>CUTI_PHYCP (P41754) Putative cutinase (EC 3.1.1.74) (Cutin hydrolase)|
          Length = 210

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = -2

Query: 230 MIPMYASSLSKIYGEVSSVDQFVTSLCFYLFPRFLCVYSSCKMLGSLCG-RIKPYYKTYP 54
           M  M++  +S +     S  Q   S C  L P F+ +YS+  +L +L    + PY  T P
Sbjct: 108 MHDMFSPCISGVANSQHSSSQSPRSHCRSLVPSFIAIYSASVVLCALISCFLDPYETTLP 167

Query: 53  LWATYGC 33
           L     C
Sbjct: 168 LTNVTNC 174

>PRKDC_HUMAN (P78527) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)|
            (DNA-PK catalytic subunit) (DNA-PKcs) (DNPK1) (p460)
          Length = 4128

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -3

Query: 148  FTYFPDFCVCTPHVKCWAACVVALNPIIKLIRCGQHTDAKDGIKLID 8
            F++FP F  C   + C  A +++L+P      C        GI+L++
Sbjct: 2848 FSFFPPFVSCIQDISCQHAALLSLDPAAVSAGCLASLQQPVGIRLLE 2894

>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein|
           stubble-stubbloid) [Contains: Serine proteinase stubble
           non-catalytic chain; Serine proteinase stubble catalytic
           chain]
          Length = 787

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 6   QSISFIPSFASVCCPQRISFIIGFNAT 86
           Q + F P  + +C P+  S +IG NAT
Sbjct: 648 QPLEFAPHVSPICLPETDSLLIGMNAT 674

>PTPRK_MOUSE (P35822) Receptor-type tyrosine-protein phosphatase kappa precursor|
           (EC 3.1.3.48) (Protein-tyrosine phosphatase kappa)
           (R-PTP-kappa)
          Length = 1457

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 116 STHTKIWEIGKNINSLQTGQRKILHHRSYSASLHTSE 226
           + H K+W   +N   +   Q K ++HR ++AS    E
Sbjct: 222 AVHNKLWLQRRNGEDIPVAQTKNINHRRFAASFRLQE 258

>PURA_BRUSU (P65879) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 429

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -2

Query: 83  RIKPYYKTYPLWA--TYGCKGWN 21
           R+KP Y+T P W+  T G + WN
Sbjct: 365 RVKPIYETLPGWSETTAGARSWN 387

>PURA_BRUME (P65878) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 429

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -2

Query: 83  RIKPYYKTYPLWA--TYGCKGWN 21
           R+KP Y+T P W+  T G + WN
Sbjct: 365 RVKPIYETLPGWSETTAGARSWN 387

>PURA_BRUAB (P0C115) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 429

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -2

Query: 83  RIKPYYKTYPLWA--TYGCKGWN 21
           R+KP Y+T P W+  T G + WN
Sbjct: 365 RVKPIYETLPGWSETTAGARSWN 387

>PURA_BRUA2 (Q2YQI5) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 429

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = -2

Query: 83  RIKPYYKTYPLWA--TYGCKGWN 21
           R+KP Y+T P W+  T G + WN
Sbjct: 365 RVKPIYETLPGWSETTAGARSWN 387

>T1SG_MYCPN (P75492) Putative type I restriction enzyme specificity protein|
           MPN285 (S protein) (S.MpnORFGP) (A65_orf306)
          Length = 306

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -2

Query: 122 VYSSCKMLGSLCGRIKPY--YKTYPLWATYGCKGWNKTYR 9
           VYSS    G L G+I  Y  +  Y  W T G    N  YR
Sbjct: 148 VYSSATTNGGLIGKINDYDFHGEYVTWTTGGAHAGNVFYR 187

>PTPRK_HUMAN (Q15262) Receptor-type tyrosine-protein phosphatase kappa precursor|
           (EC 3.1.3.48) (Protein-tyrosine phosphatase kappa)
           (R-PTP-kappa)
          Length = 1439

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +2

Query: 116 STHTKIWEIGKNINSLQTGQRKILHHRSYSASLHTSE 226
           + H K+W   +N   +   Q K ++HR ++AS    E
Sbjct: 223 AVHNKLWLQRRNGEDIPVAQTKNINHRRFAASFRLQE 259

>HST1_YEAST (P53685) NAD-dependent deacetylase HST1 (EC 3.5.1.-) (Homologous to|
           SIR2 protein 1)
          Length = 503

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 272 CHWDTSHRRREDLNMIPMYASSLSK 198
           CHWD  H++ +DL  I    + + K
Sbjct: 465 CHWDIPHKKWQDLKKIDYNCTEIDK 489

>PRKDC_MOUSE (P97313) DNA-dependent protein kinase catalytic subunit (EC 2.7.11.1)|
            (DNA-PK catalytic subunit) (DNA-PKcs) (P460)
          Length = 4128

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 12/47 (25%), Positives = 20/47 (42%)
 Frame = -3

Query: 148  FTYFPDFCVCTPHVKCWAACVVALNPIIKLIRCGQHTDAKDGIKLID 8
            F +FP F  C   + C     + L+P    + C        GI+L++
Sbjct: 2849 FLFFPPFVSCIQEISCQHPDFLTLDPASVRVGCLASLQQPGGIRLLE 2895

>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
            protein 2C (EC 1.14.11.-) (Jumonji domain-containing
            protein 1C)
          Length = 2350

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 320  HEDQAQRLHGKIP*HLCHWDTSH 252
            H+ +++ L GKIP HL H   SH
Sbjct: 963  HQPESESLVGKIPDHLPHQSASH 985

>HUL5_YEAST (P53119) Probable ubiquitin-protein ligase HUL5 (EC 6.3.2.-)|
          Length = 910

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
 Frame = -2

Query: 275 LCHWDTSHRRREDLNMIPMY------ASSLSKIYGEVSSVDQFVTSLCFYLFPRFLCVYS 114
           L  +  S   R+ L+++ +Y      A +LS +  +  +VD+F+ SL  YL       YS
Sbjct: 104 LSSYPNSLGNRQLLSLLKLYQDDALVAETLSDLNMDCPTVDEFLDSLSVYLCRASFLSYS 163

Query: 113 SCKMLGSL 90
           S   L  +
Sbjct: 164 SASKLADV 171


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,463,705
Number of Sequences: 219361
Number of extensions: 1091942
Number of successful extensions: 2217
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2217
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)