Clone Name | rbart59b01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SCNA_DROME (P35500) Sodium channel protein para (Protein paralytic) | 28 | 5.4 | 2 | LEUD_CLOAB (Q97EE1) 3-isopropylmalate dehydratase small subunit ... | 28 | 7.0 |
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>SCNA_DROME (P35500) Sodium channel protein para (Protein paralytic)| Length = 2131 Score = 28.1 bits (61), Expect = 5.4 Identities = 9/23 (39%), Positives = 14/23 (60%) Frame = -3 Query: 162 IIGKTDHICIYDCCFTFLPFSLW 94 I+ D C++DCC+ +L F W Sbjct: 788 ILKGIDVFCVWDCCWVWLKFQEW 810
>LEUD_CLOAB (Q97EE1) 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)| (Isopropylmalate isomerase) (Alpha-IPM isomerase) (IPMI) Length = 163 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +1 Query: 130 VNTDVIRFANNVDTDVI 180 VN DV+++ +N+DTDVI Sbjct: 3 VNGDVLKYGDNIDTDVI 19 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,722,140 Number of Sequences: 219361 Number of extensions: 1056467 Number of successful extensions: 2263 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2236 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2262 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)