>gb|AC009388.5| Drosophila melanogaster clone BACR11P22, complete sequence
          Length = 172362

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    ggcaaaaatgtaaaacaacaa 127
              |||||||||||||||||||||
Sbjct: 116594 ggcaaaaatgtaaaacaacaa 116574

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 210535 ttaattgttacatttcaattcttacaaaa 210507

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 206576 ttaattgttacatttcaattcttacaaaa 206548

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 206577 ttaattgttacatttcaattcttacaaaa 206549

>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 207904 ttaattgttacatttcaattcttacaaaa 207876

>emb|AL121911.15|HSDJ989D7 Human DNA sequence from clone RP5-989D7 on chromosome 20 Contains part
             of a novel gene, complete sequence
          Length = 119790

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 215   cttattgttgagtttaaggag 235
             |||||||||||||||||||||
Sbjct: 26210 cttattgttgagtttaaggag 26230

>gb|AC009389.9|AC009389 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone
             BACR01F12, complete sequence
          Length = 152853

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   ggcaaaaatgtaaaacaacaa 127
             |||||||||||||||||||||
Sbjct: 13792 ggcaaaaatgtaaaacaacaa 13772

>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone
             BACR02L12, complete sequence
          Length = 178931

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 88    acaaaaccatagagaaaatggcaaa 112
             ||||||||||||| |||||||||||
Sbjct: 37588 acaaaaccatagaaaaaatggcaaa 37612

>gb|AE003763.3| Drosophila melanogaster chromosome 3R, section 101 of 118 of the complete
              sequence
          Length = 206189

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    ggcaaaaatgtaaaacaacaa 127
              |||||||||||||||||||||
Sbjct: 112370 ggcaaaaatgtaaaacaacaa 112350

>gb|AE003739.3| Drosophila melanogaster chromosome 3R, section 77 of 118 of the complete
              sequence
          Length = 224856

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 88     acaaaaccatagagaaaatggcaaa 112
              ||||||||||||| |||||||||||
Sbjct: 171098 acaaaaccatagaaaaaatggcaaa 171122

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 65     ttaattgttacatctcaattattacaaaa 93
              ||||||||||||| |||||| ||||||||
Sbjct: 206576 ttaattgttacatttcaattcttacaaaa 206548

>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      ctcaattattacaaaaccat 97
               ||||||||||||||||||||
Sbjct: 2151468 ctcaattattacaaaaccat 2151449

>ref|NM_003708.2| Homo sapiens retinol dehydrogenase 16 (all-trans) (RDH16), mRNA
          Length = 2425

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 tacttagagcagagggtgtg 309
           ||||||||||||||||||||
Sbjct: 400 tacttagagcagagggtgtg 419

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     gagggtgtggatgatctcca 320
               ||||||||||||||||||||
Sbjct: 1738036 gagggtgtggatgatctcca 1738017

>gb|AC005158.3| Homo sapiens BAC clone GS1-250N6 from 7, complete sequence
          Length = 266344

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaacaacaatcgtaaataca 138
              ||||||||||||||||||||
Sbjct: 205041 aaacaacaatcgtaaataca 205022

>gb|AC129315.3| Mus musculus BAC clone RP23-407E2 from chromosome 18, complete sequence
          Length = 183462

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 277   atggaatagagattacttagagca 300
             ||||||||||| ||||||||||||
Sbjct: 67121 atggaatagagtttacttagagca 67098

>emb|AL590244.5| Human DNA sequence from clone RP11-28H17 on chromosome 6 Contains
            the 3' end of a novel gene, part of a novel gene,  a
            novel gene, cytochrome P450 pseudogene and the 3' end of
            the RHAG gene for Rhesus blood group-associated
            glycoprotein (RH50A), complete sequence
          Length = 133579

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   agaataggtgtatatcacct 65
            ||||||||||||||||||||
Sbjct: 1047 agaataggtgtatatcacct 1028

>gb|AC080005.24| Homo sapiens 3 BAC RP11-475N22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 169583

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    ttattgttgagtttaaggag 235
              ||||||||||||||||||||
Sbjct: 107037 ttattgttgagtttaaggag 107056

>gb|AC105201.3| Homo sapiens chromosome 18, clone RP11-244M2, complete sequence
          Length = 151032

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    ttattgttgagtttaaggag 235
              ||||||||||||||||||||
Sbjct: 105232 ttattgttgagtttaaggag 105213

>gb|AC011139.8| Homo sapiens chromosome 18, clone RP11-1I2, complete sequence
          Length = 180360

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   ttattgttgagtttaaggag 235
             ||||||||||||||||||||
Sbjct: 14101 ttattgttgagtttaaggag 14082

>ref|XM_392697.2| PREDICTED: Apis mellifera similar to ENSANGP00000020383
           (LOC409172), mRNA
          Length = 2190

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 239 ttgcaatcaagttgatgatc 258
           ||||||||||||||||||||
Sbjct: 413 ttgcaatcaagttgatgatc 394

>dbj|BA000027.2| Oryzias latipes DNA, MHC Class I Region
          Length = 425935

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    aaaatggcaaaaatgtaaaa 121
              ||||||||||||||||||||
Sbjct: 265609 aaaatggcaaaaatgtaaaa 265590

>gb|AC146165.2| Pan troglodytes BAC clone RP43-36N14 from chromosome 7, complete sequence
          Length = 159324

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aaacaacaatcgtaaataca 138
              ||||||||||||||||||||
Sbjct: 148330 aaacaacaatcgtaaataca 148311

>gb|AC155247.2| Mus musculus BAC clone RP24-302C23 from chromosome 12, complete
             sequence
          Length = 144348

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   gaaaatggcaaaaatgtaaa 120
             ||||||||||||||||||||
Sbjct: 17730 gaaaatggcaaaaatgtaaa 17711

>gb|AC020969.2|AC020969 Mus musculus chromosome 18 clone RP23-19K11, complete sequence
          Length = 179771

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 277   atggaatagagattacttagagca 300
             ||||||||||| ||||||||||||
Sbjct: 82667 atggaatagagtttacttagagca 82690

>emb|CR626902.14| Zebrafish DNA sequence from clone CH211-1F22 in linkage group 1,
            complete sequence
          Length = 130900

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 111  aaaatgtaaaacaacaatcgtaaataca 138
            |||||||||||||| | |||||||||||
Sbjct: 9149 aaaatgtaaaacaaaattcgtaaataca 9176

>gb|AF086735.1|AF086735 Homo sapiens retinol dehydrogenase mRNA, complete cds
          Length = 2425

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 290 tacttagagcagagggtgtg 309
           ||||||||||||||||||||
Sbjct: 400 tacttagagcagagggtgtg 419

>emb|AL591469.9| Mouse DNA sequence from clone RP23-390D17 on chromosome 11, complete
             sequence
          Length = 168981

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   ccatcttcccaaggatcacg 337
             ||||||||||||||||||||
Sbjct: 96421 ccatcttcccaaggatcacg 96440

>emb|AL626776.15| Mouse DNA sequence from clone RP23-73N17 on chromosome 4, complete
             sequence
          Length = 144486

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    catagagaaaatggcaaaaa 114
             ||||||||||||||||||||
Sbjct: 56118 catagagaaaatggcaaaaa 56137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,796,863
Number of Sequences: 3902068
Number of extensions: 3796863
Number of successful extensions: 79332
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79072
Number of HSP's gapped (non-prelim): 260
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)