
           ||||||||||||||||||||
Sbjct: 154 agggcggtggcggtggtggg 135
to top
>gb|BC003324.1| Mus musculus cDNA sequence BC003324, mRNA (cDNA clone MGC:7036
           IMAGE:3156139), complete cds
          Length = 1278

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ctgcagcacctccctcagct 265
           ||||||||||||||||||||
Sbjct: 546 ctgcagcacctccctcagct 527
to top
>ref|NM_030259.1| Mus musculus cDNA sequence BC003324 (BC003324), mRNA
          Length = 1278

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ctgcagcacctccctcagct 265
           ||||||||||||||||||||
Sbjct: 546 ctgcagcacctccctcagct 527
to top
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence
          Length = 225376

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    ctgcagcacctccctcagct 265
              ||||||||||||||||||||
Sbjct: 212222 ctgcagcacctccctcagct 212241
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     tgacgaggagggagccgacg 324
               ||||||||||||||||||||
Sbjct: 7618675 tgacgaggagggagccgacg 7618656
to top
>gb|AC127313.3| Mus musculus BAC clone RP23-311A21 from 5, complete sequence
          Length = 195651

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   ctgcagcacctccctcagct 265
             ||||||||||||||||||||
Sbjct: 45944 ctgcagcacctccctcagct 45963
to top
>emb|AL356632.12| Human DNA sequence from clone RP11-7D5 on chromosome 10 Contains a
             ribosomal protein S3A (RPS3A) pseudogene, the PYCS gene
             for pyrroline-5-carboxylate synthetase (glutamate
             gamma-semialdehyde synthetase) (GSAS, P5CS), the gene for
             a novel protein (DKFZP564D116, FLJ40976), the 5' end of
             the ENTPD1 gene for ectonucleoside triphosphate
             diphosphohydrolase 1 and two CpG islands, complete
             sequence
          Length = 163166

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                         
Query: 174   ggtggcggtggtgggcagcgccgggatg 201
             |||||||||||||| |||||||||||||
Sbjct: 89870 ggtggcggtggtgg-cagcgccgggatg 89844
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 153     cttgctgatgagctccaggg 172
               ||||||||||||||||||||
Sbjct: 1611806 cttgctgatgagctccaggg 1611825
to top
>emb|AL138889.9| Human DNA sequence from clone RP3-468B3 on chromosome 6 Contains the 5'
             end of the MLN gene for motilin, part of a novel gene and
             a CpG island, complete sequence
          Length = 136886

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    taaaagtgcagctaaactcc 102
             ||||||||||||||||||||
Sbjct: 17442 taaaagtgcagctaaactcc 17423
to top
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29
          Length = 293050

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   cgaggagggagccgacgaag 327
             ||||||||||||||||||||
Sbjct: 73857 cgaggagggagccgacgaag 73876
to top
>emb|CR855302.6| Zebrafish DNA sequence from clone CH211-120A5 in linkage group 3,
              complete sequence
          Length = 182196

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     ctaaaactcaactcatacctaata 81
              |||||||||||||||||| |||||
Sbjct: 159990 ctaaaactcaactcatacataata 160013
to top
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0096L14, from chromosome 3, complete sequence
          Length = 131142

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tgacgaggagggagccgacg 324
             ||||||||||||||||||||
Sbjct: 96615 tgacgaggagggagccgacg 96634
to top
>gb|AC113416.2| Homo sapiens chromosome 5 clone RP11-560F8, complete sequence
          Length = 190848

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     atgcttgctttttattaagc 28
             ||||||||||||||||||||
Sbjct: 12985 atgcttgctttttattaagc 12966
to top
>gb|AC113380.2| Homo sapiens chromosome 5 clone RP11-304B20, complete sequence
          Length = 143534

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     atgcttgctttttattaagc 28
             ||||||||||||||||||||
Sbjct: 29580 atgcttgctttttattaagc 29599
to top
>gb|AF351608.1| Sus scrofa CRY (CRY) mRNA, complete cds
          Length = 1513

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 ggtggcggtggtgggcagcg 193
           ||||||||||||||||||||
Sbjct: 68  ggtggcggtggtgggcagcg 87
to top
>dbj|AK133760.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730407M15 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1335

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ctgcagcacctccctcagct 265
           ||||||||||||||||||||
Sbjct: 678 ctgcagcacctccctcagct 659
to top
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence
          Length = 118101

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tgacgaggagggagccgacg 324
             ||||||||||||||||||||
Sbjct: 12264 tgacgaggagggagccgacg 12283
to top
>dbj|AK150252.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530149F13 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1122

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ctgcagcacctccctcagct 265
           ||||||||||||||||||||
Sbjct: 649 ctgcagcacctccctcagct 630
to top
>dbj|AK150123.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530133F06 product:similar to
           Hypothetical protein FLJ32372 (P40phox binding protein)
           [Homo sapiens], full insert sequence
          Length = 1123

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 ctgcagcacctccctcagct 265
           ||||||||||||||||||||
Sbjct: 650 ctgcagcacctccctcagct 631
to top
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    cggtggcggtggtgggcagc 192
              ||||||||||||||||||||
Sbjct: 165052 cggtggcggtggtgggcagc 165033
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 170      gggcggtggcggtggtgggc 189
                ||||||||||||||||||||
Sbjct: 15607308 gggcggtggcggtggtgggc 15607327



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     tgacgaggagggagccgacg 324
               ||||||||||||||||||||
Sbjct: 2831232 tgacgaggagggagccgacg 2831251
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 305     tgacgaggagggagccgacg 324
               ||||||||||||||||||||
Sbjct: 7616510 tgacgaggagggagccgacg 7616491
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 166      tccagggcggtggcggtggtgggc 189
                ||||||||||||||||||| ||||
Sbjct: 15974811 tccagggcggtggcggtggagggc 15974788
to top
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20,
             complete sequence
          Length = 193119

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gggcggtggcggtggtgggc 189
             ||||||||||||||||||||
Sbjct: 94674 gggcggtggcggtggtgggc 94693
to top
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   cagggcggtggcggtggtgg 187
             ||||||||||||||||||||
Sbjct: 70283 cagggcggtggcggtggtgg 70264
to top
>ref|NM_213881.1| Sus scrofa CRY protein (CRY), mRNA
          Length = 1513

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 ggtggcggtggtgggcagcg 193
           ||||||||||||||||||||
Sbjct: 68  ggtggcggtggtgggcagcg 87
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 170     gggcggtggcggtggtgggcagcg 193
               |||||| |||||||||||||||||
Sbjct: 1986506 gggcggaggcggtggtgggcagcg 1986529
to top
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0091E23
          Length = 155939

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 166   tccagggcggtggcggtggtgggc 189
             ||||||||||||||||||| ||||
Sbjct: 66396 tccagggcggtggcggtggagggc 66373
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 171     ggcggtggcggtggtgggcagcgc 194
               |||||||||||||| |||||||||
Sbjct: 5988162 ggcggtggcggtggcgggcagcgc 5988185
to top
>dbj|AK121939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107D06, full
           insert sequence
          Length = 3100

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 gggcggtggcggtggtgggc 189
           ||||||||||||||||||||
Sbjct: 204 gggcggtggcggtggtgggc 223
to top
>dbj|AK103524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131K12, full
            insert sequence
          Length = 1964

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  tgacgaggagggagccgacg 324
            ||||||||||||||||||||
Sbjct: 1284 tgacgaggagggagccgacg 1265
to top
>dbj|AK102729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O21, full
            insert sequence
          Length = 2015

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  tgacgaggagggagccgacg 324
            ||||||||||||||||||||
Sbjct: 1321 tgacgaggagggagccgacg 1302
to top
>dbj|AK102295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L08, full
            insert sequence
          Length = 2106

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  tgacgaggagggagccgacg 324
            ||||||||||||||||||||
Sbjct: 1326 tgacgaggagggagccgacg 1307
to top
>dbj|AK101329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034G17, full
           insert sequence
          Length = 1153

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 305 tgacgaggagggagccgacg 324
           ||||||||||||||||||||
Sbjct: 492 tgacgaggagggagccgacg 473
to top
>gb|DQ322651.1| Streptomyces sp. FR1 plasmid pFRL1, complete sequence
          Length = 54288

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 160   atgagctccagggcggtggcggtg 183
             |||||||||||||||||| |||||
Sbjct: 26497 atgagctccagggcggtgtcggtg 26474
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     cggtggcggtggtgggcagc 192
               ||||||||||||||||||||
Sbjct: 4065930 cggtggcggtggtgggcagc 4065911
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 170      gggcggtggcggtggtgggc 189
                ||||||||||||||||||||
Sbjct: 15615549 gggcggtggcggtggtgggc 15615568



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 305     tgacgaggagggagccgacg 324
               ||||||||||||||||||||
Sbjct: 2831183 tgacgaggagggagccgacg 2831202
to top
>emb|AM114786.1| Platynereis dumerilii mRNA for Pit1 protein
          Length = 1474

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 ctccctcagcttggcctcat 274
           ||||||||||||||||||||
Sbjct: 745 ctccctcagcttggcctcat 726
to top
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     tcatacctaataataaaagt 89
              ||||||||||||||||||||
Sbjct: 115986 tcatacctaataataaaagt 115967
to top
>emb|AL845548.7| Mouse DNA sequence from clone RP23-307N14 on chromosome 2, complete
              sequence
          Length = 142263

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     catacctaataataaaagtg 90
              ||||||||||||||||||||
Sbjct: 103740 catacctaataataaaagtg 103721


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,354,399
Number of Sequences: 3902068
Number of extensions: 3354399
Number of successful extensions: 80995
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 80210
Number of HSP's gapped (non-prelim): 783
length of query: 331
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 309
effective length of database: 17,147,199,772
effective search space: 5298484729548
effective search space used: 5298484729548
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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