>gb|AC105285.3| Homo sapiens BAC clone RP11-10K16 from 4, complete sequence
          Length = 156635

 Score = 42.1 bits (21), Expect = 0.13
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 8      atgccccattattatttttgc 28
              |||||||||||||||||||||
Sbjct: 134896 atgccccattattatttttgc 134916

>gb|AC079380.6| Homo sapiens BAC clone RP11-427M20 from 4, complete sequence
          Length = 166166

 Score = 40.1 bits (20), Expect = 0.52
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 8     atgccccattattatttttg 27
             ||||||||||||||||||||
Sbjct: 54856 atgccccattattatttttg 54875

>gb|AC164011.2| Mus musculus chromosome 18, clone RP24-190N20, complete sequence
          Length = 167980

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 8      atgccccattattattttt 26
              |||||||||||||||||||
Sbjct: 107148 atgccccattattattttt 107166

>gb|BC072038.1| Xenopus laevis hypothetical protein MGC82406, mRNA (cDNA clone
            MGC:78886 IMAGE:4174082), complete cds
          Length = 3183

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 17   tattatttttgcccaattaacaa 39
            |||||||||||||||||| ||||
Sbjct: 1664 tattatttttgcccaatttacaa 1686

>gb|BC072273.1| Xenopus laevis hypothetical protein MGC82406, mRNA (cDNA clone
            MGC:82406 IMAGE:4632623), complete cds
          Length = 3187

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 17   tattatttttgcccaattaacaa 39
            |||||||||||||||||| ||||
Sbjct: 1683 tattatttttgcccaatttacaa 1705

>emb|AL390791.15| Human DNA sequence from clone RP11-204A14 on chromosome 9, complete
             sequence
          Length = 177425

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    cattattatttttgcccaa 32
             |||||||||||||||||||
Sbjct: 12326 cattattatttttgcccaa 12308

>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3'
              end of the CDK5RAP2 gene for CDK5 regulatory subunit
              associated protein 2 (C48), complete sequence
          Length = 148875

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 7      catgccccattattatttttgcc 29
              ||||||||||||||||| |||||
Sbjct: 119041 catgccccattattattgttgcc 119063

>gb|AC072026.13| Homo sapiens 3 BAC RP11-500K19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 131266

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 21    atttttgcccaattaacaa 39
             |||||||||||||||||||
Sbjct: 22886 atttttgcccaattaacaa 22868

>gb|AC092754.4| Homo sapiens chromosome 15 clone RP11-112N19 map 15q22, complete
             sequence
          Length = 173411

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 18    attatttttgcccaattaacaac 40
             ||||||||| |||||||||||||
Sbjct: 20121 attattttttcccaattaacaac 20143

>emb|AL355922.4|CNS05TD4 Human chromosome 14 DNA sequence BAC R-84C10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157979

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 32     attaacaactttaacccttgtac 54
              ||||||||| |||||||||||||
Sbjct: 153081 attaacaacattaacccttgtac 153103

>emb|AL133371.3|CNS01DUW Human chromosome 14 DNA sequence BAC R-219E7 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 162472

 Score = 38.2 bits (19), Expect = 2.1
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 32     attaacaactttaacccttgtac 54
              ||||||||| |||||||||||||
Sbjct: 102426 attaacaacattaacccttgtac 102404

>gb|DQ215654.1| Taeniopygia guttata clone 0058P0039G02 propionyl Coenzyme A
           carboxylase alpha polypeptide-like mRNA, complete
           sequence
          Length = 721

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                             
Query: 40  ctttaacccttgtacaaa 57
           ||||||||||||||||||
Sbjct: 122 ctttaacccttgtacaaa 139

>gb|BC075186.1| Xenopus laevis MGC82149 protein, mRNA (cDNA clone MGC:82149
            IMAGE:7012413), complete cds
          Length = 2698

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 18   attatttttgcccaattaacaa 39
            ||||||||||||||||| ||||
Sbjct: 1703 attatttttgcccaatttacaa 1724

>gb|AC133165.3| Mus musculus BAC clone RP24-357P16 from chromosome 13, complete
             sequence
          Length = 181278

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 32    attaacaactttaaccct 49
             ||||||||||||||||||
Sbjct: 72990 attaacaactttaaccct 73007

>gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence
          Length = 175721

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 11    ccccattattatttttgc 28
             ||||||||||||||||||
Sbjct: 80537 ccccattattatttttgc 80554

>ref|XM_723832.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY01200)
            partial mRNA
          Length = 3489

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 28   cccaattaacaactttaa 45
            ||||||||||||||||||
Sbjct: 1896 cccaattaacaactttaa 1879

>ref|XM_674928.1| Plasmodium berghei strain ANKA erythrocyte membrane-associated
            antigen (PB000800.03.0) partial mRNA
          Length = 4443

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 6    acatgccccattattatt 23
            ||||||||||||||||||
Sbjct: 1857 acatgccccattattatt 1840

>emb|AL035465.4|HS197K23 Human DNA sequence from clone RP1-197K23 on chromosome 6q22.2-23.3
             Contains part of the PTPRK gene for protein tyrosine
             phosphatase receptor type K (R-PTP-KAPPA) and the 5' end
             of a novel gene, complete sequence
          Length = 48634

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 24/26 (92%)
 Strand = Plus / Minus

                                       
Query: 31    aattaacaactttaacccttgtacaa 56
             ||||| |||||||||||||| |||||
Sbjct: 33258 aattaccaactttaacccttttacaa 33233

>emb|AL772193.5| Zebrafish DNA sequence from clone CH211-194C5 in linkage group 7 Contains
              a novel gene similar to PPP1R14B (protein phosphatase 1,
              regulatory (inhibitor) subunit 14B), a novel gene similar
              to BRMS1 (breast cancer metastasis-suppressor 1 (BRMS1),
              the pc gene for pyruvate carboxylase and three putative
              novel retrotransposons, complete sequence
          Length = 192531

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 15     attattatttttgcccaattaa 36
              ||||||||||||||| ||||||
Sbjct: 147617 attattatttttgcctaattaa 147596

>emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in linkage group 19 Contains
              part of a novel gene similar to CSMD (CUB and sushi
              multiple domains protein), complete sequence
          Length = 161104

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 11     ccccattattatttttgc 28
              ||||||||||||||||||
Sbjct: 145119 ccccattattatttttgc 145136

>emb|CR932960.3| Medicago truncatula chromosome 5 clone mth4-7a5, COMPLETE SEQUENCE
          Length = 199033

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 16     ttattatttttgcccaat 33
              ||||||||||||||||||
Sbjct: 181396 ttattatttttgcccaat 181413

>gb|AC140068.18| Medicago truncatula clone mth2-15l24, complete sequence
          Length = 111620

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 16    ttattatttttgcccaat 33
             ||||||||||||||||||
Sbjct: 81108 ttattatttttgcccaat 81091

>gb|AC021035.8| Homo sapiens chromosome 10 clone RP11-381K7, complete sequence
          Length = 173791

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 13    ccattattatttttgccc 30
             ||||||||||||||||||
Sbjct: 63843 ccattattatttttgccc 63860

>gb|AC091997.3| Homo sapiens chromosome 5 clone RP11-96K8, complete sequence
          Length = 143244

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 36     acaactttaacccttgta 53
              ||||||||||||||||||
Sbjct: 112659 acaactttaacccttgta 112676

>gb|AC024791.1| Caenorhabditis elegans cosmid Y47G6A, complete sequence
          Length = 194322

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 20     tatttttgcccaattaac 37
              ||||||||||||||||||
Sbjct: 147114 tatttttgcccaattaac 147097

>gb|AC008449.6| Homo sapiens chromosome 5 clone CTC-341A9, complete sequence
          Length = 124405

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 15    attattatttttgcccaattaa 36
             ||||||||||||||||| ||||
Sbjct: 57565 attattatttttgcccatttaa 57586

>gb|AC159504.5| Mus musculus 10 BAC RP23-302J6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 201259

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 41    tttaacccttgtacaaaa 58
             ||||||||||||||||||
Sbjct: 76372 tttaacccttgtacaaaa 76389

>emb|BX571880.6| Zebrafish DNA sequence from clone DKEY-29L4 in linkage group 15,
             complete sequence
          Length = 194220

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 34    taacaactttaacccttgtaca 55
             ||||||||||||||||| ||||
Sbjct: 19266 taacaactttaacccttataca 19245

>emb|BX470085.6| Zebrafish DNA sequence from clone DKEY-238K17 in linkage group 20,
             complete sequence
          Length = 107263

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 15    attattatttttgcccaattaa 36
             ||||||||||||||| ||||||
Sbjct: 27803 attattatttttgcctaattaa 27824

>emb|BX927361.31| Zebrafish DNA sequence from clone CH211-121K8 in linkage group 9,
              complete sequence
          Length = 177986

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 15     attattatttttgcccaattaa 36
              ||||| ||||||||||||||||
Sbjct: 143491 attataatttttgcccaattaa 143470

>gb|L43967.2| Mycoplasma genitalium G37, complete genome
          Length = 580076

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 27     gcccaattaacaacttta 44
              ||||||||||||||||||
Sbjct: 151498 gcccaattaacaacttta 151515

>emb|CR352286.6| Zebrafish DNA sequence from clone CH211-93A20 in linkage group 19,
              complete sequence
          Length = 147941

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 14     cattattatttttgccca 31
              ||||||||||||||||||
Sbjct: 146792 cattattatttttgccca 146809

>emb|AL611936.11| Mouse DNA sequence from clone RP23-40G2 on chromosome 4, complete
             sequence
          Length = 166167

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 5     aacatgccccattattattttt 26
             ||||||||||||| ||||||||
Sbjct: 15319 aacatgccccatttttattttt 15298

>emb|AL772239.8| Mouse DNA sequence from clone RP23-179O4 on chromosome 2, complete
              sequence
          Length = 233097

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 35     aacaactttaacccttgt 52
              ||||||||||||||||||
Sbjct: 164784 aacaactttaacccttgt 164767

>emb|AL929312.4| Mouse DNA sequence from clone RP23-463G15 on chromosome 2, complete
             sequence
          Length = 165121

 Score = 36.2 bits (18), Expect = 8.2
 Identities = 24/26 (92%)
 Strand = Plus / Plus

                                       
Query: 18    attatttttgcccaattaacaacttt 43
             ||||||||||||||| ||| ||||||
Sbjct: 69715 attatttttgcccaaataaaaacttt 69740


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 981,432
Number of Sequences: 3902068
Number of extensions: 981432
Number of successful extensions: 63247
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63187
Number of HSP's gapped (non-prelim): 60
length of query: 58
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 37
effective length of database: 17,151,101,840
effective search space: 634590768080
effective search space used: 634590768080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)