Clone Name | rbart59c04 |
---|---|
Clone Library Name | barley_pub |
>O1002_MOUSE (Q8VFK2) Olfactory receptor 1002 (Olfactory receptor 175-2)| Length = 318 Score = 30.0 bits (66), Expect = 1.5 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 13/77 (16%) Frame = -3 Query: 232 RYLSIIKPILY-----MRACVVHVVRAR-----TTLLRDESIMYE*YCMVQLLNLF---L 92 RY++I KP+LY R CV V+ +T++ S YC L+N F L Sbjct: 122 RYVAICKPLLYTLIMSQRVCVQLVIGPYSIGLISTVVHTTSAFILPYCGPNLINHFFCDL 181 Query: 91 LCIFMMYMHDMHMNKYV 41 L + + D MNK++ Sbjct: 182 LPVLSLACADTQMNKHL 198
>SPA4L_MOUSE (Q9DA32) Sperm-associated antigen 4-like protein| Length = 348 Score = 29.3 bits (64), Expect = 2.5 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -3 Query: 118 MVQLLNLFLLCIFMMYMHDMHMNKYVSVW 32 +++ + L +LC+F +M MH+ V VW Sbjct: 74 VMEKMGLLVLCVFGFWMFSMHLPSKVEVW 102
>UR2R_HUMAN (Q9UKP6) Urotensin II receptor (UR-II-R) (G-protein coupled| receptor 14) Length = 389 Score = 28.1 bits (61), Expect = 5.5 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Frame = +3 Query: 120 QYHSYIMLSSRSRVVRALTTCTTHARMYSMGLIILR*RTLCGCSYSDH------GLASGS 281 QYH + +R+V LTTC T+ + + TL +Y DH G SG Sbjct: 282 QYHQAPLAPRTARIVNYLTTCLTYGNSCANPFLY----TLLTRNYRDHLRGRVRGPGSGG 337 Query: 282 GK 287 G+ Sbjct: 338 GR 339
>UD13_RAT (Q64637) UDP-glucuronosyltransferase 1-3 precursor (EC 2.4.1.17)| (UDPGT) (UGT1*3) (UGT1-03) (UGT1.3) (UGT1A3) (B3) Length = 531 Score = 27.7 bits (60), Expect = 7.2 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 222 VLSNPYYTCARVLYMSLEPALLYFVTRALC 133 VL++P++ C VL M L ++F+ LC Sbjct: 146 VLTDPFFPCGAVLAMYLRVPAVFFLQSMLC 175
>UD15_HUMAN (P35504) UDP-glucuronosyltransferase 1-5 precursor (EC 2.4.1.17)| (UDP-glucuronosyltransferase 1A5) (UDPGT) (UGT1*5) (UGT1-05) (UGT1.5) (UGT-1E) (UGT1E) Length = 534 Score = 27.3 bits (59), Expect = 9.4 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -1 Query: 222 VLSNPYYTCARVLYMSLEPALLYFVTRALCMSDTAWCSCSICSFYV 85 VL++P++ CA VL L ++F+ C D C S Y+ Sbjct: 149 VLTDPFHLCAAVLAKYLSIPAVFFLRNIPCDLDFKGTQCPNPSSYI 194
>Y3428_MYCTU (Q50700) Putative transposase Rv3428c| Length = 410 Score = 27.3 bits (59), Expect = 9.4 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -1 Query: 153 FVTRALCMSDTAWCSCSICSF 91 FV + M TAWC+C + +F Sbjct: 86 FVRPVIRMDQTAWCACHVAAF 106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 44,559,972 Number of Sequences: 219361 Number of extensions: 763704 Number of successful extensions: 1582 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1547 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1582 length of database: 80,573,946 effective HSP length: 94 effective length of database: 59,954,012 effective search space used: 1438896288 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)