>TL29_LYCES (Q9THX6) Putative L-ascorbate peroxidase, chloroplast precursor (EC|
           1.11.1.11) (Thylakoid lumenal 29 kDa protein) (TL29)
           (P29)
          Length = 345

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = -2

Query: 377 PVVLGAAPAPDFLCIKSSNRNPPPPSLVCNRF 282
           P ++   P+P    I +++RNPP P ++C +F
Sbjct: 9   PSLVSFIPSPS--SITNASRNPPQPGMICCKF 38

>HIS82_PSYAR (Q4FQF9) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase 2)
          Length = 377

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 377 PVVLGAAPAPDFLCIKSSNRNPPPPS 300
           P V G  P  D LC  ++N NP PPS
Sbjct: 20  PYVPGEQPQHDDLCKLNTNENPFPPS 45

>ATM_CANGA (Q6FRZ9) Serine/threonine-protein kinase TEL1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase TEL1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2763

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 210  FSSLFRKRMSAASCSDVAATLSQRRIPNQTSACLE 106
            F  + R  +    CSD  + L++ + PNQ+S+ LE
Sbjct: 1192 FIIVMRYALKLCDCSDYTSVLNEMQRPNQSSSLLE 1226

>HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (HAT B)
          Length = 467

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 169 AGGGTHAFPKKRRKKGFSPA 228
           AG GT   PKKRR+ GFSPA
Sbjct: 9   AGPGTE--PKKRRRVGFSPA 26

>LEF7_NPVAC (P41677) Late expression factor 7|
          Length = 226

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 347 DFLCIKSSNRNPPPPSLVCNRFSLSKLPFCIYLAPIL 237
           D+L +  ++ +P     +CN   ++  P   YL P+L
Sbjct: 54  DYLKLTPASYHPTTDQFICNYLGITNQPMAPYLVPLL 90

>Y733_TREPA (O83715) Hypothetical protein TP0733|
          Length = 219

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +1

Query: 4   AIKLLLPLAYSVVRLREHQPNSQTVTTAGAGDEPLQTG*SLIWDSSLRKCRRYIRAGGGT 183
           A+  LLP AYS   +RE  P+           EP++ G  L+    +  C+ YI  G GT
Sbjct: 16  ALSPLLP-AYSSEGVREVPPSQSPQVVVAY--EPIRPGDQLLKIGIVAGCQLYIAGGNGT 72

Query: 184 H 186
           +
Sbjct: 73  N 73

>MASZ_YEAST (P21826) Malate synthase 2, glyoxysomal (EC 2.3.3.9)|
          Length = 554

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 149 FRSEESQIKLQPVWSGSSPAPAVV 78
           F  E  QI+  P W G+ PAP ++
Sbjct: 74  FLPETEQIRNDPTWQGAIPAPGLI 97

>SYIC_YEAST (P09436) Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5)|
           (Isoleucine--tRNA ligase) (IleRS)
          Length = 1072

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = -2

Query: 374 VVLGAAPAPDFLCIKSSNRNPPPPSLVCNRFSLSKLPFCIYLAPIL 237
           +V G   A D   +  S +N P PS+V N++    L   +  +P+L
Sbjct: 590 IVSGIVLAADGRKMSKSLKNYPDPSIVLNKYGADALRLYLINSPVL 635

>PROP1_HUMAN (O75360) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 226

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 11/55 (20%)
 Frame = +1

Query: 133 DSSLRKCRRYIRAGGGTHAF-----------PKKRRKKGFSPASLYKMGAKYIQN 264
           DSS   CRR   AGGG   F            ++R +  FSP  L ++ + + +N
Sbjct: 37  DSSAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRN 91

>PROP1_GORGO (Q3LU39) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 225

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 11/55 (20%)
 Frame = +1

Query: 133 DSSLRKCRRYIRAGGGTHAF-----------PKKRRKKGFSPASLYKMGAKYIQN 264
           DSS   CRR   AGGG   F            ++R +  FSP  L ++ + + +N
Sbjct: 37  DSSAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRN 91

>DOF13_ARATH (Q9LQX4) Hypothetical Dof zinc finger protein DOF1.3 (AtDOF1.3)|
          Length = 366

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = +1

Query: 145 RKCRRYIRAGGGTHAFP---KKRRKKGFSPASLYKMGAKYIQNGSLDNENLLQT 297
           RKC+RY  AGG     P    +R+ KG+  +  Y     +I +   DN N   T
Sbjct: 133 RKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSDQY----LHITSEDTDNYNSSST 182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,057,815
Number of Sequences: 219361
Number of extensions: 1109991
Number of successful extensions: 3095
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3093
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)