>ODFP_MOUSE (Q61999) Outer dense fiber protein|
          Length = 247

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 280 IHPWTSTDLQLVVYVICFIIYHRSC*FC*ALHMCVACTYLCVW*YRLYC 134
           +HP+   DL    Y +C+    RSC  C   + C  C       Y+LYC
Sbjct: 41  MHPYCCCDLHPYPYCLCYSKRSRSCGLCDLYYPCCLCD------YKLYC 83

>ODFP_RAT (P21769) Outer dense fiber protein (Protein RT7) (RTS 5/1)|
          Length = 245

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 280 IHPWTSTDLQLVVYVICFIIYHRSC*FC*ALHMCVACTYLCVW*YRLYC 134
           +HP+   DL    Y +C+    RSC  C   + C  C       Y+LYC
Sbjct: 41  MHPYCCCDLHPYPYCLCYSKRSRSCGLCDLYYPCCLCD------YKLYC 83

>ODFP_HUMAN (Q14990) Outer dense fiber protein|
          Length = 250

 Score = 32.0 bits (71), Expect = 0.40
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = -2

Query: 280 IHPWTSTDLQLVVYVICFIIYHRSC*FC*ALHMCVACTYLCVW*YRLYC 134
           +HP+   DL    Y +C+    RSC  C  L+ C  C       Y+LYC
Sbjct: 41  MHPYCCCDLHPYPYCLCYSKRSRSCGLC-DLYPCCLCD------YKLYC 82

>FIXG_RHIME (P18396) Nitrogen fixation protein fixG|
          Length = 524

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 172 CTYLCVW*YRLYCCLSSN*LTVLYDPWNG 86
           CTY+C W       L  N L V Y+ W G
Sbjct: 232 CTYMCPWPRIQAAMLDENSLVVTYNDWRG 260

>ODFP_PIG (Q29077) Outer dense fiber protein|
          Length = 262

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 280 IHPWTSTDLQLVVYVICFIIYHRSC*FC*ALHMCVACTYLCVW*YRLYC 134
           +HP+   DL    Y +C+    RSC  C  L+ C  C        +LYC
Sbjct: 41  MHPYCCCDLHPYPYCLCYSKRSRSCGLC-DLYPCCLCD------VKLYC 82

>ODFP_BOVIN (Q29438) Outer dense fiber protein|
          Length = 262

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 280 IHPWTSTDLQLVVYVICFIIYHRSC*FC*ALHMCVACTYLCVW*YRLYC 134
           +HP+   DL    Y +C+    RSC  C  L+ C  C        +LYC
Sbjct: 41  MHPYCCCDLHPYPYCLCYSKRSRSCGLC-DLYPCCLCD------VKLYC 82

>AEGA_ECOLI (P37127) Protein aegA|
          Length = 659

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +2

Query: 143 TILPHAQIRTRNT-HM*SLAKLARAMVNYEANNVYD*L*ISTSPWMDCRSCMQACAY 310
           T++ H Q R+  T H    A  AR+  N   ++V D + ++    + C+SC+ AC +
Sbjct: 43  TVIKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPF 99

>NORM_VIBCH (Q9KRU4) Multidrug resistance protein norM (Na(+)/drug antiporter)|
           (Multidrug-efflux transporter)
          Length = 457

 Score = 27.7 bits (60), Expect = 7.6
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
 Frame = -3

Query: 306 AHACMHDLQSI---HGLVLIYS*SYTLFAS*FTIALASFAKLYICVLRVRICACGSI--- 145
           A AC+  L ++     + L+Y+ +  + A    + L  FA +Y C+  V++ A GS+   
Sbjct: 323 ATACITALLTVLFREQIALLYTENQVVVA--LAMQLLLFAAIYQCMDAVQVVAAGSLRGY 380

Query: 144 -VCTAACHRTSLRY 106
              TA  HRT + Y
Sbjct: 381 KDMTAIFHRTFISY 394


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,313,822
Number of Sequences: 219361
Number of extensions: 756673
Number of successful extensions: 1730
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1730
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)