Clone Name | rbart59b09 |
---|---|
Clone Library Name | barley_pub |
>SPA4L_MOUSE (Q9DA32) Sperm-associated antigen 4-like protein| Length = 348 Score = 29.6 bits (65), Expect = 1.9 Identities = 10/29 (34%), Positives = 18/29 (62%) Frame = -1 Query: 125 MVQLLNLFLLCIFMMYMHDMHMSKYVSVW 39 +++ + L +LC+F +M MH+ V VW Sbjct: 74 VMEKMGLLVLCVFGFWMFSMHLPSKVEVW 102
>UR2R_HUMAN (Q9UKP6) Urotensin II receptor (UR-II-R) (G-protein coupled| receptor 14) Length = 389 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Frame = +1 Query: 127 QYHSYIMLSSRSRVVRALTTCTTHARMYSMGLIILR*RTLCGCSYSDH------GLASGS 288 QYH + +R+V LTTC T+ + + TL +Y DH G SG Sbjct: 282 QYHQAPLAPRTARIVNYLTTCLTYGNSCANPFLY----TLLTRNYRDHLRGRVRGPGSGG 337 Query: 289 GK 294 G+ Sbjct: 338 GR 339
>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF| 2) (6-deoxyerythronolide B synthase II) (DEBS 2) Length = 3566 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = +2 Query: 251 GVATPIMAWPLAQENGTRASGARATRLWETAAFRASGP 364 GV TP W L +E G SG R W+ A P Sbjct: 44 GVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDP 81
>O1002_MOUSE (Q8VFK2) Olfactory receptor 1002 (Olfactory receptor 175-2)| Length = 318 Score = 28.1 bits (61), Expect = 5.4 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 13/77 (16%) Frame = -1 Query: 239 RYLSIIKPILY-----MRACVVHVVRAR-----TTLLRDESIMYE*YCMVQLLNLF---L 99 RY++I KP+LY R CV V+ +T++ S YC L+N F L Sbjct: 122 RYVAICKPLLYTLIMSQRVCVQLVIGPYSIGLISTVVHTTSAFILPYCGPNLINHFFCDL 181 Query: 98 LCIFMMYMHDMHMSKYV 48 L + + D M+K++ Sbjct: 182 LPVLSLACADTQMNKHL 198
>UL49_SHV21 (Q01046) Gene 66 protein| Length = 435 Score = 27.7 bits (60), Expect = 7.1 Identities = 16/69 (23%), Positives = 30/69 (43%) Frame = +1 Query: 52 YLLMCISCIYIMNIHKRNRLSSCTMQYHSYIMLSSRSRVVRALTTCTTHARMYSMGLIIL 231 ++++CI C + +N R S + + + R + ++ T C T R+Y Sbjct: 301 HIIVCIECGHCLNF---GRGKSKNLNFPPTHVFYCRDQKIKQFTICGTSGRIYC------ 351 Query: 232 R*RTLCGCS 258 + CGCS Sbjct: 352 ---SYCGCS 357
>UD13_RAT (Q64637) UDP-glucuronosyltransferase 1-3 precursor (EC 2.4.1.17)| (UDPGT) (UGT1*3) (UGT1-03) (UGT1.3) (UGT1A3) (B3) Length = 531 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 Query: 229 VLSNPYYTCARVLYMSLEPALLYFVTRALC 140 VL++P++ C VL M L ++F+ LC Sbjct: 146 VLTDPFFPCGAVLAMYLRVPAVFFLQSMLC 175
>Y3428_MYCTU (Q50700) Putative transposase Rv3428c| Length = 410 Score = 27.3 bits (59), Expect = 9.3 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 160 FVTRALCMSDTAWCSCSICSF 98 FV + M TAWC+C + +F Sbjct: 86 FVRPVIRMDQTAWCACHVAAF 106
>HEMA_IAHRO (P16998) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain; Hemagglutinin HA2 chain] Length = 565 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 9 NTNTTASVKIPNRNILTHVHIMHIHHEYT*KEQ 107 N+ T +V +PN N ++I IHH T EQ Sbjct: 174 NSYPTLNVTMPNNNNFDKLYIWGIHHPSTNNEQ 206
>HEMA_IAHFO (P16995) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain; Hemagglutinin HA2 chain] Length = 565 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +3 Query: 9 NTNTTASVKIPNRNILTHVHIMHIHHEYT*KEQ 107 N+ T +V +PN N ++I IHH T EQ Sbjct: 174 NSYPTLNVTMPNNNNFDKLYIWGIHHPSTNNEQ 206
>ARGB_SULSO (Q980X0) Acetylglutamate/acetylaminoadipate kinase (EC 2.7.2.8) (EC| 2.7.2.-) (NAG kinase) (AGK) (N-acetyl-L-glutamate/N-acetyl-L-aminoadipate 5-phosphotransferase) Length = 264 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = +3 Query: 78 IHHEYT*KEQIEQLHHAVSLIHNALVTK*SSAGSN 182 I YT KE++E A+SLI+ ++ +K S G N Sbjct: 59 IRSRYTTKEELEVYIMAMSLINKSITSKLCSLGKN 93
>UD15_HUMAN (P35504) UDP-glucuronosyltransferase 1-5 precursor (EC 2.4.1.17)| (UDP-glucuronosyltransferase 1A5) (UDPGT) (UGT1*5) (UGT1-05) (UGT1.5) (UGT-1E) (UGT1E) Length = 534 Score = 27.3 bits (59), Expect = 9.3 Identities = 14/46 (30%), Positives = 22/46 (47%) Frame = -2 Query: 229 VLSNPYYTCARVLYMSLEPALLYFVTRALCMSDTAWCSCSICSFYV 92 VL++P++ CA VL L ++F+ C D C S Y+ Sbjct: 149 VLTDPFHLCAAVLAKYLSIPAVFFLRNIPCDLDFKGTQCPNPSSYI 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,680,682 Number of Sequences: 219361 Number of extensions: 920543 Number of successful extensions: 1903 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1874 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1903 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)